RNA–Protein interactions for RNA: ENST00000511905.5

SPOCK3-219, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2

Gene SPOCK3, Length 1,700 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-219ENST00000511905 ARHGAP23Q9P227 1491 aa26.26■■□□□ 1.79
SPOCK3-219ENST00000511905 PRR36Q9H6K5 1346 aa26.26■■□□□ 1.79
SPOCK3-219ENST00000511905 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.24■■□□□ 1.79
SPOCK3-219ENST00000511905 PIK3R4Q99570 1358 aa26.24■■□□□ 1.79
SPOCK3-219ENST00000511905 ZBTB40Q9NUA8 1239 aa26.23■■□□□ 1.79
SPOCK3-219ENST00000511905 USP19O94966 1318 aa26.23■■□□□ 1.79
SPOCK3-219ENST00000511905 PHACTR3Q96KR7 559 aa26.22■■□□□ 1.79
SPOCK3-219ENST00000511905 DEKP35659 375 aaKnown RBP26.22■■□□□ 1.79
SPOCK3-219ENST00000511905 OVOS2A0A0J9YW53 1432 aa26.22■■□□□ 1.79
SPOCK3-219ENST00000511905 OVOS2Q6IE36 1432 aa26.22■■□□□ 1.79
SPOCK3-219ENST00000511905 DIP2AQ14689 1571 aa26.21■■□□□ 1.79
SPOCK3-219ENST00000511905 SMC5Q8IY18 1101 aa26.21■■□□□ 1.79
SPOCK3-219ENST00000511905 TTC21BQ7Z4L5 1316 aa26.21■■□□□ 1.79
SPOCK3-219ENST00000511905 NALCNQ8IZF0 1738 aa26.21■■□□□ 1.79
SPOCK3-219ENST00000511905 USP31Q70CQ4 1352 aa26.2■■□□□ 1.79
SPOCK3-219ENST00000511905 PTCH1Q13635 1447 aa26.2■■□□□ 1.79
SPOCK3-219ENST00000511905 VAMP4O75379 141 aa26.19■■□□□ 1.78
SPOCK3-219ENST00000511905 ITPRIPQ8IWB1 547 aa26.19■■□□□ 1.78
SPOCK3-219ENST00000511905 TBX22Q9Y458 520 aa26.19■■□□□ 1.78
SPOCK3-219ENST00000511905 EID1Q9Y6B2 187 aa26.19■■□□□ 1.78
SPOCK3-219ENST00000511905 FBLN1P23142 703 aa26.19■■□□□ 1.78
SPOCK3-219ENST00000511905 TMEM57Q8N5G2 664 aa26.19■■□□□ 1.78
SPOCK3-219ENST00000511905 CFAP44Q96MT7 982 aa26.19■■□□□ 1.78
SPOCK3-219ENST00000511905 USP6P35125 1406 aa26.18■■□□□ 1.78
SPOCK3-219ENST00000511905 SSH2Q76I76 1423 aa26.18■■□□□ 1.78
SPOCK3-219ENST00000511905 HMOX1P09601 288 aa26.18■■□□□ 1.78
SPOCK3-219ENST00000511905 LTKP29376 864 aa26.18■■□□□ 1.78
SPOCK3-219ENST00000511905 ZRANB1Q9UGI0 708 aa26.17■■□□□ 1.78
SPOCK3-219ENST00000511905 MRPL50Q8N5N7 158 aaKnown RBP26.17■■□□□ 1.78
SPOCK3-219ENST00000511905 UPF2Q9HAU5 1272 aaKnown RBP26.16■■□□□ 1.78
SPOCK3-219ENST00000511905 ACEP12821 1306 aa26.15■■□□□ 1.78
SPOCK3-219ENST00000511905 TTC21AQ8NDW8 1320 aa26.15■■□□□ 1.78
SPOCK3-219ENST00000511905 PTPRUQ92729 1446 aa26.15■■□□□ 1.78
SPOCK3-219ENST00000511905 KIF24Q5T7B8 1368 aa26.15■■□□□ 1.78
SPOCK3-219ENST00000511905 HAP1P54257 671 aaPredicted RBP26.14■■□□□ 1.78
SPOCK3-219ENST00000511905 NCKAP5LQ9HCH0 1330 aa26.14■■□□□ 1.77
SPOCK3-219ENST00000511905 DLG5Q8TDM6 1919 aa26.13■■□□□ 1.77
SPOCK3-219ENST00000511905 LAS1LQ9Y4W2 734 aaKnown RBP26.13■■□□□ 1.77
SPOCK3-219ENST00000511905 BECN1Q14457 450 aa26.11■■□□□ 1.77
SPOCK3-219ENST00000511905 RRS1Q15050 365 aaKnown RBP26.11■■□□□ 1.77
SPOCK3-219ENST00000511905 MBIPQ9NS73 344 aa26.11■■□□□ 1.77
SPOCK3-219ENST00000511905 RIMS1Q86UR5 1692 aaKnown RBP26.11■■□□□ 1.77
SPOCK3-219ENST00000511905 RGPD1P0DJD0 1748 aa26.11■■□□□ 1.77
SPOCK3-219ENST00000511905 TBC1D32Q96NH3 1257 aa26.1■■□□□ 1.77
SPOCK3-219ENST00000511905 EIF4A2Q14240 407 aaKnown RBP26.09■■□□□ 1.77
SPOCK3-219ENST00000511905 ABCC4O15439 1325 aa26.09■■□□□ 1.77
SPOCK3-219ENST00000511905 SEC24BO95487 1268 aa26.08■■□□□ 1.77
SPOCK3-219ENST00000511905 ZBTB7BO15156 539 aaPredicted RBP26.08■■□□□ 1.76
SPOCK3-219ENST00000511905 THEMISQ8N1K5 641 aaPredicted RBP26.08■■□□□ 1.76
SPOCK3-219ENST00000511905 API5Q9BZZ5 524 aaKnown RBP26.08■■□□□ 1.76
SPOCK3-219ENST00000511905 NUCB1Q02818 461 aa26.07■■□□□ 1.76
SPOCK3-219ENST00000511905 TWISTNBQ3B726 338 aaPredicted RBP26.07■■□□□ 1.76
SPOCK3-219ENST00000511905 ARHGEF10O15013 1369 aa26.06■■□□□ 1.76
SPOCK3-219ENST00000511905 ANKARQ7Z5J8 1434 aa26.06■■□□□ 1.76
SPOCK3-219ENST00000511905 GCC1Q96CN9 775 aa26.05■■□□□ 1.76
SPOCK3-219ENST00000511905 AMOTL2Q9Y2J4 779 aa26.05■■□□□ 1.76
SPOCK3-219ENST00000511905 KIAA0232Q92628 1395 aa26.05■■□□□ 1.76
SPOCK3-219ENST00000511905 XRN1Q8IZH2 1706 aaKnown RBP26.04■■□□□ 1.76
SPOCK3-219ENST00000511905 TSPYL6Q8N831 410 aa26.04■■□□□ 1.76
SPOCK3-219ENST00000511905 THUMPD2Q9BTF0 503 aaKnown RBP26.04■■□□□ 1.76
SPOCK3-219ENST00000511905 FER1L4A9Z1Z3 1794 aa26.04■■□□□ 1.76
SPOCK3-219ENST00000511905 PEAK1Q9H792 1746 aa26.03■■□□□ 1.76
SPOCK3-219ENST00000511905 NFKBIBQ15653 356 aa26.02■■□□□ 1.76
SPOCK3-219ENST00000511905 SLC4A3P48751 1232 aa26.02■■□□□ 1.76
SPOCK3-219ENST00000511905 CHL1O00533 1208 aa26.01■■□□□ 1.75
SPOCK3-219ENST00000511905 SBNO1A3KN83 1393 aa26■■□□□ 1.75
SPOCK3-219ENST00000511905 SULT6B1Q6IMI4 303 aa26■■□□□ 1.75
SPOCK3-219ENST00000511905 USP54Q70EL1 1684 aa26■■□□□ 1.75
SPOCK3-219ENST00000511905 C8orf58Q8NAV2 365 aa26■■□□□ 1.75
SPOCK3-219ENST00000511905 SLC26A8Q96RN1 970 aa25.99■■□□□ 1.75
SPOCK3-219ENST00000511905 FLT4P35916 1363 aa25.98■■□□□ 1.75
SPOCK3-219ENST00000511905 CEBPAP49715 358 aaPredicted RBP25.98■■□□□ 1.75
SPOCK3-219ENST00000511905 CHD1LQ86WJ1 897 aa25.98■■□□□ 1.75
SPOCK3-219ENST00000511905 KDRP35968 1356 aa25.98■■□□□ 1.75
SPOCK3-219ENST00000511905 FMN2Q9NZ56 1722 aa25.97■■□□□ 1.75
SPOCK3-219ENST00000511905 INTS3Q68E01 1043 aaKnown RBP25.95■■□□□ 1.74
SPOCK3-219ENST00000511905 AEBP1Q8IUX7 1158 aa25.94■■□□□ 1.74
SPOCK3-219ENST00000511905 CRB1P82279 1406 aa25.94■■□□□ 1.74
SPOCK3-219ENST00000511905 FAM83GA6ND36 823 aa25.94■■□□□ 1.74
SPOCK3-219ENST00000511905 HSP90AB2PQ58FF8 381 aa25.94■■□□□ 1.74
SPOCK3-219ENST00000511905 BMP2KLQ5H9B9 411 aa25.93■■□□□ 1.74
SPOCK3-219ENST00000511905 PTPRCP08575 1304 aa25.92■■□□□ 1.74
SPOCK3-219ENST00000511905 MAP3K19Q56UN5 1328 aa25.92■■□□□ 1.74
SPOCK3-219ENST00000511905 HTATSF1O43719 755 aaKnown RBP25.92■■□□□ 1.74
SPOCK3-219ENST00000511905 EIF5BO60841 1220 aaKnown RBP25.91■■□□□ 1.74
SPOCK3-219ENST00000511905 C22orf23Q9BZE7 217 aa25.91■■□□□ 1.74
SPOCK3-219ENST00000511905 PIK3C2AO00443 1686 aa25.9■■□□□ 1.74
SPOCK3-219ENST00000511905 NGDNQ8NEJ9 315 aaKnown RBP25.9■■□□□ 1.74
SPOCK3-219ENST00000511905 IGSF1Q8N6C5 1336 aa25.9■■□□□ 1.74
SPOCK3-219ENST00000511905 DCTN1Q14203 1278 aa25.88■■□□□ 1.73
SPOCK3-219ENST00000511905 ELL2O00472 640 aaPredicted RBP25.88■■□□□ 1.73
SPOCK3-219ENST00000511905 GAS2L2Q8NHY3 880 aa25.87■■□□□ 1.73
SPOCK3-219ENST00000511905 RGS12O14924 1447 aa25.86■■□□□ 1.73
SPOCK3-219ENST00000511905 RBM25P49756 843 aaKnown RBP25.86■■□□□ 1.73
SPOCK3-219ENST00000511905 BCL11AQ9H165 835 aa25.86■■□□□ 1.73
SPOCK3-219ENST00000511905 ANTXR1Q9H6X2 564 aa25.86■■□□□ 1.73
SPOCK3-219ENST00000511905 SOS1Q07889 1333 aaPredicted RBP25.86■■□□□ 1.73
SPOCK3-219ENST00000511905 CEP170BQ9Y4F5 1589 aaPredicted RBP25.86■■□□□ 1.73
SPOCK3-219ENST00000511905 SIRT2Q8IXJ6 389 aa25.85■■□□□ 1.73
SPOCK3-219ENST00000511905 TBC1D2Q9BYX2 928 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms