RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 SMYD5Q6GMV2 418 aa6.49□□□□□ -1.37
TRAPPC11-208ENST00000511955 EFCAB6Q5THR3 1501 aa6.48□□□□□ -1.37
TRAPPC11-208ENST00000511955 ARID4AP29374 1257 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC11-208ENST00000511955 IDI1Q13907 227 aa6.48□□□□□ -1.37
TRAPPC11-208ENST00000511955 CCER1Q8TC90 406 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC11-208ENST00000511955 ERVK-7P63135 1459 aa6.48□□□□□ -1.37
TRAPPC11-208ENST00000511955 LMTK3Q96Q04 1460 aa6.48□□□□□ -1.37
TRAPPC11-208ENST00000511955 MROH2AA6NES4 1674 aa6.48□□□□□ -1.37
TRAPPC11-208ENST00000511955 ZC3H13Q5T200 1668 aaKnown RBP6.48□□□□□ -1.37
TRAPPC11-208ENST00000511955 U2SURPO15042 1029 aaKnown RBP6.48□□□□□ -1.37
TRAPPC11-208ENST00000511955 SOX12O15370 315 aa6.48□□□□□ -1.37
TRAPPC11-208ENST00000511955 APLP1P51693 650 aa6.48□□□□□ -1.37
TRAPPC11-208ENST00000511955 MAGEC2Q9UBF1 373 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC11-208ENST00000511955 VWDEQ8N2E2 1590 aa6.47□□□□□ -1.37
TRAPPC11-208ENST00000511955 IQGAP3Q86VI3 1631 aa6.47□□□□□ -1.37
TRAPPC11-208ENST00000511955 SF3A1Q15459 793 aaKnown RBP6.47□□□□□ -1.37
TRAPPC11-208ENST00000511955 E2F4Q16254 413 aa6.47□□□□□ -1.37
TRAPPC11-208ENST00000511955 WDR78Q5VTH9 848 aa6.47□□□□□ -1.37
TRAPPC11-208ENST00000511955 MIER1Q8N108 512 aa6.47□□□□□ -1.37
TRAPPC11-208ENST00000511955 RYDENQ9NUL5 291 aaKnown RBP6.47□□□□□ -1.37
TRAPPC11-208ENST00000511955 E9PCH4 1651 aa6.47□□□□□ -1.37
TRAPPC11-208ENST00000511955 PREX1Q8TCU6 1659 aa6.47□□□□□ -1.37
TRAPPC11-208ENST00000511955 hCG_2014768A0A024R1R8 64 aa6.47□□□□□ -1.37
TRAPPC11-208ENST00000511955 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.47□□□□□ -1.37
TRAPPC11-208ENST00000511955 RGL3Q3MIN7 710 aa6.47□□□□□ -1.37
TRAPPC11-208ENST00000511955 CCDC181Q5TID7 509 aa6.47□□□□□ -1.37
TRAPPC11-208ENST00000511955 NCKAP5LQ9HCH0 1330 aa6.46□□□□□ -1.37
TRAPPC11-208ENST00000511955 MYO3AQ8NEV4 1616 aa6.46□□□□□ -1.37
TRAPPC11-208ENST00000511955 TET3O43151 1660 aa6.46□□□□□ -1.38
TRAPPC11-208ENST00000511955 RBM42Q9BTD8 480 aaKnown RBP6.46□□□□□ -1.38
TRAPPC11-208ENST00000511955 TMX4Q9H1E5 349 aaPredicted RBP6.46□□□□□ -1.38
TRAPPC11-208ENST00000511955 USTQ9Y2C2 406 aa6.46□□□□□ -1.38
TRAPPC11-208ENST00000511955 LMTK2Q8IWU2 1503 aa6.46□□□□□ -1.38
TRAPPC11-208ENST00000511955 CSB-PGBD3P0DP91 1061 aa6.45□□□□□ -1.38
TRAPPC11-208ENST00000511955 GTF2E1P29083 439 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC11-208ENST00000511955 CNGB1Q14028 1251 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC11-208ENST00000511955 CLEC4GQ6UXB4 293 aa6.45□□□□□ -1.38
TRAPPC11-208ENST00000511955 COG6Q9Y2V7 657 aa6.45□□□□□ -1.38
TRAPPC11-208ENST00000511955 ARHGAP31Q2M1Z3 1444 aa6.45□□□□□ -1.38
TRAPPC11-208ENST00000511955 SYNMO15061 1565 aa6.45□□□□□ -1.38
TRAPPC11-208ENST00000511955 CEP170BQ9Y4F5 1589 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC11-208ENST00000511955 RFX1P22670 979 aa6.45□□□□□ -1.38
TRAPPC11-208ENST00000511955 SSFA2P28290 1259 aa6.45□□□□□ -1.38
TRAPPC11-208ENST00000511955 POLD1P28340 1107 aa6.45□□□□□ -1.38
TRAPPC11-208ENST00000511955 THEMISQ8N1K5 641 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC11-208ENST00000511955 CALR3Q96L12 384 aaKnown RBP6.45□□□□□ -1.38
TRAPPC11-208ENST00000511955 SPATA31D1Q6ZQQ2 1576 aa6.45□□□□□ -1.38
TRAPPC11-208ENST00000511955 IGBP1P78318 339 aa6.44□□□□□ -1.38
TRAPPC11-208ENST00000511955 ARMCX6Q7L4S7 300 aa6.44□□□□□ -1.38
TRAPPC11-208ENST00000511955 LARGE2Q8N3Y3 721 aa6.44□□□□□ -1.38
TRAPPC11-208ENST00000511955 GIPC2Q8TF65 315 aa6.44□□□□□ -1.38
TRAPPC11-208ENST00000511955 PCMTD1Q96MG8 357 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC11-208ENST00000511955 BCL2L13Q9BXK5 485 aa6.44□□□□□ -1.38
TRAPPC11-208ENST00000511955 FAN1Q9Y2M0 1017 aa6.44□□□□□ -1.38
TRAPPC11-208ENST00000511955 EPB41L2O43491 1005 aaKnown RBP6.44□□□□□ -1.38
TRAPPC11-208ENST00000511955 PSME1Q06323 249 aa6.44□□□□□ -1.38
TRAPPC11-208ENST00000511955 MAF1Q9H063 256 aa6.44□□□□□ -1.38
TRAPPC11-208ENST00000511955 TMA7Q9Y2S6 64 aaKnown RBP6.44□□□□□ -1.38
TRAPPC11-208ENST00000511955 NOS1P29475 1434 aa6.44□□□□□ -1.38
TRAPPC11-208ENST00000511955 A2ML1A8K2U0 1454 aa6.43□□□□□ -1.38
TRAPPC11-208ENST00000511955 PIK3C2BO00750 1634 aa6.43□□□□□ -1.38
TRAPPC11-208ENST00000511955 WDHD1O75717 1129 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC11-208ENST00000511955 RPRD2Q5VT52 1461 aaKnown RBP6.43□□□□□ -1.38
TRAPPC11-208ENST00000511955 CASC1Q6TDU7 716 aa6.43□□□□□ -1.38
TRAPPC11-208ENST00000511955 SDR16C5Q8N3Y7 309 aa6.43□□□□□ -1.38
TRAPPC11-208ENST00000511955 CHPF2Q9P2E5 772 aa6.43□□□□□ -1.38
TRAPPC11-208ENST00000511955 SETD1BQ9UPS6 1966 aaKnown RBP6.43□□□□□ -1.38
TRAPPC11-208ENST00000511955 PLA2R1Q13018 1463 aa6.43□□□□□ -1.38
TRAPPC11-208ENST00000511955 NLRP1Q9C000 1473 aa6.43□□□□□ -1.38
TRAPPC11-208ENST00000511955 CCDC144AA2RUR9 1427 aa6.43□□□□□ -1.38
TRAPPC11-208ENST00000511955 LTKP29376 864 aa6.43□□□□□ -1.38
TRAPPC11-208ENST00000511955 MAMSTRQ6ZN01 415 aa6.43□□□□□ -1.38
TRAPPC11-208ENST00000511955 PARP9Q8IXQ6 854 aa6.43□□□□□ -1.38
TRAPPC11-208ENST00000511955 PBXIP1Q96AQ6 731 aa6.43□□□□□ -1.38
TRAPPC11-208ENST00000511955 AKT1S1Q96B36 256 aa6.43□□□□□ -1.38
TRAPPC11-208ENST00000511955 SIN3AQ96ST3 1273 aa6.43□□□□□ -1.38
TRAPPC11-208ENST00000511955 GOPCQ9HD26 462 aa6.43□□□□□ -1.38
TRAPPC11-208ENST00000511955 ZBTB47Q9UFB7 747 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC11-208ENST00000511955 TTC36A6NLP5 189 aa6.42□□□□□ -1.38
TRAPPC11-208ENST00000511955 LIG1P18858 919 aa6.42□□□□□ -1.38
TRAPPC11-208ENST00000511955 CALRP27797 417 aaKnown RBP6.42□□□□□ -1.38
TRAPPC11-208ENST00000511955 RHBDL3P58872 404 aa6.42□□□□□ -1.38
TRAPPC11-208ENST00000511955 PTPROQ16827 1216 aa6.42□□□□□ -1.38
TRAPPC11-208ENST00000511955 CCDC96Q2M329 555 aa6.42□□□□□ -1.38
TRAPPC11-208ENST00000511955 ZNF280DQ6N043 979 aa6.42□□□□□ -1.38
TRAPPC11-208ENST00000511955 ANKLE2Q86XL3 938 aa6.42□□□□□ -1.38
TRAPPC11-208ENST00000511955 SLC26A8Q96RN1 970 aa6.42□□□□□ -1.38
TRAPPC11-208ENST00000511955 EID1Q9Y6B2 187 aa6.42□□□□□ -1.38
TRAPPC11-208ENST00000511955 SPHKAPQ2M3C7 1700 aa6.42□□□□□ -1.38
TRAPPC11-208ENST00000511955 EIF3JO75822 258 aaKnown RBP6.42□□□□□ -1.38
TRAPPC11-208ENST00000511955 HSP90AB2PQ58FF8 381 aa6.42□□□□□ -1.38
TRAPPC11-208ENST00000511955 CLTCL1P53675 1640 aa6.41□□□□□ -1.38
TRAPPC11-208ENST00000511955 ZNF500O60304 480 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC11-208ENST00000511955 TBC1D12O60347 775 aa6.41□□□□□ -1.38
TRAPPC11-208ENST00000511955 C11orf96Q7Z7L8 435 aa6.41□□□□□ -1.38
TRAPPC11-208ENST00000511955 CXorf38Q8TB03 319 aa6.41□□□□□ -1.38
TRAPPC11-208ENST00000511955 GNL3LQ9NVN8 582 aaKnown RBP6.41□□□□□ -1.38
TRAPPC11-208ENST00000511955 SH3BP1Q9Y3L3 701 aa6.41□□□□□ -1.38
TRAPPC11-208ENST00000511955 EXOC5O00471 708 aa6.41□□□□□ -1.38
TRAPPC11-208ENST00000511955 DNAJC14Q6Y2X3 702 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms