RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 RPGRIP1LQ68CZ1 1315 aa6.9□□□□□ -1.3
USP38-203ENST00000511739 ERC1Q8IUD2 1116 aa6.9□□□□□ -1.3
USP38-203ENST00000511739 CCDC158Q5M9N0 1113 aa6.9□□□□□ -1.3
USP38-203ENST00000511739 MAP7D2Q96T17 732 aa6.9□□□□□ -1.3
USP38-203ENST00000511739 PSMA5P28066 241 aa6.9□□□□□ -1.31
USP38-203ENST00000511739 GNAI1P63096 354 aa6.9□□□□□ -1.31
USP38-203ENST00000511739 FILIP1LQ4L180 1135 aa6.9□□□□□ -1.31
USP38-203ENST00000511739 WDR78Q5VTH9 848 aa6.9□□□□□ -1.31
USP38-203ENST00000511739 MPHOSPH8Q99549 860 aa6.9□□□□□ -1.31
USP38-203ENST00000511739 NAT10Q9H0A0 1025 aaKnown RBP6.9□□□□□ -1.31
USP38-203ENST00000511739 SHANK2Q9UPX8 1470 aa6.9□□□□□ -1.31
USP38-203ENST00000511739 ZNF76P36508 570 aa6.9□□□□□ -1.31
USP38-203ENST00000511739 AFAP1Q8N556 730 aa6.9□□□□□ -1.31
USP38-203ENST00000511739 TSHZ2Q9NRE2 1034 aa6.9□□□□□ -1.31
USP38-203ENST00000511739 NUP160Q12769 1436 aa6.89□□□□□ -1.31
USP38-203ENST00000511739 HMOX1P09601 288 aa6.89□□□□□ -1.31
USP38-203ENST00000511739 CABP4P57796 275 aa6.89□□□□□ -1.31
USP38-203ENST00000511739 CLASRPQ8N2M8 674 aaKnown RBP6.89□□□□□ -1.31
USP38-203ENST00000511739 NACAP1Q9BZK3 213 aa6.89□□□□□ -1.31
USP38-203ENST00000511739 EIF4G3O43432 1585 aaKnown RBP6.89□□□□□ -1.31
USP38-203ENST00000511739 ERLIN2O94905 339 aa6.89□□□□□ -1.31
USP38-203ENST00000511739 INTS3Q68E01 1043 aaKnown RBP6.89□□□□□ -1.31
USP38-203ENST00000511739 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.89□□□□□ -1.31
USP38-203ENST00000511739 ARGLU1Q9NWB6 273 aaPredicted RBP6.89□□□□□ -1.31
USP38-203ENST00000511739 COG6Q9Y2V7 657 aa6.89□□□□□ -1.31
USP38-203ENST00000511739 NINLQ9Y2I6 1382 aa6.89□□□□□ -1.31
USP38-203ENST00000511739 ATP10BO94823 1461 aa6.89□□□□□ -1.31
USP38-203ENST00000511739 TARBP1Q13395 1621 aaKnown RBP6.89□□□□□ -1.31
USP38-203ENST00000511739 EZRP15311 586 aaKnown RBP6.89□□□□□ -1.31
USP38-203ENST00000511739 AAMPQ13685 434 aa6.89□□□□□ -1.31
USP38-203ENST00000511739 SMARCE1Q969G3 411 aa6.89□□□□□ -1.31
USP38-203ENST00000511739 ZNF771Q7L3S4 317 aaPredicted RBP6.88□□□□□ -1.31
USP38-203ENST00000511739 PTPRKQ15262 1439 aa6.88□□□□□ -1.31
USP38-203ENST00000511739 PIP4K2AP48426 406 aaPredicted RBP6.88□□□□□ -1.31
USP38-203ENST00000511739 FAM161AQ3B820 660 aa6.88□□□□□ -1.31
USP38-203ENST00000511739 CNTROBQ8N137 903 aa6.88□□□□□ -1.31
USP38-203ENST00000511739 STK11IPQ8N1F8 1099 aa6.88□□□□□ -1.31
USP38-203ENST00000511739 BRPF1P55201 1214 aaPredicted RBP6.88□□□□□ -1.31
USP38-203ENST00000511739 TXNDC2Q86VQ3 553 aa6.88□□□□□ -1.31
USP38-203ENST00000511739 CENPQQ7L2Z9 268 aaPredicted RBP6.88□□□□□ -1.31
USP38-203ENST00000511739 DZIP1LQ8IYY4 767 aaKnown RBP6.88□□□□□ -1.31
USP38-203ENST00000511739 RRP1P56182 461 aaKnown RBP6.88□□□□□ -1.31
USP38-203ENST00000511739 BICDL1Q6ZP65 573 aa6.88□□□□□ -1.31
USP38-203ENST00000511739 TANGO6Q9C0B7 1094 aa6.88□□□□□ -1.31
USP38-203ENST00000511739 LUC7LQ9NQ29 371 aaKnown RBP6.88□□□□□ -1.31
USP38-203ENST00000511739 SLC52A1Q9NWF4 448 aa6.88□□□□□ -1.31
USP38-203ENST00000511739 SMG6Q86US8 1419 aaKnown RBP6.87□□□□□ -1.31
USP38-203ENST00000511739 ERCC4Q92889 916 aaPredicted RBP6.87□□□□□ -1.31
USP38-203ENST00000511739 BMP2KQ9NSY1 1161 aaPredicted RBP6.87□□□□□ -1.31
USP38-203ENST00000511739 ZNHIT6Q9NWK9 470 aaKnown RBP6.87□□□□□ -1.31
USP38-203ENST00000511739 DNMT1P26358 1616 aaKnown RBP6.87□□□□□ -1.31
USP38-203ENST00000511739 APAF1O14727 1248 aa6.87□□□□□ -1.31
USP38-203ENST00000511739 SSBP05455 408 aaKnown RBP eCLIP6.87□□□□□ -1.31
USP38-203ENST00000511739 CCDC181Q5TID7 509 aa6.87□□□□□ -1.31
USP38-203ENST00000511739 PPP4R3AQ6IN85 833 aa6.87□□□□□ -1.31
USP38-203ENST00000511739 GAS2L2Q8NHY3 880 aa6.87□□□□□ -1.31
USP38-203ENST00000511739 DRC1Q96MC2 740 aa6.87□□□□□ -1.31
USP38-203ENST00000511739 PRDM11Q9NQV5 511 aa6.87□□□□□ -1.31
USP38-203ENST00000511739 IFT57Q9NWB7 429 aa6.87□□□□□ -1.31
USP38-203ENST00000511739 CCDC30Q5VVM6 783 aa6.87□□□□□ -1.31
USP38-203ENST00000511739 ERBINQ96RT1 1412 aa6.87□□□□□ -1.31
USP38-203ENST00000511739 STIM1Q13586 685 aa6.87□□□□□ -1.31
USP38-203ENST00000511739 TRIM22Q8IYM9 498 aa6.86□□□□□ -1.31
USP38-203ENST00000511739 SEPT11Q9NVA2 429 aaKnown RBP6.86□□□□□ -1.31
USP38-203ENST00000511739 DISP1Q96F81 1524 aa6.86□□□□□ -1.31
USP38-203ENST00000511739 SURF6O75683 361 aaKnown RBP6.86□□□□□ -1.31
USP38-203ENST00000511739 TNIP1Q15025 636 aa6.86□□□□□ -1.31
USP38-203ENST00000511739 DUOX2Q9NRD8 1548 aa6.86□□□□□ -1.31
USP38-203ENST00000511739 H0YHG0 523 aa6.86□□□□□ -1.31
USP38-203ENST00000511739 DEF6Q9H4E7 631 aa6.86□□□□□ -1.31
USP38-203ENST00000511739 SPG7Q9UQ90 795 aa6.86□□□□□ -1.31
USP38-203ENST00000511739 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.86□□□□□ -1.31
USP38-203ENST00000511739 ENOX2Q16206 610 aaKnown RBP6.86□□□□□ -1.31
USP38-203ENST00000511739 ADGRL2O95490 1459 aa6.85□□□□□ -1.31
USP38-203ENST00000511739 CCDC69A6NI79 296 aa6.85□□□□□ -1.31
USP38-203ENST00000511739 HIP1O00291 1037 aa6.85□□□□□ -1.31
USP38-203ENST00000511739 POTEJP0CG39 1038 aa6.85□□□□□ -1.31
USP38-203ENST00000511739 PLCH2O75038 1416 aa6.85□□□□□ -1.31
USP38-203ENST00000511739 GNAI3P08754 354 aa6.85□□□□□ -1.31
USP38-203ENST00000511739 CA8P35219 290 aa6.85□□□□□ -1.31
USP38-203ENST00000511739 SSR1P43307 286 aaKnown RBP6.85□□□□□ -1.31
USP38-203ENST00000511739 CCDC57Q2TAC2 916 aa6.85□□□□□ -1.31
USP38-203ENST00000511739 THEMISQ8N1K5 641 aaPredicted RBP6.85□□□□□ -1.31
USP38-203ENST00000511739 NUP133Q8WUM0 1156 aa6.85□□□□□ -1.31
USP38-203ENST00000511739 KINO60870 393 aaKnown RBP6.85□□□□□ -1.31
USP38-203ENST00000511739 USP5P45974 858 aa6.85□□□□□ -1.31
USP38-203ENST00000511739 CRACR2BQ8N4Y2 399 aaPredicted RBP6.85□□□□□ -1.31
USP38-203ENST00000511739 IPO9Q96P70 1041 aaKnown RBP6.85□□□□□ -1.31
USP38-203ENST00000511739 HMGN5P82970 282 aaKnown RBP6.85□□□□□ -1.31
USP38-203ENST00000511739 ZSCAN25Q6NSZ9 544 aa6.85□□□□□ -1.31
USP38-203ENST00000511739 PNISRQ8TF01 805 aaKnown RBP6.85□□□□□ -1.31
USP38-203ENST00000511739 RAI14Q9P0K7 980 aa6.85□□□□□ -1.31
USP38-203ENST00000511739 NUCB2P80303 420 aa6.84□□□□□ -1.31
USP38-203ENST00000511739 GRM1Q13255 1194 aa6.84□□□□□ -1.31
USP38-203ENST00000511739 GRIPAP1Q4V328 841 aa6.84□□□□□ -1.31
USP38-203ENST00000511739 PLCD3Q8N3E9 789 aa6.84□□□□□ -1.31
USP38-203ENST00000511739 GGNBP2Q9H3C7 697 aa6.84□□□□□ -1.31
USP38-203ENST00000511739 ARHGEF12Q9NZN5 1544 aa6.84□□□□□ -1.31
USP38-203ENST00000511739 STK38Q15208 465 aa6.84□□□□□ -1.31
USP38-203ENST00000511739 NOM1Q5C9Z4 860 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms