RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 TTC21AQ8NDW8 1320 aa15.99■□□□□ 0.15
PCDHA4-202ENST00000512229 KRT28Q7Z3Y7 464 aa15.99■□□□□ 0.15
PCDHA4-202ENST00000512229 NEUROD6Q96NK8 337 aa15.99■□□□□ 0.15
PCDHA4-202ENST00000512229 IL16Q14005 1332 aa15.99■□□□□ 0.15
PCDHA4-202ENST00000512229 DDX11L8A8MPP1 907 aa15.98■□□□□ 0.15
PCDHA4-202ENST00000512229 RBM42Q9BTD8 480 aaKnown RBP15.98■□□□□ 0.15
PCDHA4-202ENST00000512229 CFAP65Q6ZU64 1925 aaKnown RBP15.98■□□□□ 0.15
PCDHA4-202ENST00000512229 PIK3C2GO75747 1445 aa15.98■□□□□ 0.15
PCDHA4-202ENST00000512229 TRIM27P14373 513 aa15.98■□□□□ 0.15
PCDHA4-202ENST00000512229 RTN4Q9NQC3 1192 aaKnown RBP15.98■□□□□ 0.15
PCDHA4-202ENST00000512229 ZRANB1Q9UGI0 708 aa15.98■□□□□ 0.15
PCDHA4-202ENST00000512229 A0A1W2PP64 1363 aa15.97■□□□□ 0.15
PCDHA4-202ENST00000512229 NPC1L1Q9UHC9 1359 aa15.97■□□□□ 0.15
PCDHA4-202ENST00000512229 CCDC27Q2M243 656 aa15.97■□□□□ 0.15
PCDHA4-202ENST00000512229 RNF20Q5VTR2 975 aa15.97■□□□□ 0.15
PCDHA4-202ENST00000512229 ISY1Q9ULR0 285 aaKnown RBP15.97■□□□□ 0.15
PCDHA4-202ENST00000512229 FAM83GA6ND36 823 aa15.97■□□□□ 0.15
PCDHA4-202ENST00000512229 CADPS2Q86UW7 1296 aa15.97■□□□□ 0.15
PCDHA4-202ENST00000512229 CHD1O14646 1710 aa15.97■□□□□ 0.15
PCDHA4-202ENST00000512229 GOLGA6L3A6NEY3 463 aa15.97■□□□□ 0.15
PCDHA4-202ENST00000512229 MYL6BP14649 208 aa15.96■□□□□ 0.15
PCDHA4-202ENST00000512229 LRRCC1Q9C099 1032 aa15.96■□□□□ 0.15
PCDHA4-202ENST00000512229 CSPP1Q1MSJ5 1256 aa15.96■□□□□ 0.14
PCDHA4-202ENST00000512229 TTC37Q6PGP7 1564 aa15.96■□□□□ 0.14
PCDHA4-202ENST00000512229 MEX3CQ5U5Q3 659 aaKnown RBP15.95■□□□□ 0.14
PCDHA4-202ENST00000512229 CNTROBQ8N137 903 aa15.95■□□□□ 0.14
PCDHA4-202ENST00000512229 DDX49Q9Y6V7 483 aaKnown RBP15.95■□□□□ 0.14
PCDHA4-202ENST00000512229 NCKAP5LQ9HCH0 1330 aa15.95■□□□□ 0.14
PCDHA4-202ENST00000512229 SRGAP3O43295 1099 aa15.94■□□□□ 0.14
PCDHA4-202ENST00000512229 KCNA6P17658 529 aa15.94■□□□□ 0.14
PCDHA4-202ENST00000512229 MBIPQ9NS73 344 aa15.94■□□□□ 0.14
PCDHA4-202ENST00000512229 YEATS2Q9ULM3 1422 aa15.94■□□□□ 0.14
PCDHA4-202ENST00000512229 MPRIPQ6WCQ1 1025 aa15.94■□□□□ 0.14
PCDHA4-202ENST00000512229 ERC1Q8IUD2 1116 aa15.94■□□□□ 0.14
PCDHA4-202ENST00000512229 ERCC6L2Q5T890 1561 aa15.94■□□□□ 0.14
PCDHA4-202ENST00000512229 CHMP4CQ96CF2 233 aa15.94■□□□□ 0.14
PCDHA4-202ENST00000512229 ATP6V1DQ9Y5K8 247 aa15.94■□□□□ 0.14
PCDHA4-202ENST00000512229 G3V3G9 751 aa15.93■□□□□ 0.14
PCDHA4-202ENST00000512229 DCAF8Q5TAQ9 597 aa15.93■□□□□ 0.14
PCDHA4-202ENST00000512229 SKAP1Q86WV1 359 aa15.93■□□□□ 0.14
PCDHA4-202ENST00000512229 FOXD4L6Q3SYB3 417 aaPredicted RBP15.92■□□□□ 0.14
PCDHA4-202ENST00000512229 FOXD4L3Q6VB84 417 aaPredicted RBP15.92■□□□□ 0.14
PCDHA4-202ENST00000512229 FAM184AQ8NB25 1140 aa15.92■□□□□ 0.14
PCDHA4-202ENST00000512229 ABCC1P33527 1531 aa15.92■□□□□ 0.14
PCDHA4-202ENST00000512229 NRDCO43847 1150 aa15.92■□□□□ 0.14
PCDHA4-202ENST00000512229 PLEKHH1Q9ULM0 1364 aa15.92■□□□□ 0.14
PCDHA4-202ENST00000512229 GOLGA6L6A8MZA4 724 aa15.92■□□□□ 0.14
PCDHA4-202ENST00000512229 EIF4A2Q14240 407 aaKnown RBP15.92■□□□□ 0.14
PCDHA4-202ENST00000512229 KIF6Q6ZMV9 814 aa15.92■□□□□ 0.14
PCDHA4-202ENST00000512229 NUTM2BA6NNL0 878 aaPredicted RBP15.91■□□□□ 0.14
PCDHA4-202ENST00000512229 NUTM2EB1AL46 878 aaPredicted RBP15.91■□□□□ 0.14
PCDHA4-202ENST00000512229 APPP05067 770 aa15.91■□□□□ 0.14
PCDHA4-202ENST00000512229 NUTM2AQ8IVF1 878 aaPredicted RBP15.91■□□□□ 0.14
PCDHA4-202ENST00000512229 AEBP2Q6ZN18 517 aaPredicted RBP15.91■□□□□ 0.14
PCDHA4-202ENST00000512229 AEBP1Q8IUX7 1158 aa15.91■□□□□ 0.14
PCDHA4-202ENST00000512229 FSD1Q9BTV5 496 aa15.91■□□□□ 0.14
PCDHA4-202ENST00000512229 F6X3S4 739 aa15.91■□□□□ 0.14
PCDHA4-202ENST00000512229 SKOR2Q2VWA4 1001 aaPredicted RBP15.9■□□□□ 0.14
PCDHA4-202ENST00000512229 PREX2Q70Z35 1606 aa15.9■□□□□ 0.14
PCDHA4-202ENST00000512229 MLH3Q9UHC1 1453 aa15.9■□□□□ 0.14
PCDHA4-202ENST00000512229 H3BQV1 296 aa15.9■□□□□ 0.14
PCDHA4-202ENST00000512229 IFFO2Q5TF58 517 aa15.9■□□□□ 0.14
PCDHA4-202ENST00000512229 EXOC6BQ9Y2D4 811 aa15.9■□□□□ 0.14
PCDHA4-202ENST00000512229 NUCB2P80303 420 aa15.9■□□□□ 0.14
PCDHA4-202ENST00000512229 VPS37DQ86XT2 251 aa15.9■□□□□ 0.14
PCDHA4-202ENST00000512229 MSH5O43196 834 aa15.9■□□□□ 0.14
PCDHA4-202ENST00000512229 CDK11BP21127 795 aaKnown RBP15.9■□□□□ 0.14
PCDHA4-202ENST00000512229 MSNP26038 577 aaKnown RBP15.89■□□□□ 0.13
PCDHA4-202ENST00000512229 GSE1Q14687 1217 aa15.89■□□□□ 0.13
PCDHA4-202ENST00000512229 CPLX2Q6PUV4 134 aaKnown RBP15.89■□□□□ 0.13
PCDHA4-202ENST00000512229 IL1RAPL2Q9NP60 686 aa15.89■□□□□ 0.13
PCDHA4-202ENST00000512229 PTCD1O75127 700 aaKnown RBP15.88■□□□□ 0.13
PCDHA4-202ENST00000512229 NEK4P51957 841 aa15.88■□□□□ 0.13
PCDHA4-202ENST00000512229 SIL1Q9H173 461 aa15.88■□□□□ 0.13
PCDHA4-202ENST00000512229 FAM177BA6PVY3 158 aa15.88■□□□□ 0.13
PCDHA4-202ENST00000512229 ZCCHC11Q5TAX3 1644 aaKnown RBP15.88■□□□□ 0.13
PCDHA4-202ENST00000512229 PTPRTO14522 1441 aa15.88■□□□□ 0.13
PCDHA4-202ENST00000512229 PTPRCP08575 1304 aa15.88■□□□□ 0.13
PCDHA4-202ENST00000512229 FLIIQ13045 1269 aa15.88■□□□□ 0.13
PCDHA4-202ENST00000512229 TRDNQ13061 729 aa15.88■□□□□ 0.13
PCDHA4-202ENST00000512229 NFKBIBQ15653 356 aa15.88■□□□□ 0.13
PCDHA4-202ENST00000512229 DRC7Q8IY82 874 aa15.88■□□□□ 0.13
PCDHA4-202ENST00000512229 ANKRD24Q8TF21 1146 aa15.88■□□□□ 0.13
PCDHA4-202ENST00000512229 SF3A1Q15459 793 aaKnown RBP15.87■□□□□ 0.13
PCDHA4-202ENST00000512229 PHACTR3Q96KR7 559 aa15.87■□□□□ 0.13
PCDHA4-202ENST00000512229 DBF4Q9UBU7 674 aaPredicted RBP15.87■□□□□ 0.13
PCDHA4-202ENST00000512229 RABEP1Q15276 862 aa15.87■□□□□ 0.13
PCDHA4-202ENST00000512229 SBNO2Q9Y2G9 1366 aa15.87■□□□□ 0.13
PCDHA4-202ENST00000512229 WASHC4Q2M389 1173 aa15.87■□□□□ 0.13
PCDHA4-202ENST00000512229 C19orf44Q9H6X5 657 aa15.87■□□□□ 0.13
PCDHA4-202ENST00000512229 ARHGAP45Q92619 1136 aa15.87■□□□□ 0.13
PCDHA4-202ENST00000512229 PHF14O94880 888 aa15.86■□□□□ 0.13
PCDHA4-202ENST00000512229 LARP1Q6PKG0 1096 aaKnown RBP15.86■□□□□ 0.13
PCDHA4-202ENST00000512229 SMC3Q9UQE7 1217 aa15.86■□□□□ 0.13
PCDHA4-202ENST00000512229 HIP1O00291 1037 aa15.86■□□□□ 0.13
PCDHA4-202ENST00000512229 SYNE3Q6ZMZ3 975 aa15.85■□□□□ 0.13
PCDHA4-202ENST00000512229 FLT4P35916 1363 aa15.85■□□□□ 0.13
PCDHA4-202ENST00000512229 ZFYVE16Q7Z3T8 1539 aa15.85■□□□□ 0.13
PCDHA4-202ENST00000512229 IGHDP01880 384 aa15.85■□□□□ 0.13
PCDHA4-202ENST00000512229 TMEM2Q9UHN6 1383 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms