RNA–Protein interactions for RNA: ENST00000514316.1

SEMA6A-213, Transcript of semaphorin 6A, humanhuman

TSL 4

Gene SEMA6A, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-213ENST00000514316 CCDC180Q9P1Z9 1646 aa12.59□□□□□ -0.39
SEMA6A-213ENST00000514316 ADH1CP00326 375 aa12.58□□□□□ -0.4
SEMA6A-213ENST00000514316 NR5A1Q13285 461 aa12.57□□□□□ -0.4
SEMA6A-213ENST00000514316 KCTD15Q96SI1 283 aaPredicted RBP12.57□□□□□ -0.4
SEMA6A-213ENST00000514316 CCDC125Q86Z20 511 aa12.56□□□□□ -0.4
SEMA6A-213ENST00000514316 SEPT12Q8IYM1 358 aa12.56□□□□□ -0.4
SEMA6A-213ENST00000514316 ZNF777Q9ULD5 760 aaPredicted RBP12.56□□□□□ -0.4
SEMA6A-213ENST00000514316 WASF2Q9Y6W5 498 aa12.56□□□□□ -0.4
SEMA6A-213ENST00000514316 LAPTM4AQ15012 233 aa12.55□□□□□ -0.4
SEMA6A-213ENST00000514316 HDGFL1Q5TGJ6 251 aa12.55□□□□□ -0.4
SEMA6A-213ENST00000514316 RNF20Q5VTR2 975 aa12.55□□□□□ -0.4
SEMA6A-213ENST00000514316 GLMNQ92990 594 aa12.55□□□□□ -0.4
SEMA6A-213ENST00000514316 CEP126Q9P2H0 1117 aa12.55□□□□□ -0.4
SEMA6A-213ENST00000514316 ESPNB1AK53 854 aa12.54□□□□□ -0.4
SEMA6A-213ENST00000514316 GRM5P41594 1212 aa12.54□□□□□ -0.4
SEMA6A-213ENST00000514316 NRG2O14511 850 aaPredicted RBP12.53□□□□□ -0.4
SEMA6A-213ENST00000514316 FSHRP23945 695 aa12.53□□□□□ -0.4
SEMA6A-213ENST00000514316 CALR3Q96L12 384 aaKnown RBP12.53□□□□□ -0.4
SEMA6A-213ENST00000514316 GFRA3O60609 400 aa12.52□□□□□ -0.41
SEMA6A-213ENST00000514316 ADAMTS19Q8TE59 1207 aa12.52□□□□□ -0.41
SEMA6A-213ENST00000514316 J3QL48 77 aa12.51□□□□□ -0.41
SEMA6A-213ENST00000514316 GIGYF1O75420 1035 aaPredicted RBP12.51□□□□□ -0.41
SEMA6A-213ENST00000514316 SMPD1P17405 629 aa12.51□□□□□ -0.41
SEMA6A-213ENST00000514316 DHX9Q08211 1270 aaKnown RBP12.51□□□□□ -0.41
SEMA6A-213ENST00000514316 SLFNL1Q499Z3 407 aa12.51□□□□□ -0.41
SEMA6A-213ENST00000514316 TRIM52Q96A61 297 aa12.51□□□□□ -0.41
SEMA6A-213ENST00000514316 INTS6LQ5JSJ4 861 aaKnown RBP12.5□□□□□ -0.41
SEMA6A-213ENST00000514316 NNTQ13423 1086 aa12.49□□□□□ -0.41
SEMA6A-213ENST00000514316 CCDC116Q8IYX3 515 aa12.49□□□□□ -0.41
SEMA6A-213ENST00000514316 IRX2Q9BZI1 471 aaPredicted RBP12.49□□□□□ -0.41
SEMA6A-213ENST00000514316 RNF135Q8IUD6 432 aa12.47□□□□□ -0.41
SEMA6A-213ENST00000514316 PHTF2Q8N3S3 785 aa12.47□□□□□ -0.41
SEMA6A-213ENST00000514316 NFATC2IPQ8NCF5 419 aa12.47□□□□□ -0.41
SEMA6A-213ENST00000514316 FAM187AA6NFU0 413 aa12.46□□□□□ -0.41
SEMA6A-213ENST00000514316 DGAT1O75907 488 aa12.46□□□□□ -0.41
SEMA6A-213ENST00000514316 NR3C2P08235 984 aa12.46□□□□□ -0.41
SEMA6A-213ENST00000514316 EMILIN1Q9Y6C2 1016 aa12.46□□□□□ -0.41
SEMA6A-213ENST00000514316 PGPEP1Q9NXJ5 209 aa12.45□□□□□ -0.42
SEMA6A-213ENST00000514316 RAB15P59190 212 aa12.44□□□□□ -0.42
SEMA6A-213ENST00000514316 PKDCCQ504Y2 493 aa12.44□□□□□ -0.42
SEMA6A-213ENST00000514316 CHIC2Q9UKJ5 165 aa12.44□□□□□ -0.42
SEMA6A-213ENST00000514316 ARID3CA6NKF2 412 aa12.43□□□□□ -0.42
SEMA6A-213ENST00000514316 ERVH48-1M5A8F1 160 aa12.43□□□□□ -0.42
SEMA6A-213ENST00000514316 MAP7D1Q3KQU3 841 aa12.43□□□□□ -0.42
SEMA6A-213ENST00000514316 AVPP01185 164 aa12.42□□□□□ -0.42
SEMA6A-213ENST00000514316 PPP1R26Q5T8A7 1209 aaPredicted RBP12.42□□□□□ -0.42
SEMA6A-213ENST00000514316 HPS1Q92902 700 aa12.42□□□□□ -0.42
SEMA6A-213ENST00000514316 UCN2Q96RP3 112 aa12.42□□□□□ -0.42
SEMA6A-213ENST00000514316 CCDC97Q96F63 343 aaPredicted RBP12.41□□□□□ -0.42
SEMA6A-213ENST00000514316 SERPINA10Q9UK55 444 aa12.41□□□□□ -0.42
SEMA6A-213ENST00000514316 DOLKQ9UPQ8 538 aa12.41□□□□□ -0.42
SEMA6A-213ENST00000514316 PCDHB11Q9Y5F2 797 aa12.41□□□□□ -0.42
SEMA6A-213ENST00000514316 LZTS3O60299 673 aaPredicted RBP12.4□□□□□ -0.42
SEMA6A-213ENST00000514316 SKIP12755 728 aa12.4□□□□□ -0.42
SEMA6A-213ENST00000514316 PLPP7Q8NBV4 271 aa12.4□□□□□ -0.42
SEMA6A-213ENST00000514316 CCDC85AQ96PX6 553 aaPredicted RBP12.4□□□□□ -0.42
SEMA6A-213ENST00000514316 SUPT5HO00267 1087 aaKnown RBP12.39□□□□□ -0.43
SEMA6A-213ENST00000514316 PIK3CDO00329 1044 aa12.39□□□□□ -0.43
SEMA6A-213ENST00000514316 ATP9BO43861 1147 aa12.39□□□□□ -0.43
SEMA6A-213ENST00000514316 WDR4P57081 412 aaKnown RBP12.39□□□□□ -0.43
SEMA6A-213ENST00000514316 CTC1Q2NKJ3 1217 aa12.39□□□□□ -0.43
SEMA6A-213ENST00000514316 KLF16Q9BXK1 252 aaPredicted RBP12.39□□□□□ -0.43
SEMA6A-213ENST00000514316 PPP1R12CQ9BZL4 782 aa12.39□□□□□ -0.43
SEMA6A-213ENST00000514316 MYT1Q01538 1121 aa12.38□□□□□ -0.43
SEMA6A-213ENST00000514316 ZIC2O95409 532 aaPredicted RBP12.37□□□□□ -0.43
SEMA6A-213ENST00000514316 TIMP2P16035 220 aa12.37□□□□□ -0.43
SEMA6A-213ENST00000514316 TRAF7Q6Q0C0 670 aa12.37□□□□□ -0.43
SEMA6A-213ENST00000514316 TBC1D9Q6ZT07 1266 aa12.37□□□□□ -0.43
SEMA6A-213ENST00000514316 SIRT1Q96EB6 747 aa12.37□□□□□ -0.43
SEMA6A-213ENST00000514316 C1orf115Q9H7X2 142 aa12.37□□□□□ -0.43
SEMA6A-213ENST00000514316 TMPRSS4Q9NRS4 437 aa12.37□□□□□ -0.43
SEMA6A-213ENST00000514316 PALM3A6NDB9 673 aaPredicted RBP12.36□□□□□ -0.43
SEMA6A-213ENST00000514316 PLEKHM2Q8IWE5 1019 aa12.36□□□□□ -0.43
SEMA6A-213ENST00000514316 ZNF784Q8NCA9 323 aaPredicted RBP12.36□□□□□ -0.43
SEMA6A-213ENST00000514316 ITPKCQ96DU7 683 aa12.36□□□□□ -0.43
SEMA6A-213ENST00000514316 USP17L5A8MUK1 530 aa12.35□□□□□ -0.43
SEMA6A-213ENST00000514316 MYCP01106 439 aaPredicted RBP12.35□□□□□ -0.43
SEMA6A-213ENST00000514316 SMCPP49901 116 aaPredicted RBP12.35□□□□□ -0.43
SEMA6A-213ENST00000514316 ERVK-9P63128 1117 aa12.35□□□□□ -0.43
SEMA6A-213ENST00000514316 USP4Q13107 963 aa12.35□□□□□ -0.43
SEMA6A-213ENST00000514316 CC2D2BQ6DHV5 1058 aa12.35□□□□□ -0.43
SEMA6A-213ENST00000514316 CRIPAKQ8N1N5 446 aa12.35□□□□□ -0.43
SEMA6A-213ENST00000514316 ESF1Q9H501 851 aaKnown RBP12.35□□□□□ -0.43
SEMA6A-213ENST00000514316 TFIP11Q9UBB9 837 aaKnown RBP12.35□□□□□ -0.43
SEMA6A-213ENST00000514316 CAPN5O15484 640 aaPredicted RBP12.34□□□□□ -0.43
SEMA6A-213ENST00000514316 EML3Q32P44 896 aa12.34□□□□□ -0.43
SEMA6A-213ENST00000514316 CCDC82Q8N4S0 544 aa12.34□□□□□ -0.43
SEMA6A-213ENST00000514316 TSGA10IPQ3SY00 556 aa12.33□□□□□ -0.44
SEMA6A-213ENST00000514316 OXLD1Q5BKU9 147 aa12.33□□□□□ -0.44
SEMA6A-213ENST00000514316 CDCA7Q9BWT1 371 aaPredicted RBP12.33□□□□□ -0.44
SEMA6A-213ENST00000514316 ZFAND3Q9H8U3 227 aa12.33□□□□□ -0.44
SEMA6A-213ENST00000514316 CYLDQ9NQC7 956 aa12.33□□□□□ -0.44
SEMA6A-213ENST00000514316 MAFBQ9Y5Q3 323 aaPredicted RBP12.33□□□□□ -0.44
SEMA6A-213ENST00000514316 USP17L3A6NCW0 530 aa12.32□□□□□ -0.44
SEMA6A-213ENST00000514316 USP17L4A6NCW7 530 aa12.32□□□□□ -0.44
SEMA6A-213ENST00000514316 LILRA1O75019 489 aa12.32□□□□□ -0.44
SEMA6A-213ENST00000514316 USP17L2Q6R6M4 530 aa12.32□□□□□ -0.44
SEMA6A-213ENST00000514316 USP17L1Q7RTZ2 530 aa12.32□□□□□ -0.44
SEMA6A-213ENST00000514316 NCOA4Q13772 614 aa12.31□□□□□ -0.44
SEMA6A-213ENST00000514316 Q6ZVU0 165 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms