RNA–Protein interactions for RNA: ENST00000512557.5

SLC41A3-216, Transcript of solute carrier family 41 member 3, humanhuman

TSL 2

Gene SLC41A3, Length 3,828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-216ENST00000512557 USHBP1Q8N6Y0 703 aa11.29□□□□□ -0.6
SLC41A3-216ENST00000512557 CABLES1Q8TDN4 633 aa11.29□□□□□ -0.6
SLC41A3-216ENST00000512557 PTPRUQ92729 1446 aa11.28□□□□□ -0.6
SLC41A3-216ENST00000512557 PIP4K2BP78356 416 aa11.28□□□□□ -0.6
SLC41A3-216ENST00000512557 TRIM27P14373 513 aa11.28□□□□□ -0.6
SLC41A3-216ENST00000512557 C1orf115Q9H7X2 142 aa11.27□□□□□ -0.6
SLC41A3-216ENST00000512557 PDZRN3Q9UPQ7 1066 aa11.27□□□□□ -0.6
SLC41A3-216ENST00000512557 ZNF335Q9H4Z2 1342 aaPredicted RBP11.27□□□□□ -0.61
SLC41A3-216ENST00000512557 MVPQ14764 893 aaKnown RBP11.27□□□□□ -0.61
SLC41A3-216ENST00000512557 NFE2L2Q16236 605 aa11.27□□□□□ -0.61
SLC41A3-216ENST00000512557 CCDC27Q2M243 656 aa11.27□□□□□ -0.61
SLC41A3-216ENST00000512557 C8orf34Q49A92 452 aa11.27□□□□□ -0.61
SLC41A3-216ENST00000512557 PLEKHF1Q96S99 279 aa11.27□□□□□ -0.61
SLC41A3-216ENST00000512557 APBB1O00213 710 aa11.27□□□□□ -0.61
SLC41A3-216ENST00000512557 ATF7IPQ6VMQ6 1270 aa11.27□□□□□ -0.61
SLC41A3-216ENST00000512557 TMEM57Q8N5G2 664 aa11.27□□□□□ -0.61
SLC41A3-216ENST00000512557 ARXQ96QS3 562 aa11.27□□□□□ -0.61
SLC41A3-216ENST00000512557 KRT28Q7Z3Y7 464 aa11.26□□□□□ -0.61
SLC41A3-216ENST00000512557 RTN4Q9NQC3 1192 aaKnown RBP11.26□□□□□ -0.61
SLC41A3-216ENST00000512557 MIS18AQ9NYP9 233 aa11.26□□□□□ -0.61
SLC41A3-216ENST00000512557 NEURL4Q96JN8 1562 aa11.26□□□□□ -0.61
SLC41A3-216ENST00000512557 C19orf44Q9H6X5 657 aa11.26□□□□□ -0.61
SLC41A3-216ENST00000512557 USP35Q9P2H5 1018 aa11.26□□□□□ -0.61
SLC41A3-216ENST00000512557 C3P01024 1663 aa11.26□□□□□ -0.61
SLC41A3-216ENST00000512557 MCM10Q7L590 875 aa11.26□□□□□ -0.61
SLC41A3-216ENST00000512557 TSPYL6Q8N831 410 aa11.26□□□□□ -0.61
SLC41A3-216ENST00000512557 RSPH6AQ9H0K4 717 aa11.26□□□□□ -0.61
SLC41A3-216ENST00000512557 NFKBIBQ15653 356 aa11.25□□□□□ -0.61
SLC41A3-216ENST00000512557 CALD1Q05682 793 aaKnown RBP11.25□□□□□ -0.61
SLC41A3-216ENST00000512557 RTF1Q92541 710 aaKnown RBP11.25□□□□□ -0.61
SLC41A3-216ENST00000512557 NECTIN2Q92692 538 aa11.25□□□□□ -0.61
SLC41A3-216ENST00000512557 MFAP1P55081 439 aaKnown RBP11.25□□□□□ -0.61
SLC41A3-216ENST00000512557 GNAI1P63096 354 aa11.25□□□□□ -0.61
SLC41A3-216ENST00000512557 DDX19BQ9UMR2 479 aa11.25□□□□□ -0.61
SLC41A3-216ENST00000512557 TMEM94Q12767 1356 aa11.24□□□□□ -0.61
SLC41A3-216ENST00000512557 CEP170BQ9Y4F5 1589 aaPredicted RBP11.24□□□□□ -0.61
SLC41A3-216ENST00000512557 CHRNA2Q15822 529 aa11.24□□□□□ -0.61
SLC41A3-216ENST00000512557 TWISTNBQ3B726 338 aaPredicted RBP11.24□□□□□ -0.61
SLC41A3-216ENST00000512557 IFT172Q9UG01 1749 aa11.24□□□□□ -0.61
SLC41A3-216ENST00000512557 LNPKQ9C0E8 428 aa11.24□□□□□ -0.61
SLC41A3-216ENST00000512557 KRT24Q2M2I5 525 aa11.23□□□□□ -0.61
SLC41A3-216ENST00000512557 IL13P35225 146 aa11.23□□□□□ -0.61
SLC41A3-216ENST00000512557 NLRP2Q9NX02 1062 aa11.23□□□□□ -0.61
SLC41A3-216ENST00000512557 LMOD3Q0VAK6 560 aa11.23□□□□□ -0.61
SLC41A3-216ENST00000512557 SIRT1Q96EB6 747 aa11.23□□□□□ -0.61
SLC41A3-216ENST00000512557 SLC4A10Q6U841 1118 aa11.22□□□□□ -0.61
SLC41A3-216ENST00000512557 CADPS2Q86UW7 1296 aa11.22□□□□□ -0.61
SLC41A3-216ENST00000512557 PHF23Q9BUL5 403 aaPredicted RBP11.22□□□□□ -0.61
SLC41A3-216ENST00000512557 MBIPQ9NS73 344 aa11.22□□□□□ -0.61
SLC41A3-216ENST00000512557 EIF4A2Q14240 407 aaKnown RBP11.22□□□□□ -0.61
SLC41A3-216ENST00000512557 KIF16BQ96L93 1317 aa11.22□□□□□ -0.61
SLC41A3-216ENST00000512557 PLEKHG3A1L390 1219 aa11.22□□□□□ -0.61
SLC41A3-216ENST00000512557 FAM135BQ49AJ0 1406 aa11.21□□□□□ -0.61
SLC41A3-216ENST00000512557 MAP3K19Q56UN5 1328 aa11.21□□□□□ -0.61
SLC41A3-216ENST00000512557 HSP90AA1P07900 732 aaKnown RBP11.21□□□□□ -0.61
SLC41A3-216ENST00000512557 ANKRD45Q5TZF3 282 aa11.21□□□□□ -0.61
SLC41A3-216ENST00000512557 ARHGEF28Q8N1W1 1705 aaKnown RBP11.21□□□□□ -0.61
SLC41A3-216ENST00000512557 SEC24BO95487 1268 aa11.21□□□□□ -0.61
SLC41A3-216ENST00000512557 C8orf58Q8NAV2 365 aa11.21□□□□□ -0.61
SLC41A3-216ENST00000512557 STRN4Q9NRL3 753 aa11.21□□□□□ -0.61
SLC41A3-216ENST00000512557 MSH6P52701 1360 aa11.21□□□□□ -0.62
SLC41A3-216ENST00000512557 SETD1BQ9UPS6 1966 aaKnown RBP11.21□□□□□ -0.62
SLC41A3-216ENST00000512557 FRAT2O75474 233 aaPredicted RBP11.2□□□□□ -0.62
SLC41A3-216ENST00000512557 UBR1Q8IWV7 1749 aa11.2□□□□□ -0.62
SLC41A3-216ENST00000512557 EDC4Q6P2E9 1401 aaKnown RBP11.2□□□□□ -0.62
SLC41A3-216ENST00000512557 NUTM2BA6NNL0 878 aaPredicted RBP11.19□□□□□ -0.62
SLC41A3-216ENST00000512557 NUTM2EB1AL46 878 aaPredicted RBP11.19□□□□□ -0.62
SLC41A3-216ENST00000512557 AAMPQ13685 434 aa11.19□□□□□ -0.62
SLC41A3-216ENST00000512557 NUTM2AQ8IVF1 878 aaPredicted RBP11.19□□□□□ -0.62
SLC41A3-216ENST00000512557 LRRC59Q96AG4 307 aaKnown RBP11.19□□□□□ -0.62
SLC41A3-216ENST00000512557 MYO3AQ8NEV4 1616 aa11.19□□□□□ -0.62
SLC41A3-216ENST00000512557 CT47B1P0C2W7 299 aaPredicted RBP11.19□□□□□ -0.62
SLC41A3-216ENST00000512557 CCDC9Q9Y3X0 531 aaKnown RBP11.19□□□□□ -0.62
SLC41A3-216ENST00000512557 CD163L1Q9NR16 1453 aa11.19□□□□□ -0.62
SLC41A3-216ENST00000512557 VAMP4O75379 141 aa11.18□□□□□ -0.62
SLC41A3-216ENST00000512557 GSE1Q14687 1217 aa11.18□□□□□ -0.62
SLC41A3-216ENST00000512557 TSPYL4Q9UJ04 414 aa11.18□□□□□ -0.62
SLC41A3-216ENST00000512557 EVA1CP58658 441 aa11.18□□□□□ -0.62
SLC41A3-216ENST00000512557 PRDM11Q9NQV5 511 aa11.18□□□□□ -0.62
SLC41A3-216ENST00000512557 IL16Q14005 1332 aa11.17□□□□□ -0.62
SLC41A3-216ENST00000512557 GCP02774 474 aa11.17□□□□□ -0.62
SLC41A3-216ENST00000512557 CFAP44Q96MT7 982 aa11.17□□□□□ -0.62
SLC41A3-216ENST00000512557 IFT57Q9NWB7 429 aa11.17□□□□□ -0.62
SLC41A3-216ENST00000512557 TTC21AQ8NDW8 1320 aa11.16□□□□□ -0.62
SLC41A3-216ENST00000512557 SLAIN2Q9P270 581 aa11.16□□□□□ -0.62
SLC41A3-216ENST00000512557 USP6P35125 1406 aa11.15□□□□□ -0.62
SLC41A3-216ENST00000512557 ADAMTS2O95450 1211 aa11.15□□□□□ -0.62
SLC41A3-216ENST00000512557 SLC4A2P04920 1241 aa11.15□□□□□ -0.62
SLC41A3-216ENST00000512557 ARHGAP23Q9P227 1491 aa11.15□□□□□ -0.62
SLC41A3-216ENST00000512557 CHMP4BQ9H444 224 aaKnown RBP11.15□□□□□ -0.62
SLC41A3-216ENST00000512557 EYA1Q99502 592 aa11.15□□□□□ -0.63
SLC41A3-216ENST00000512557 C22orf23Q9BZE7 217 aa11.15□□□□□ -0.63
SLC41A3-216ENST00000512557 ATP7BP35670 1465 aa11.15□□□□□ -0.63
SLC41A3-216ENST00000512557 ALDH1L2Q3SY69 923 aa11.14□□□□□ -0.63
SLC41A3-216ENST00000512557 HSCBQ8IWL3 235 aa11.14□□□□□ -0.63
SLC41A3-216ENST00000512557 API5Q9BZZ5 524 aaKnown RBP11.14□□□□□ -0.63
SLC41A3-216ENST00000512557 EIF2S2P20042 333 aaKnown RBP11.14□□□□□ -0.63
SLC41A3-216ENST00000512557 MTHFSDQ2M296 383 aaKnown RBP11.14□□□□□ -0.63
SLC41A3-216ENST00000512557 MRPL50Q8N5N7 158 aaKnown RBP11.14□□□□□ -0.63
SLC41A3-216ENST00000512557 PNPLA6Q8IY17 1366 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms