RNA–Protein interactions for RNA: ENST00000511896.5

APBB3-219, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,032 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-219ENST00000511896 MARF1Q9Y4F3 1742 aaKnown RBP24.83■■□□□ 1.57
APBB3-219ENST00000511896 FLT4P35916 1363 aa24.83■■□□□ 1.57
APBB3-219ENST00000511896 FANCIQ9NVI1 1328 aa24.83■■□□□ 1.57
APBB3-219ENST00000511896 C19orf44Q9H6X5 657 aa24.83■■□□□ 1.56
APBB3-219ENST00000511896 PSME1Q06323 249 aa24.82■■□□□ 1.56
APBB3-219ENST00000511896 ORAI2Q96SN7 254 aa24.82■■□□□ 1.56
APBB3-219ENST00000511896 RARSP54136 660 aaKnown RBP24.81■■□□□ 1.56
APBB3-219ENST00000511896 TSR2Q969E8 191 aaKnown RBP24.81■■□□□ 1.56
APBB3-219ENST00000511896 SULT6B1Q6IMI4 303 aa24.81■■□□□ 1.56
APBB3-219ENST00000511896 AMPHP49418 695 aa24.8■■□□□ 1.56
APBB3-219ENST00000511896 AEBP1Q8IUX7 1158 aa24.8■■□□□ 1.56
APBB3-219ENST00000511896 RGPD1P0DJD0 1748 aa24.79■■□□□ 1.56
APBB3-219ENST00000511896 CT47B1P0C2W7 299 aaPredicted RBP24.78■■□□□ 1.56
APBB3-219ENST00000511896 KIF24Q5T7B8 1368 aa24.77■■□□□ 1.56
APBB3-219ENST00000511896 FOXO3O43524 673 aa24.77■■□□□ 1.56
APBB3-219ENST00000511896 TMEM94Q12767 1356 aa24.77■■□□□ 1.56
APBB3-219ENST00000511896 STRCP1A6NGW2 1772 aa24.77■■□□□ 1.56
APBB3-219ENST00000511896 EXOSC9Q06265 439 aaKnown RBP24.76■■□□□ 1.55
APBB3-219ENST00000511896 C1orf167Q5SNV9 1468 aa24.75■■□□□ 1.55
APBB3-219ENST00000511896 ARHGEF10O15013 1369 aa24.74■■□□□ 1.55
APBB3-219ENST00000511896 LMTK3Q96Q04 1460 aa24.74■■□□□ 1.55
APBB3-219ENST00000511896 HOXC9P31274 260 aa24.74■■□□□ 1.55
APBB3-219ENST00000511896 CALD1Q05682 793 aaKnown RBP24.74■■□□□ 1.55
APBB3-219ENST00000511896 LMOD3Q0VAK6 560 aa24.74■■□□□ 1.55
APBB3-219ENST00000511896 PDE3AQ14432 1141 aa24.74■■□□□ 1.55
APBB3-219ENST00000511896 NCOA3Q9Y6Q9 1424 aa24.74■■□□□ 1.55
APBB3-219ENST00000511896 DLG5Q8TDM6 1919 aa24.73■■□□□ 1.55
APBB3-219ENST00000511896 THUMPD2Q9BTF0 503 aaKnown RBP24.73■■□□□ 1.55
APBB3-219ENST00000511896 ATF3P18847 181 aa24.71■■□□□ 1.55
APBB3-219ENST00000511896 XPCQ01831 940 aaPredicted RBP24.71■■□□□ 1.55
APBB3-219ENST00000511896 EYA1Q99502 592 aa24.71■■□□□ 1.55
APBB3-219ENST00000511896 BCL2L13Q9BXK5 485 aa24.71■■□□□ 1.55
APBB3-219ENST00000511896 KDRP35968 1356 aa24.7■■□□□ 1.54
APBB3-219ENST00000511896 IGSF1Q8N6C5 1336 aa24.7■■□□□ 1.54
APBB3-219ENST00000511896 CANXP27824 592 aaKnown RBP24.7■■□□□ 1.54
APBB3-219ENST00000511896 FRAT1Q92837 279 aaPredicted RBP24.7■■□□□ 1.54
APBB3-219ENST00000511896 DCCP43146 1447 aa24.7■■□□□ 1.54
APBB3-219ENST00000511896 KCNH5Q8NCM2 988 aa24.68■■□□□ 1.54
APBB3-219ENST00000511896 IFT57Q9NWB7 429 aa24.68■■□□□ 1.54
APBB3-219ENST00000511896 NFAT5O94916 1531 aa24.68■■□□□ 1.54
APBB3-219ENST00000511896 FAM83GA6ND36 823 aa24.68■■□□□ 1.54
APBB3-219ENST00000511896 ZNF853P0CG23 659 aa24.68■■□□□ 1.54
APBB3-219ENST00000511896 GNAI1P63096 354 aa24.68■■□□□ 1.54
APBB3-219ENST00000511896 LAS1LQ9Y4W2 734 aaKnown RBP24.68■■□□□ 1.54
APBB3-219ENST00000511896 MST1RQ04912 1400 aa24.67■■□□□ 1.54
APBB3-219ENST00000511896 RTL1A6NKG5 1358 aa24.67■■□□□ 1.54
APBB3-219ENST00000511896 KIF1AQ12756 1690 aa24.67■■□□□ 1.54
APBB3-219ENST00000511896 KRT28Q7Z3Y7 464 aa24.67■■□□□ 1.54
APBB3-219ENST00000511896 STRCQ7RTU9 1775 aa24.66■■□□□ 1.54
APBB3-219ENST00000511896 PANK1Q8TE04 598 aa24.65■■□□□ 1.54
APBB3-219ENST00000511896 CFAP44Q96MT7 982 aa24.65■■□□□ 1.54
APBB3-219ENST00000511896 LTN1O94822 1766 aa24.65■■□□□ 1.54
APBB3-219ENST00000511896 DCTN1Q14203 1278 aa24.64■■□□□ 1.54
APBB3-219ENST00000511896 CADPS2Q86UW7 1296 aa24.64■■□□□ 1.53
APBB3-219ENST00000511896 SSH1Q8WYL5 1049 aa24.64■■□□□ 1.53
APBB3-219ENST00000511896 IP6K1Q92551 441 aa24.64■■□□□ 1.53
APBB3-219ENST00000511896 TRPM3Q9HCF6 1732 aaPredicted RBP24.64■■□□□ 1.53
APBB3-219ENST00000511896 SMC4Q9NTJ3 1288 aa24.63■■□□□ 1.53
APBB3-219ENST00000511896 MBIPQ9NS73 344 aa24.62■■□□□ 1.53
APBB3-219ENST00000511896 GCP02774 474 aa24.62■■□□□ 1.53
APBB3-219ENST00000511896 LMOD2Q6P5Q4 547 aa24.61■■□□□ 1.53
APBB3-219ENST00000511896 COG6Q9Y2V7 657 aa24.61■■□□□ 1.53
APBB3-219ENST00000511896 RLBP1P12271 317 aa24.61■■□□□ 1.53
APBB3-219ENST00000511896 MTHFSDQ2M296 383 aaKnown RBP24.61■■□□□ 1.53
APBB3-219ENST00000511896 LTV1Q96GA3 475 aaPredicted RBP24.61■■□□□ 1.53
APBB3-219ENST00000511896 ZNF428Q96B54 188 aa24.6■■□□□ 1.53
APBB3-219ENST00000511896 TNNQ9UQP3 1299 aa24.6■■□□□ 1.53
APBB3-219ENST00000511896 MSH6P52701 1360 aa24.6■■□□□ 1.53
APBB3-219ENST00000511896 SLIT3O75094 1523 aa24.59■■□□□ 1.53
APBB3-219ENST00000511896 ZKSCAN2Q63HK3 967 aa24.59■■□□□ 1.53
APBB3-219ENST00000511896 USP19O94966 1318 aa24.59■■□□□ 1.53
APBB3-219ENST00000511896 PHRF1Q9P1Y6 1649 aaKnown RBP24.58■■□□□ 1.53
APBB3-219ENST00000511896 ALDH1L2Q3SY69 923 aa24.58■■□□□ 1.53
APBB3-219ENST00000511896 KDM2BQ8NHM5 1336 aa24.58■■□□□ 1.53
APBB3-219ENST00000511896 MCM10Q7L590 875 aa24.57■■□□□ 1.52
APBB3-219ENST00000511896 ARHGEF25Q86VW2 580 aa24.57■■□□□ 1.52
APBB3-219ENST00000511896 CLUAP1Q96AJ1 413 aa24.57■■□□□ 1.52
APBB3-219ENST00000511896 RBM19Q9Y4C8 960 aaKnown RBP24.57■■□□□ 1.52
APBB3-219ENST00000511896 VAMP4O75379 141 aa24.56■■□□□ 1.52
APBB3-219ENST00000511896 TSPYL6Q8N831 410 aa24.56■■□□□ 1.52
APBB3-219ENST00000511896 GAS2L2Q8NHY3 880 aa24.56■■□□□ 1.52
APBB3-219ENST00000511896 XIRP1Q702N8 1843 aaKnown RBP24.55■■□□□ 1.52
APBB3-219ENST00000511896 CENPQQ7L2Z9 268 aaPredicted RBP24.54■■□□□ 1.52
APBB3-219ENST00000511896 DDX17Q92841 729 aaKnown RBP24.54■■□□□ 1.52
APBB3-219ENST00000511896 ZBTB7CA1YPR0 619 aa24.54■■□□□ 1.52
APBB3-219ENST00000511896 CHL1O00533 1208 aa24.54■■□□□ 1.52
APBB3-219ENST00000511896 PLEKHG5O94827 1062 aa24.54■■□□□ 1.52
APBB3-219ENST00000511896 MS4A1P11836 297 aa24.54■■□□□ 1.52
APBB3-219ENST00000511896 TRIM27P14373 513 aa24.54■■□□□ 1.52
APBB3-219ENST00000511896 DZIP1LQ8IYY4 767 aaKnown RBP24.54■■□□□ 1.52
APBB3-219ENST00000511896 ALS2Q96Q42 1657 aa24.53■■□□□ 1.52
APBB3-219ENST00000511896 NPHP3Q7Z494 1330 aa24.53■■□□□ 1.52
APBB3-219ENST00000511896 KIF16BQ96L93 1317 aa24.53■■□□□ 1.52
APBB3-219ENST00000511896 BRPF1P55201 1214 aaPredicted RBP24.53■■□□□ 1.52
APBB3-219ENST00000511896 AAMPQ13685 434 aa24.53■■□□□ 1.52
APBB3-219ENST00000511896 ATF7IPQ6VMQ6 1270 aa24.53■■□□□ 1.52
APBB3-219ENST00000511896 NOB1Q9ULX3 412 aaKnown RBP24.53■■□□□ 1.52
APBB3-219ENST00000511896 ZNF335Q9H4Z2 1342 aaPredicted RBP24.53■■□□□ 1.52
APBB3-219ENST00000511896 C8orf58Q8NAV2 365 aa24.52■■□□□ 1.52
APBB3-219ENST00000511896 ELL2O00472 640 aaPredicted RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms