RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 LTV1Q96GA3 475 aaPredicted RBP12.03□□□□□ -0.48
CPNE4-213ENST00000515418 GCP02774 474 aa12.02□□□□□ -0.49
CPNE4-213ENST00000515418 HOXC9P31274 260 aa12.02□□□□□ -0.49
CPNE4-213ENST00000515418 RIPK4P57078 832 aa12.02□□□□□ -0.49
CPNE4-213ENST00000515418 SBNO1A3KN83 1393 aa12.02□□□□□ -0.49
CPNE4-213ENST00000515418 IQSEC2Q5JU85 1478 aa12.02□□□□□ -0.49
CPNE4-213ENST00000515418 NGEFQ8N5V2 710 aa12.01□□□□□ -0.49
CPNE4-213ENST00000515418 PNNQ9H307 717 aaKnown RBP12.01□□□□□ -0.49
CPNE4-213ENST00000515418 TRIM35Q9UPQ4 493 aa12.01□□□□□ -0.49
CPNE4-213ENST00000515418 TRPM3Q9HCF6 1732 aaPredicted RBP12.01□□□□□ -0.49
CPNE4-213ENST00000515418 KIF1AQ12756 1690 aa12.01□□□□□ -0.49
CPNE4-213ENST00000515418 FLT4P35916 1363 aa12.01□□□□□ -0.49
CPNE4-213ENST00000515418 TRMT2AQ8IZ69 625 aaKnown RBP12.01□□□□□ -0.49
CPNE4-213ENST00000515418 CABLES1Q8TDN4 633 aa12.01□□□□□ -0.49
CPNE4-213ENST00000515418 RCAN3Q9UKA8 241 aa12.01□□□□□ -0.49
CPNE4-213ENST00000515418 EYA1Q99502 592 aa12□□□□□ -0.49
CPNE4-213ENST00000515418 NPHP3Q7Z494 1330 aa12□□□□□ -0.49
CPNE4-213ENST00000515418 KCNH5Q8NCM2 988 aa11.99□□□□□ -0.49
CPNE4-213ENST00000515418 E9PSI1 815 aa11.99□□□□□ -0.49
CPNE4-213ENST00000515418 ZC3H6P61129 1189 aaKnown RBP11.99□□□□□ -0.49
CPNE4-213ENST00000515418 CCDC27Q2M243 656 aa11.99□□□□□ -0.49
CPNE4-213ENST00000515418 USP54Q70EL1 1684 aa11.99□□□□□ -0.49
CPNE4-213ENST00000515418 LTN1O94822 1766 aa11.98□□□□□ -0.49
CPNE4-213ENST00000515418 NEFMP07197 916 aa11.98□□□□□ -0.49
CPNE4-213ENST00000515418 WDR63Q8IWG1 891 aa11.98□□□□□ -0.49
CPNE4-213ENST00000515418 IP6K1Q92551 441 aa11.98□□□□□ -0.49
CPNE4-213ENST00000515418 NFAT5O94916 1531 aa11.98□□□□□ -0.49
CPNE4-213ENST00000515418 ARHGEF25Q86VW2 580 aa11.98□□□□□ -0.49
CPNE4-213ENST00000515418 NFE2L2Q16236 605 aa11.97□□□□□ -0.49
CPNE4-213ENST00000515418 USHBP1Q8N6Y0 703 aa11.97□□□□□ -0.49
CPNE4-213ENST00000515418 THUMPD2Q9BTF0 503 aaKnown RBP11.97□□□□□ -0.49
CPNE4-213ENST00000515418 AXIN2Q9Y2T1 843 aa11.97□□□□□ -0.49
CPNE4-213ENST00000515418 USP19O94966 1318 aa11.96□□□□□ -0.49
CPNE4-213ENST00000515418 SPATA31A3Q5VYP0 1347 aa11.96□□□□□ -0.49
CPNE4-213ENST00000515418 PLIN1O60240 522 aa11.96□□□□□ -0.49
CPNE4-213ENST00000515418 ALS2Q96Q42 1657 aa11.96□□□□□ -0.49
CPNE4-213ENST00000515418 PXDNQ92626 1479 aa11.96□□□□□ -0.5
CPNE4-213ENST00000515418 RNF123Q5XPI4 1314 aa11.96□□□□□ -0.5
CPNE4-213ENST00000515418 FAM83GA6ND36 823 aa11.96□□□□□ -0.5
CPNE4-213ENST00000515418 TSR2Q969E8 191 aaKnown RBP11.96□□□□□ -0.5
CPNE4-213ENST00000515418 DCTN1Q14203 1278 aa11.95□□□□□ -0.5
CPNE4-213ENST00000515418 NCBP3Q53F19 620 aaKnown RBP11.95□□□□□ -0.5
CPNE4-213ENST00000515418 LRRC59Q96AG4 307 aaKnown RBP11.95□□□□□ -0.5
CPNE4-213ENST00000515418 MED1Q15648 1581 aaPredicted RBP11.95□□□□□ -0.5
CPNE4-213ENST00000515418 RGPD1P0DJD0 1748 aa11.94□□□□□ -0.5
CPNE4-213ENST00000515418 NBPF6Q5VWK0 638 aa11.94□□□□□ -0.5
CPNE4-213ENST00000515418 NBPF4Q96M43 638 aa11.94□□□□□ -0.5
CPNE4-213ENST00000515418 KIF24Q5T7B8 1368 aa11.94□□□□□ -0.5
CPNE4-213ENST00000515418 IGSF1Q8N6C5 1336 aa11.94□□□□□ -0.5
CPNE4-213ENST00000515418 DLG5Q8TDM6 1919 aa11.94□□□□□ -0.5
CPNE4-213ENST00000515418 LAS1LQ9Y4W2 734 aaKnown RBP11.94□□□□□ -0.5
CPNE4-213ENST00000515418 SLIT3O75094 1523 aa11.93□□□□□ -0.5
CPNE4-213ENST00000515418 ARHGEF10O15013 1369 aa11.93□□□□□ -0.5
CPNE4-213ENST00000515418 RRP1P56182 461 aaKnown RBP11.93□□□□□ -0.5
CPNE4-213ENST00000515418 CHRNA2Q15822 529 aa11.93□□□□□ -0.5
CPNE4-213ENST00000515418 TNS3Q68CZ2 1445 aa11.93□□□□□ -0.5
CPNE4-213ENST00000515418 SOS2Q07890 1332 aaPredicted RBP11.93□□□□□ -0.5
CPNE4-213ENST00000515418 BCAR3O75815 825 aa11.92□□□□□ -0.5
CPNE4-213ENST00000515418 MTHFSDQ2M296 383 aaKnown RBP11.92□□□□□ -0.5
CPNE4-213ENST00000515418 RGPD2P0DJD1 1756 aa11.92□□□□□ -0.5
CPNE4-213ENST00000515418 RGPD5Q99666 1765 aa11.92□□□□□ -0.5
CPNE4-213ENST00000515418 RTL1A6NKG5 1358 aa11.92□□□□□ -0.5
CPNE4-213ENST00000515418 LTBP4Q8N2S1 1624 aa11.92□□□□□ -0.5
CPNE4-213ENST00000515418 ANKRD24Q8TF21 1146 aa11.92□□□□□ -0.5
CPNE4-213ENST00000515418 MYH16Q9H6N6 1097 aa11.91□□□□□ -0.5
CPNE4-213ENST00000515418 KDRP35968 1356 aa11.91□□□□□ -0.5
CPNE4-213ENST00000515418 MCM10Q7L590 875 aa11.9□□□□□ -0.5
CPNE4-213ENST00000515418 FANCIQ9NVI1 1328 aa11.9□□□□□ -0.5
CPNE4-213ENST00000515418 EXOSC9Q06265 439 aaKnown RBP11.9□□□□□ -0.5
CPNE4-213ENST00000515418 C20orf194Q5TEA3 1177 aa11.88□□□□□ -0.51
CPNE4-213ENST00000515418 IL16Q14005 1332 aa11.88□□□□□ -0.51
CPNE4-213ENST00000515418 KIAA0232Q92628 1395 aa11.88□□□□□ -0.51
CPNE4-213ENST00000515418 BCL2L13Q9BXK5 485 aa11.88□□□□□ -0.51
CPNE4-213ENST00000515418 PHRF1Q9P1Y6 1649 aaKnown RBP11.87□□□□□ -0.51
CPNE4-213ENST00000515418 HAP1P54257 671 aaPredicted RBP11.87□□□□□ -0.51
CPNE4-213ENST00000515418 EXOC6Q8TAG9 804 aa11.87□□□□□ -0.51
CPNE4-213ENST00000515418 RARSP54136 660 aaKnown RBP11.87□□□□□ -0.51
CPNE4-213ENST00000515418 PIP4K2BP78356 416 aa11.87□□□□□ -0.51
CPNE4-213ENST00000515418 LMOD3Q0VAK6 560 aa11.87□□□□□ -0.51
CPNE4-213ENST00000515418 MBIPQ9NS73 344 aa11.87□□□□□ -0.51
CPNE4-213ENST00000515418 NLRP2Q9NX02 1062 aa11.87□□□□□ -0.51
CPNE4-213ENST00000515418 MIS18AQ9NYP9 233 aa11.87□□□□□ -0.51
CPNE4-213ENST00000515418 ELL2O00472 640 aaPredicted RBP11.86□□□□□ -0.51
CPNE4-213ENST00000515418 ZNF853P0CG23 659 aa11.86□□□□□ -0.51
CPNE4-213ENST00000515418 ERBB3P21860 1342 aa11.86□□□□□ -0.51
CPNE4-213ENST00000515418 ROBO1Q9Y6N7 1651 aa11.86□□□□□ -0.51
CPNE4-213ENST00000515418 CSB-PGBD3P0DP91 1061 aa11.85□□□□□ -0.51
CPNE4-213ENST00000515418 COL18A1P39060 1754 aa11.85□□□□□ -0.51
CPNE4-213ENST00000515418 GNAI1P63096 354 aa11.85□□□□□ -0.51
CPNE4-213ENST00000515418 B4GALNT3Q6L9W6 998 aa11.85□□□□□ -0.51
CPNE4-213ENST00000515418 GAS2L2Q8NHY3 880 aa11.85□□□□□ -0.51
CPNE4-213ENST00000515418 RTF1Q92541 710 aaKnown RBP11.85□□□□□ -0.51
CPNE4-213ENST00000515418 CFAP44Q96MT7 982 aa11.85□□□□□ -0.51
CPNE4-213ENST00000515418 PRDM11Q9NQV5 511 aa11.85□□□□□ -0.51
CPNE4-213ENST00000515418 IFT57Q9NWB7 429 aa11.85□□□□□ -0.51
CPNE4-213ENST00000515418 PPP4R2Q9NY27 417 aa11.85□□□□□ -0.51
CPNE4-213ENST00000515418 CRYBG1Q9Y4K1 1723 aa11.85□□□□□ -0.51
CPNE4-213ENST00000515418 NHSL1Q5SYE7 1610 aa11.85□□□□□ -0.51
CPNE4-213ENST00000515418 CALD1Q05682 793 aaKnown RBP11.85□□□□□ -0.51
CPNE4-213ENST00000515418 ERICH6BQ5W0A0 696 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms