RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 RBM33Q96EV2 1170 aaKnown RBP13.08□□□□□ -0.31
CPNE4-209ENST00000512055 AIMP1Q12904 312 aaKnown RBP13.08□□□□□ -0.32
CPNE4-209ENST00000512055 MBD5Q9P267 1494 aa13.08□□□□□ -0.32
CPNE4-209ENST00000512055 LEKR1Q6ZMV7 388 aa13.08□□□□□ -0.32
CPNE4-209ENST00000512055 SPATA31E1Q6ZUB1 1445 aa13.08□□□□□ -0.32
CPNE4-209ENST00000512055 MCM10Q7L590 875 aa13.08□□□□□ -0.32
CPNE4-209ENST00000512055 TTC5Q8N0Z6 440 aa13.08□□□□□ -0.32
CPNE4-209ENST00000512055 NINLQ9Y2I6 1382 aa13.08□□□□□ -0.32
CPNE4-209ENST00000512055 XPCQ01831 940 aaPredicted RBP13.07□□□□□ -0.32
CPNE4-209ENST00000512055 RAPGEF4Q8WZA2 1011 aa13.07□□□□□ -0.32
CPNE4-209ENST00000512055 ATF3P18847 181 aa13.07□□□□□ -0.32
CPNE4-209ENST00000512055 ANO2Q9NQ90 1003 aa13.07□□□□□ -0.32
CPNE4-209ENST00000512055 FYB1O15117 783 aa13.06□□□□□ -0.32
CPNE4-209ENST00000512055 REC8O95072 547 aa13.06□□□□□ -0.32
CPNE4-209ENST00000512055 LRPPRCP42704 1394 aaKnown RBP13.06□□□□□ -0.32
CPNE4-209ENST00000512055 PROSER2Q86WR7 435 aaPredicted RBP13.06□□□□□ -0.32
CPNE4-209ENST00000512055 COL17A1Q9UMD9 1497 aaPredicted RBP13.06□□□□□ -0.32
CPNE4-209ENST00000512055 TPM2P07951 284 aa13.06□□□□□ -0.32
CPNE4-209ENST00000512055 NEXNQ0ZGT2 675 aa13.06□□□□□ -0.32
CPNE4-209ENST00000512055 ZNF428Q96B54 188 aa13.06□□□□□ -0.32
CPNE4-209ENST00000512055 ABCA8O94911 1581 aa13.06□□□□□ -0.32
CPNE4-209ENST00000512055 UBTFL1P0CB47 393 aaPredicted RBP13.06□□□□□ -0.32
CPNE4-209ENST00000512055 PLEKHH1Q9ULM0 1364 aa13.05□□□□□ -0.32
CPNE4-209ENST00000512055 EVA1CP58658 441 aa13.05□□□□□ -0.32
CPNE4-209ENST00000512055 CCDC30Q5VVM6 783 aa13.05□□□□□ -0.32
CPNE4-209ENST00000512055 IL27Q8NEV9 243 aa13.05□□□□□ -0.32
CPNE4-209ENST00000512055 TPD52L1Q16890 204 aaPredicted RBP13.05□□□□□ -0.32
CPNE4-209ENST00000512055 CHMP5Q9NZZ3 219 aa13.05□□□□□ -0.32
CPNE4-209ENST00000512055 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.05□□□□□ -0.32
CPNE4-209ENST00000512055 TPM1P09493 284 aa13.05□□□□□ -0.32
CPNE4-209ENST00000512055 INTS3Q68E01 1043 aaKnown RBP13.05□□□□□ -0.32
CPNE4-209ENST00000512055 AMOTL2Q9Y2J4 779 aa13.05□□□□□ -0.32
CPNE4-209ENST00000512055 GPATCH11Q8N954 259 aa13.04□□□□□ -0.32
CPNE4-209ENST00000512055 KRI1Q8N9T8 703 aaKnown RBP13.04□□□□□ -0.32
CPNE4-209ENST00000512055 EIF2AK4Q9P2K8 1649 aaKnown RBP13.04□□□□□ -0.32
CPNE4-209ENST00000512055 CDC45O75419 566 aa13.04□□□□□ -0.32
CPNE4-209ENST00000512055 TNNT1P13805 278 aa13.04□□□□□ -0.32
CPNE4-209ENST00000512055 IFT57Q9NWB7 429 aa13.04□□□□□ -0.32
CPNE4-209ENST00000512055 FRAT2O75474 233 aaPredicted RBP13.04□□□□□ -0.32
CPNE4-209ENST00000512055 DIAPH3Q9NSV4 1193 aa13.04□□□□□ -0.32
CPNE4-209ENST00000512055 SKOR2Q2VWA4 1001 aaPredicted RBP13.03□□□□□ -0.32
CPNE4-209ENST00000512055 GIMAP7Q8NHV1 300 aa13.03□□□□□ -0.32
CPNE4-209ENST00000512055 GCC1Q96CN9 775 aa13.03□□□□□ -0.32
CPNE4-209ENST00000512055 ADGBQ8N7X0 1667 aa13.03□□□□□ -0.32
CPNE4-209ENST00000512055 IGHDP01880 384 aa13.03□□□□□ -0.32
CPNE4-209ENST00000512055 SF3A1Q15459 793 aaKnown RBP13.03□□□□□ -0.32
CPNE4-209ENST00000512055 ANKLE2Q86XL3 938 aa13.03□□□□□ -0.32
CPNE4-209ENST00000512055 MAST1Q9Y2H9 1570 aa13.03□□□□□ -0.32
CPNE4-209ENST00000512055 TRIM27P14373 513 aa13.03□□□□□ -0.32
CPNE4-209ENST00000512055 HDGFL1Q5TGJ6 251 aa13.03□□□□□ -0.32
CPNE4-209ENST00000512055 IPO7O95373 1038 aaKnown RBP13.03□□□□□ -0.32
CPNE4-209ENST00000512055 IFIT2P09913 472 aaKnown RBP13.03□□□□□ -0.32
CPNE4-209ENST00000512055 CHD1LQ86WJ1 897 aa13.03□□□□□ -0.32
CPNE4-209ENST00000512055 IPO4Q8TEX9 1081 aaKnown RBP13.03□□□□□ -0.32
CPNE4-209ENST00000512055 ANKRD36BQ8N2N9 1353 aa13.02□□□□□ -0.32
CPNE4-209ENST00000512055 DDX58O95786 925 aaKnown RBP13.02□□□□□ -0.32
CPNE4-209ENST00000512055 USP8P40818 1118 aa13.02□□□□□ -0.32
CPNE4-209ENST00000512055 SPINK5Q9NQ38 1064 aaPredicted RBP13.02□□□□□ -0.32
CPNE4-209ENST00000512055 ATP7AQ04656 1500 aa13.02□□□□□ -0.33
CPNE4-209ENST00000512055 FAM83GA6ND36 823 aa13.02□□□□□ -0.33
CPNE4-209ENST00000512055 SURF6O75683 361 aaKnown RBP13.02□□□□□ -0.33
CPNE4-209ENST00000512055 PHF23Q9BUL5 403 aaPredicted RBP13.02□□□□□ -0.33
CPNE4-209ENST00000512055 NSD2O96028 1365 aa13.01□□□□□ -0.33
CPNE4-209ENST00000512055 GNAI3P08754 354 aa13.01□□□□□ -0.33
CPNE4-209ENST00000512055 ZRANB1Q9UGI0 708 aa13.01□□□□□ -0.33
CPNE4-209ENST00000512055 RIC3Q7Z5B4 369 aa13.01□□□□□ -0.33
CPNE4-209ENST00000512055 POGZQ7Z3K3 1410 aa13.01□□□□□ -0.33
CPNE4-209ENST00000512055 ZNF530Q6P9A1 599 aaPredicted RBP13.01□□□□□ -0.33
CPNE4-209ENST00000512055 CFAP65Q6ZU64 1925 aaKnown RBP13.01□□□□□ -0.33
CPNE4-209ENST00000512055 PLEKHO1Q53GL0 409 aaPredicted RBP13□□□□□ -0.33
CPNE4-209ENST00000512055 SAMD9LQ8IVG5 1584 aa13□□□□□ -0.33
CPNE4-209ENST00000512055 BRPF3Q9ULD4 1205 aa13□□□□□ -0.33
CPNE4-209ENST00000512055 ERICH4A6NGS2 130 aa13□□□□□ -0.33
CPNE4-209ENST00000512055 GNAI2P04899 355 aa13□□□□□ -0.33
CPNE4-209ENST00000512055 G3BP1Q13283 466 aaKnown RBP eCLIP13□□□□□ -0.33
CPNE4-209ENST00000512055 USHBP1Q8N6Y0 703 aa13□□□□□ -0.33
CPNE4-209ENST00000512055 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13□□□□□ -0.33
CPNE4-209ENST00000512055 TNNQ9UQP3 1299 aa13□□□□□ -0.33
CPNE4-209ENST00000512055 INCENPQ9NQS7 918 aa13□□□□□ -0.33
CPNE4-209ENST00000512055 ARHGEF5Q12774 1597 aa13□□□□□ -0.33
CPNE4-209ENST00000512055 ABCC11Q96J66 1382 aa13□□□□□ -0.33
CPNE4-209ENST00000512055 IBSPP21815 317 aaPredicted RBP12.99□□□□□ -0.33
CPNE4-209ENST00000512055 KIAA0754O94854 1291 aa12.99□□□□□ -0.33
CPNE4-209ENST00000512055 AXDND1Q5T1B0 1012 aaPredicted RBP12.99□□□□□ -0.33
CPNE4-209ENST00000512055 PPP6R1Q9UPN7 881 aa12.99□□□□□ -0.33
CPNE4-209ENST00000512055 RRP9O43818 475 aaKnown RBP12.99□□□□□ -0.33
CPNE4-209ENST00000512055 SYTL4Q96C24 671 aaPredicted RBP12.99□□□□□ -0.33
CPNE4-209ENST00000512055 CENPHQ9H3R5 247 aa12.99□□□□□ -0.33
CPNE4-209ENST00000512055 ACEP12821 1306 aa12.98□□□□□ -0.33
CPNE4-209ENST00000512055 NCKAP5LQ9HCH0 1330 aa12.98□□□□□ -0.33
CPNE4-209ENST00000512055 BBXQ8WY36 941 aaPredicted RBP12.98□□□□□ -0.33
CPNE4-209ENST00000512055 POLR3AO14802 1390 aaPredicted RBP12.98□□□□□ -0.33
CPNE4-209ENST00000512055 ZC3H6P61129 1189 aaKnown RBP12.97□□□□□ -0.33
CPNE4-209ENST00000512055 ALDH1L2Q3SY69 923 aa12.97□□□□□ -0.33
CPNE4-209ENST00000512055 BCCIPQ9P287 314 aaKnown RBP eCLIP12.97□□□□□ -0.33
CPNE4-209ENST00000512055 PIK3C2GO75747 1445 aa12.97□□□□□ -0.33
CPNE4-209ENST00000512055 TTC37Q6PGP7 1564 aa12.97□□□□□ -0.33
CPNE4-209ENST00000512055 CCT4P50991 539 aaKnown RBP12.97□□□□□ -0.33
CPNE4-209ENST00000512055 PCDHB15Q9Y5E8 787 aa12.97□□□□□ -0.33
CPNE4-209ENST00000512055 RUFY2Q8WXA3 655 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms