RNA–Protein interactions for RNA: ENST00000514488.1

MATR3-224, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-224ENST00000514488 MAP3K9P80192 1104 aa13.31□□□□□ -0.28
MATR3-224ENST00000514488 ANO8Q9HCE9 1232 aaPredicted RBP13.3□□□□□ -0.28
MATR3-224ENST00000514488 EVI5O60447 810 aa13.29□□□□□ -0.28
MATR3-224ENST00000514488 PPP4R3BQ5MIZ7 849 aa13.29□□□□□ -0.28
MATR3-224ENST00000514488 IQGAP3Q86VI3 1631 aa13.28□□□□□ -0.28
MATR3-224ENST00000514488 FAM50AQ14320 339 aaKnown RBP13.28□□□□□ -0.28
MATR3-224ENST00000514488 USP21Q9UK80 565 aa13.28□□□□□ -0.28
MATR3-224ENST00000514488 METP08581 1390 aa13.28□□□□□ -0.28
MATR3-224ENST00000514488 ADGRL3Q9HAR2 1447 aa13.28□□□□□ -0.28
MATR3-224ENST00000514488 LAMC1P11047 1609 aa13.26□□□□□ -0.29
MATR3-224ENST00000514488 POTEEQ6S8J3 1075 aa13.26□□□□□ -0.29
MATR3-224ENST00000514488 MARF1Q9Y4F3 1742 aaKnown RBP13.25□□□□□ -0.29
MATR3-224ENST00000514488 TRPC5Q9UL62 973 aaPredicted RBP13.25□□□□□ -0.29
MATR3-224ENST00000514488 SPHKAPQ2M3C7 1700 aa13.25□□□□□ -0.29
MATR3-224ENST00000514488 C1orf167Q5SNV9 1468 aa13.24□□□□□ -0.29
MATR3-224ENST00000514488 ATRNO75882 1429 aa13.24□□□□□ -0.29
MATR3-224ENST00000514488 LSM11P83369 360 aaKnown RBP eCLIP13.24□□□□□ -0.29
MATR3-224ENST00000514488 MMRN1Q13201 1228 aa13.24□□□□□ -0.29
MATR3-224ENST00000514488 WDR70Q9NW82 654 aa13.24□□□□□ -0.29
MATR3-224ENST00000514488 ARHGAP33O14559 1287 aa13.23□□□□□ -0.29
MATR3-224ENST00000514488 ORAI2Q96SN7 254 aa13.23□□□□□ -0.29
MATR3-224ENST00000514488 COL22A1Q8NFW1 1626 aaPredicted RBP13.23□□□□□ -0.29
MATR3-224ENST00000514488 FOSBP53539 338 aa13.22□□□□□ -0.29
MATR3-224ENST00000514488 ZNF326Q5BKZ1 582 aaKnown RBP13.22□□□□□ -0.29
MATR3-224ENST00000514488 FNBP4Q8N3X1 1017 aaPredicted RBP13.22□□□□□ -0.29
MATR3-224ENST00000514488 ZNF454Q8N9F8 522 aa13.22□□□□□ -0.29
MATR3-224ENST00000514488 TSHZ2Q9NRE2 1034 aa13.22□□□□□ -0.29
MATR3-224ENST00000514488 BRWD3Q6RI45 1802 aa13.22□□□□□ -0.29
MATR3-224ENST00000514488 PTCH1Q13635 1447 aa13.22□□□□□ -0.29
MATR3-224ENST00000514488 SOS2Q07890 1332 aaPredicted RBP13.21□□□□□ -0.29
MATR3-224ENST00000514488 DPYSL4O14531 572 aa13.21□□□□□ -0.29
MATR3-224ENST00000514488 E2F4Q16254 413 aa13.21□□□□□ -0.29
MATR3-224ENST00000514488 AXIN2Q9Y2T1 843 aa13.21□□□□□ -0.29
MATR3-224ENST00000514488 NUP155O75694 1391 aa13.2□□□□□ -0.3
MATR3-224ENST00000514488 NEXMIFQ5QGS0 1516 aa13.19□□□□□ -0.3
MATR3-224ENST00000514488 BCL9LQ86UU0 1499 aa13.19□□□□□ -0.3
MATR3-224ENST00000514488 MYOM2P54296 1465 aa13.18□□□□□ -0.3
MATR3-224ENST00000514488 PLCB2Q00722 1185 aa13.18□□□□□ -0.3
MATR3-224ENST00000514488 ANKRD13DQ6ZTN6 518 aa13.18□□□□□ -0.3
MATR3-224ENST00000514488 CLTCL1P53675 1640 aa13.17□□□□□ -0.3
MATR3-224ENST00000514488 PTGER2P43116 358 aa13.17□□□□□ -0.3
MATR3-224ENST00000514488 KIF1BO60333 1816 aa13.17□□□□□ -0.3
MATR3-224ENST00000514488 ROBO2Q9HCK4 1378 aa13.17□□□□□ -0.3
MATR3-224ENST00000514488 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.16□□□□□ -0.3
MATR3-224ENST00000514488 GLI3P10071 1580 aa13.16□□□□□ -0.3
MATR3-224ENST00000514488 DEFB132Q7Z7B7 95 aa13.16□□□□□ -0.3
MATR3-224ENST00000514488 CCDC125Q86Z20 511 aa13.16□□□□□ -0.3
MATR3-224ENST00000514488 BCL2L12Q9HB09 334 aa13.16□□□□□ -0.3
MATR3-224ENST00000514488 ARIH1Q9Y4X5 557 aaPredicted RBP13.16□□□□□ -0.3
MATR3-224ENST00000514488 LRP5O75197 1615 aa13.16□□□□□ -0.3
MATR3-224ENST00000514488 XPCQ01831 940 aaPredicted RBP13.15□□□□□ -0.3
MATR3-224ENST00000514488 GJD4Q96KN9 370 aaPredicted RBP13.15□□□□□ -0.3
MATR3-224ENST00000514488 ZDHHC16Q969W1 377 aa13.14□□□□□ -0.31
MATR3-224ENST00000514488 PXDNQ92626 1479 aa13.14□□□□□ -0.31
MATR3-224ENST00000514488 BLMP54132 1417 aaPredicted RBP13.13□□□□□ -0.31
MATR3-224ENST00000514488 RALGAPBQ86X10 1494 aa13.13□□□□□ -0.31
MATR3-224ENST00000514488 PSEN2P49810 448 aa13.13□□□□□ -0.31
MATR3-224ENST00000514488 ROCK1Q13464 1354 aa13.12□□□□□ -0.31
MATR3-224ENST00000514488 PHF14O94880 888 aa13.12□□□□□ -0.31
MATR3-224ENST00000514488 PDIA6Q15084 440 aa13.12□□□□□ -0.31
MATR3-224ENST00000514488 KCNK17Q96T54 332 aa13.12□□□□□ -0.31
MATR3-224ENST00000514488 PCDHGA10Q9Y5H3 936 aa13.12□□□□□ -0.31
MATR3-224ENST00000514488 SPDYE16A6NNV3 312 aaPredicted RBP13.11□□□□□ -0.31
MATR3-224ENST00000514488 TK2O00142 265 aa13.11□□□□□ -0.31
MATR3-224ENST00000514488 ITGAEP38570 1179 aa13.11□□□□□ -0.31
MATR3-224ENST00000514488 ESCO1Q5FWF5 840 aa13.11□□□□□ -0.31
MATR3-224ENST00000514488 DMRTA1Q5VZB9 504 aa13.11□□□□□ -0.31
MATR3-224ENST00000514488 FOXO3O43524 673 aa13.1□□□□□ -0.31
MATR3-224ENST00000514488 ADAM33Q9BZ11 813 aa13.1□□□□□ -0.31
MATR3-224ENST00000514488 CDC42BPGQ6DT37 1551 aa13.1□□□□□ -0.31
MATR3-224ENST00000514488 NPHP3Q7Z494 1330 aa13.1□□□□□ -0.31
MATR3-224ENST00000514488 NUTM2FA1L443 756 aa13.09□□□□□ -0.31
MATR3-224ENST00000514488 PTPREP23469 700 aa13.09□□□□□ -0.31
MATR3-224ENST00000514488 ADGRD1Q6QNK2 874 aa13.09□□□□□ -0.31
MATR3-224ENST00000514488 PPLO60437 1756 aa13.08□□□□□ -0.32
MATR3-224ENST00000514488 TYW1BQ6NUM6 668 aa13.08□□□□□ -0.32
MATR3-224ENST00000514488 UNC5CLQ8IV45 518 aa13.08□□□□□ -0.32
MATR3-224ENST00000514488 FBXW7Q969H0 707 aa13.08□□□□□ -0.32
MATR3-224ENST00000514488 USP32Q8NFA0 1604 aa13.08□□□□□ -0.32
MATR3-224ENST00000514488 PLCH1Q4KWH8 1693 aa13.08□□□□□ -0.32
MATR3-224ENST00000514488 SLIT2O94813 1529 aa13.08□□□□□ -0.32
MATR3-224ENST00000514488 SF3B2Q13435 895 aaKnown RBP13.07□□□□□ -0.32
MATR3-224ENST00000514488 EPAS1Q99814 870 aa13.07□□□□□ -0.32
MATR3-224ENST00000514488 HFM1A2PYH4 1435 aa13.06□□□□□ -0.32
MATR3-224ENST00000514488 PRAG1Q86YV5 1406 aa13.06□□□□□ -0.32
MATR3-224ENST00000514488 SEPT12Q8IYM1 358 aa13.06□□□□□ -0.32
MATR3-224ENST00000514488 RNF166Q96A37 237 aaPredicted RBP13.06□□□□□ -0.32
MATR3-224ENST00000514488 RGPD8O14715 1765 aaPredicted RBP13.06□□□□□ -0.32
MATR3-224ENST00000514488 NAIPQ13075 1403 aa13.05□□□□□ -0.32
MATR3-224ENST00000514488 SLC4A5Q9BY07 1137 aa13.04□□□□□ -0.32
MATR3-224ENST00000514488 ABCA3Q99758 1704 aa13.04□□□□□ -0.32
MATR3-224ENST00000514488 FMN2Q9NZ56 1722 aa13.03□□□□□ -0.32
MATR3-224ENST00000514488 NWD2Q9ULI1 1742 aa13.03□□□□□ -0.32
MATR3-224ENST00000514488 HRCP23327 699 aa13.03□□□□□ -0.32
MATR3-224ENST00000514488 HRO43593 1189 aa13.02□□□□□ -0.33
MATR3-224ENST00000514488 CABLES1Q8TDN4 633 aa13.02□□□□□ -0.33
MATR3-224ENST00000514488 DDX12PQ92771 950 aa13.02□□□□□ -0.33
MATR3-224ENST00000514488 CCDC9Q9Y3X0 531 aaKnown RBP13.02□□□□□ -0.33
MATR3-224ENST00000514488 SPATA31A3Q5VYP0 1347 aa13.02□□□□□ -0.33
MATR3-224ENST00000514488 KIF1AQ12756 1690 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms