RNA–Protein interactions for RNA: ENST00000513044.1

RBM47-210, Transcript of RNA binding motif protein 47, human

TSL 2

Gene RBM47, Length 2,118 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM47-210	ENST00000513044	CFAP53	Q96M91	514 aa		10.91	□□□□□ -0.66
RBM47-210	ENST00000513044	ORAI2	Q96SN7	254 aa		10.91	□□□□□ -0.66
RBM47-210	ENST00000513044	ZBTB12	Q9Y330	459 aa	Predicted RBP	10.91	□□□□□ -0.66
RBM47-210	ENST00000513044	TNNT2	P45379	298 aa	Predicted RBP	10.9	□□□□□ -0.66
RBM47-210	ENST00000513044	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.9	□□□□□ -0.66
RBM47-210	ENST00000513044	LTBP4	Q8N2S1	1624 aa		10.89	□□□□□ -0.67
RBM47-210	ENST00000513044	GTPBP6	O43824	516 aa	Predicted RBP	10.89	□□□□□ -0.67
RBM47-210	ENST00000513044	WDR43	Q15061	677 aa	Known RBP eCLIP	10.89	□□□□□ -0.67
RBM47-210	ENST00000513044	TRPM3	Q9HCF6	1732 aa	Predicted RBP	10.89	□□□□□ -0.67
RBM47-210	ENST00000513044	MARF1	Q9Y4F3	1742 aa	Known RBP	10.89	□□□□□ -0.67
RBM47-210	ENST00000513044	PSME1	Q06323	249 aa		10.88	□□□□□ -0.67
RBM47-210	ENST00000513044	KIF24	Q5T7B8	1368 aa		10.88	□□□□□ -0.67
RBM47-210	ENST00000513044	SBNO1	A3KN83	1393 aa		10.87	□□□□□ -0.67
RBM47-210	ENST00000513044	FOXO3	O43524	673 aa		10.87	□□□□□ -0.67
RBM47-210	ENST00000513044	NGEF	Q8N5V2	710 aa		10.86	□□□□□ -0.67
RBM47-210	ENST00000513044	SSUH2	Q9Y2M2	353 aa		10.86	□□□□□ -0.67
RBM47-210	ENST00000513044	NPHP3	Q7Z494	1330 aa		10.85	□□□□□ -0.67
RBM47-210	ENST00000513044	KRT28	Q7Z3Y7	464 aa		10.85	□□□□□ -0.67
RBM47-210	ENST00000513044	ABTB2	Q8N961	1025 aa		10.85	□□□□□ -0.67
RBM47-210	ENST00000513044	SLAIN2	Q9P270	581 aa		10.85	□□□□□ -0.67
RBM47-210	ENST00000513044	EMILIN1	Q9Y6C2	1016 aa		10.85	□□□□□ -0.67
RBM47-210	ENST00000513044	SLIT3	O75094	1523 aa		10.85	□□□□□ -0.67
RBM47-210	ENST00000513044	PXDN	Q92626	1479 aa		10.85	□□□□□ -0.67
RBM47-210	ENST00000513044	USP19	O94966	1318 aa		10.85	□□□□□ -0.67
RBM47-210	ENST00000513044	MAP2	P11137	1827 aa	Known RBP	10.85	□□□□□ -0.67
RBM47-210	ENST00000513044	DIAPH1	O60610	1272 aa	Known RBP	10.85	□□□□□ -0.67
RBM47-210	ENST00000513044	FBLN1	P23142	703 aa		10.85	□□□□□ -0.67
RBM47-210	ENST00000513044	NLRP6	P59044	892 aa		10.85	□□□□□ -0.67
RBM47-210	ENST00000513044	BRINP3	Q76B58	766 aa		10.85	□□□□□ -0.67
RBM47-210	ENST00000513044	NUDC	Q9Y266	331 aa		10.85	□□□□□ -0.67
RBM47-210	ENST00000513044	ALS2	Q96Q42	1657 aa		10.84	□□□□□ -0.67
RBM47-210	ENST00000513044	IL13	P35225	146 aa		10.84	□□□□□ -0.67
RBM47-210	ENST00000513044	NFAT5	O94916	1531 aa		10.84	□□□□□ -0.67
RBM47-210	ENST00000513044	PHRF1	Q9P1Y6	1649 aa	Known RBP	10.83	□□□□□ -0.68
RBM47-210	ENST00000513044	MAP3K19	Q56UN5	1328 aa		10.83	□□□□□ -0.68
RBM47-210	ENST00000513044	ZNF521	Q96K83	1311 aa		10.83	□□□□□ -0.68
RBM47-210	ENST00000513044	CAPN15	O75808	1086 aa		10.83	□□□□□ -0.68
RBM47-210	ENST00000513044	RRS1	Q15050	365 aa	Known RBP	10.83	□□□□□ -0.68
RBM47-210	ENST00000513044	KCNH5	Q8NCM2	988 aa		10.83	□□□□□ -0.68
RBM47-210	ENST00000513044	PEAK1	Q9H792	1746 aa		10.83	□□□□□ -0.68
RBM47-210	ENST00000513044	SOS2	Q07890	1332 aa	Predicted RBP	10.83	□□□□□ -0.68
RBM47-210	ENST00000513044	IQSEC2	Q5JU85	1478 aa		10.82	□□□□□ -0.68
RBM47-210	ENST00000513044	PAK3	O75914	559 aa	Predicted RBP	10.82	□□□□□ -0.68
RBM47-210	ENST00000513044	PDE3B	Q13370	1112 aa		10.82	□□□□□ -0.68
RBM47-210	ENST00000513044	RUNDC1	Q96C34	613 aa		10.82	□□□□□ -0.68
RBM47-210	ENST00000513044	RTL1	A6NKG5	1358 aa		10.82	□□□□□ -0.68
RBM47-210	ENST00000513044	FLT4	P35916	1363 aa		10.82	□□□□□ -0.68
RBM47-210	ENST00000513044	PLEKHF1	Q96S99	279 aa		10.82	□□□□□ -0.68
RBM47-210	ENST00000513044	FCHSD2	O94868	740 aa		10.81	□□□□□ -0.68
RBM47-210	ENST00000513044	TNS3	Q68CZ2	1445 aa		10.81	□□□□□ -0.68
RBM47-210	ENST00000513044	SPATA31A3	Q5VYP0	1347 aa		10.81	□□□□□ -0.68
RBM47-210	ENST00000513044	MED1	Q15648	1581 aa	Predicted RBP	10.8	□□□□□ -0.68
RBM47-210	ENST00000513044	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.8	□□□□□ -0.68
RBM47-210	ENST00000513044	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
RBM47-210	ENST00000513044	PNN	Q9H307	717 aa	Known RBP	10.8	□□□□□ -0.68
RBM47-210	ENST00000513044	RGPD1	P0DJD0	1748 aa		10.8	□□□□□ -0.68
RBM47-210	ENST00000513044	NHSL1	Q5SYE7	1610 aa		10.79	□□□□□ -0.68
RBM47-210	ENST00000513044	CCDC27	Q2M243	656 aa		10.79	□□□□□ -0.68
RBM47-210	ENST00000513044	ARHGEF10	O15013	1369 aa		10.79	□□□□□ -0.68
RBM47-210	ENST00000513044	APAF1	O14727	1248 aa		10.79	□□□□□ -0.68
RBM47-210	ENST00000513044	PPM1G	O15355	546 aa	Predicted RBP	10.79	□□□□□ -0.68
RBM47-210	ENST00000513044	GC	P02774	474 aa		10.79	□□□□□ -0.68
RBM47-210	ENST00000513044	XPC	Q01831	940 aa	Predicted RBP	10.79	□□□□□ -0.68
RBM47-210	ENST00000513044	EIF4A2	Q14240	407 aa	Known RBP	10.79	□□□□□ -0.68
RBM47-210	ENST00000513044	HSP90AB2P	Q58FF8	381 aa		10.79	□□□□□ -0.68
RBM47-210	ENST00000513044	RSPH6A	Q9H0K4	717 aa		10.79	□□□□□ -0.68
RBM47-210	ENST00000513044	ABCB7	O75027	752 aa		10.78	□□□□□ -0.68
RBM47-210	ENST00000513044	HOXC9	P31274	260 aa		10.78	□□□□□ -0.68
RBM47-210	ENST00000513044	NUTM2G	Q5VZR2	741 aa		10.78	□□□□□ -0.68
RBM47-210	ENST00000513044	ARHGEF25	Q86VW2	580 aa		10.78	□□□□□ -0.68
RBM47-210	ENST00000513044	CCDC146	Q8IYE0	955 aa		10.78	□□□□□ -0.68
RBM47-210	ENST00000513044	IP6K1	Q92551	441 aa		10.78	□□□□□ -0.68
RBM47-210	ENST00000513044	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.78	□□□□□ -0.68
RBM47-210	ENST00000513044	CRYBG1	Q9Y4K1	1723 aa		10.77	□□□□□ -0.69
RBM47-210	ENST00000513044	KDR	P35968	1356 aa		10.77	□□□□□ -0.69
RBM47-210	ENST00000513044	ABCC6	O95255	1503 aa		10.77	□□□□□ -0.69
RBM47-210	ENST00000513044	U2SURP	O15042	1029 aa	Known RBP	10.77	□□□□□ -0.69
RBM47-210	ENST00000513044	TCP11L2	Q8N4U5	519 aa		10.77	□□□□□ -0.69
RBM47-210	ENST00000513044	DDX17	Q92841	729 aa	Known RBP	10.77	□□□□□ -0.69
RBM47-210	ENST00000513044	AMPH	P49418	695 aa		10.76	□□□□□ -0.69
RBM47-210	ENST00000513044	IGSF1	Q8N6C5	1336 aa		10.76	□□□□□ -0.69
RBM47-210	ENST00000513044	AHDC1	Q5TGY3	1603 aa	Predicted RBP	10.76	□□□□□ -0.69
RBM47-210	ENST00000513044	SPDYE2B	A6NHP3	402 aa		10.76	□□□□□ -0.69
RBM47-210	ENST00000513044	SPDYE6	P0CI01	402 aa		10.76	□□□□□ -0.69
RBM47-210	ENST00000513044	SPDYE2	Q495Y8	402 aa		10.76	□□□□□ -0.69
RBM47-210	ENST00000513044	TRMT2A	Q8IZ69	625 aa	Known RBP	10.76	□□□□□ -0.69
RBM47-210	ENST00000513044	CPD	O75976	1380 aa		10.75	□□□□□ -0.69
RBM47-210	ENST00000513044	PDIA4	P13667	645 aa	Known RBP	10.75	□□□□□ -0.69
RBM47-210	ENST00000513044	WWC1	Q8IX03	1113 aa		10.75	□□□□□ -0.69
RBM47-210	ENST00000513044	LTN1	O94822	1766 aa		10.74	□□□□□ -0.69
RBM47-210	ENST00000513044	NCAPD2	Q15021	1401 aa		10.74	□□□□□ -0.69
RBM47-210	ENST00000513044	SOX12	O15370	315 aa		10.74	□□□□□ -0.69
RBM47-210	ENST00000513044	TMPO	P42166	694 aa	Known RBP	10.74	□□□□□ -0.69
RBM47-210	ENST00000513044	WDR63	Q8IWG1	891 aa		10.74	□□□□□ -0.69
RBM47-210	ENST00000513044	PRKAR2B	P31323	418 aa		10.73	□□□□□ -0.69
RBM47-210	ENST00000513044	GOLGA2	Q08379	1002 aa		10.73	□□□□□ -0.69
RBM47-210	ENST00000513044	ROBO1	Q9Y6N7	1651 aa		10.73	□□□□□ -0.69
RBM47-210	ENST00000513044	SLFN5	Q08AF3	891 aa		10.73	□□□□□ -0.69
RBM47-210	ENST00000513044	MAPK8IP3	Q9UPT6	1336 aa		10.73	□□□□□ -0.69
RBM47-210	ENST00000513044	BRPF1	P55201	1214 aa	Predicted RBP	10.72	□□□□□ -0.69

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