RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 DHX9Q08211 1270 aaKnown RBP6.82□□□□□ -1.32
CHD1-207ENST00000511628 CCDC116Q8IYX3 515 aa6.82□□□□□ -1.32
CHD1-207ENST00000511628 TRIM34Q9BYJ4 488 aa6.82□□□□□ -1.32
CHD1-207ENST00000511628 SNRKQ9NRH2 765 aa6.82□□□□□ -1.32
CHD1-207ENST00000511628 EMILIN1Q9Y6C2 1016 aa6.82□□□□□ -1.32
CHD1-207ENST00000511628 POTECB2RU33 542 aa6.81□□□□□ -1.32
CHD1-207ENST00000511628 NR3C2P08235 984 aa6.81□□□□□ -1.32
CHD1-207ENST00000511628 TIMP2P16035 220 aa6.81□□□□□ -1.32
CHD1-207ENST00000511628 GRM5P41594 1212 aa6.81□□□□□ -1.32
CHD1-207ENST00000511628 ZNF592Q92610 1267 aa6.81□□□□□ -1.32
CHD1-207ENST00000511628 MTMR14Q8NCE2 650 aa6.8□□□□□ -1.32
CHD1-207ENST00000511628 TRIM52Q96A61 297 aa6.8□□□□□ -1.32
CHD1-207ENST00000511628 ITPKCQ96DU7 683 aa6.8□□□□□ -1.32
CHD1-207ENST00000511628 GJD4Q96KN9 370 aaPredicted RBP6.8□□□□□ -1.32
CHD1-207ENST00000511628 ZFAND3Q9H8U3 227 aa6.8□□□□□ -1.32
CHD1-207ENST00000511628 C6orf118Q5T5N4 469 aa6.79□□□□□ -1.32
CHD1-207ENST00000511628 MRPL14Q6P1L8 145 aaKnown RBP6.79□□□□□ -1.32
CHD1-207ENST00000511628 FBXO45P0C2W1 286 aa6.78□□□□□ -1.32
CHD1-207ENST00000511628 BMP2P12643 396 aa6.78□□□□□ -1.32
CHD1-207ENST00000511628 NR1H3Q13133 447 aa6.78□□□□□ -1.32
CHD1-207ENST00000511628 PPP1R26Q5T8A7 1209 aaPredicted RBP6.78□□□□□ -1.32
CHD1-207ENST00000511628 TRIM47Q96LD4 638 aa6.78□□□□□ -1.32
CHD1-207ENST00000511628 PURBQ96QR8 312 aaKnown RBP6.78□□□□□ -1.32
CHD1-207ENST00000511628 ESF1Q9H501 851 aaKnown RBP6.78□□□□□ -1.32
CHD1-207ENST00000511628 SOCS7O14512 581 aa6.77□□□□□ -1.33
CHD1-207ENST00000511628 TRIM46Q7Z4K8 759 aa6.77□□□□□ -1.33
CHD1-207ENST00000511628 SNRPBP14678 240 aaKnown RBP6.76□□□□□ -1.33
CHD1-207ENST00000511628 ABL2P42684 1182 aa6.76□□□□□ -1.33
CHD1-207ENST00000511628 INTS6LQ5JSJ4 861 aaKnown RBP6.76□□□□□ -1.33
CHD1-207ENST00000511628 ZFP42Q96MM3 310 aa6.76□□□□□ -1.33
CHD1-207ENST00000511628 OCSTAMPQ9BR26 566 aa6.76□□□□□ -1.33
CHD1-207ENST00000511628 TBC1D2BQ9UPU7 963 aa6.76□□□□□ -1.33
CHD1-207ENST00000511628 MAN1A2O60476 641 aa6.75□□□□□ -1.33
CHD1-207ENST00000511628 MCCD1P59942 119 aaPredicted RBP6.75□□□□□ -1.33
CHD1-207ENST00000511628 RNF20Q5VTR2 975 aa6.75□□□□□ -1.33
CHD1-207ENST00000511628 WWC1Q8IX03 1113 aa6.75□□□□□ -1.33
CHD1-207ENST00000511628 ZNF775Q96BV0 537 aaPredicted RBP6.75□□□□□ -1.33
CHD1-207ENST00000511628 TSEN34Q9BSV6 310 aaKnown RBP6.75□□□□□ -1.33
CHD1-207ENST00000511628 KLF16Q9BXK1 252 aaPredicted RBP6.75□□□□□ -1.33
CHD1-207ENST00000511628 RAD21O60216 631 aa6.74□□□□□ -1.33
CHD1-207ENST00000511628 EIF4G2P78344 907 aaKnown RBP eCLIP6.74□□□□□ -1.33
CHD1-207ENST00000511628 LINC00528Q8N1L1 170 aa6.74□□□□□ -1.33
CHD1-207ENST00000511628 MEIOBQ8N635 442 aa6.74□□□□□ -1.33
CHD1-207ENST00000511628 ERVH48-1M5A8F1 160 aa6.73□□□□□ -1.33
CHD1-207ENST00000511628 CBLBQ13191 982 aa6.73□□□□□ -1.33
CHD1-207ENST00000511628 TMEM132AQ24JP5 1023 aa6.73□□□□□ -1.33
CHD1-207ENST00000511628 SEPT12Q8IYM1 358 aa6.73□□□□□ -1.33
CHD1-207ENST00000511628 GDPD2Q9HCC8 539 aa6.73□□□□□ -1.33
CHD1-207ENST00000511628 TMPRSS4Q9NRS4 437 aa6.73□□□□□ -1.33
CHD1-207ENST00000511628 GIGYF1O75420 1035 aaPredicted RBP6.72□□□□□ -1.33
CHD1-207ENST00000511628 RELBQ01201 579 aa6.72□□□□□ -1.33
CHD1-207ENST00000511628 MCM6Q14566 821 aa6.71□□□□□ -1.34
CHD1-207ENST00000511628 CCDC125Q86Z20 511 aa6.71□□□□□ -1.34
CHD1-207ENST00000511628 ZNF784Q8NCA9 323 aaPredicted RBP6.71□□□□□ -1.34
CHD1-207ENST00000511628 CYLDQ9NQC7 956 aa6.71□□□□□ -1.34
CHD1-207ENST00000511628 UBTFP17480 764 aaKnown RBP6.7□□□□□ -1.34
CHD1-207ENST00000511628 FLIIQ13045 1269 aa6.7□□□□□ -1.34
CHD1-207ENST00000511628 WASHC4Q2M389 1173 aa6.7□□□□□ -1.34
CHD1-207ENST00000511628 SLC16A10Q8TF71 515 aa6.7□□□□□ -1.34
CHD1-207ENST00000511628 AGBL1Q96MI9 1066 aa6.7□□□□□ -1.34
CHD1-207ENST00000511628 PCDHB11Q9Y5F2 797 aa6.7□□□□□ -1.34
CHD1-207ENST00000511628 TTLL8A6PVC2 850 aa6.69□□□□□ -1.34
CHD1-207ENST00000511628 ESPNB1AK53 854 aa6.69□□□□□ -1.34
CHD1-207ENST00000511628 VAC14Q08AM6 782 aa6.69□□□□□ -1.34
CHD1-207ENST00000511628 SLFNL1Q499Z3 407 aa6.69□□□□□ -1.34
CHD1-207ENST00000511628 POLMQ9NP87 494 aaPredicted RBP6.69□□□□□ -1.34
CHD1-207ENST00000511628 FIGNL2A6NMB9 653 aa6.68□□□□□ -1.34
CHD1-207ENST00000511628 SOBPA7XYQ1 873 aa6.68□□□□□ -1.34
CHD1-207ENST00000511628 WFS1O76024 890 aa6.68□□□□□ -1.34
CHD1-207ENST00000511628 MYCP01106 439 aaPredicted RBP6.68□□□□□ -1.34
CHD1-207ENST00000511628 SEMA3FQ13275 785 aa6.68□□□□□ -1.34
CHD1-207ENST00000511628 Q6ZVU0 165 aa6.68□□□□□ -1.34
CHD1-207ENST00000511628 ZNF395Q9H8N7 513 aaPredicted RBP6.68□□□□□ -1.34
CHD1-207ENST00000511628 TERTO14746 1132 aaKnown RBP6.67□□□□□ -1.34
CHD1-207ENST00000511628 ADH1AP07327 375 aa6.67□□□□□ -1.34
CHD1-207ENST00000511628 INSM2Q96T92 566 aaPredicted RBP6.67□□□□□ -1.34
CHD1-207ENST00000511628 NXF1Q9UBU9 619 aaKnown RBP6.67□□□□□ -1.34
CHD1-207ENST00000511628 GTF3C3Q9Y5Q9 886 aa6.67□□□□□ -1.34
CHD1-207ENST00000511628 ATP5J2-PTCD1G3V325 749 aa6.66□□□□□ -1.34
CHD1-207ENST00000511628 MEN1O00255 615 aa6.66□□□□□ -1.34
CHD1-207ENST00000511628 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.66□□□□□ -1.34
CHD1-207ENST00000511628 CC2D2BQ6DHV5 1058 aa6.66□□□□□ -1.34
CHD1-207ENST00000511628 TREML4Q6UXN2 200 aa6.66□□□□□ -1.34
CHD1-207ENST00000511628 RNF135Q8IUD6 432 aa6.66□□□□□ -1.34
CHD1-207ENST00000511628 CEP126Q9P2H0 1117 aa6.66□□□□□ -1.34
CHD1-207ENST00000511628 SPINT1O43278 529 aa6.65□□□□□ -1.34
CHD1-207ENST00000511628 GPR37L1O60883 481 aa6.65□□□□□ -1.34
CHD1-207ENST00000511628 PTGIRP43119 386 aa6.65□□□□□ -1.34
CHD1-207ENST00000511628 IRF5Q13568 498 aa6.65□□□□□ -1.34
CHD1-207ENST00000511628 CYP2U1Q7Z449 544 aa6.65□□□□□ -1.34
CHD1-207ENST00000511628 NLRP3Q96P20 1036 aa6.65□□□□□ -1.34
CHD1-207ENST00000511628 COG6Q9Y2V7 657 aa6.65□□□□□ -1.34
CHD1-207ENST00000511628 SOS2Q07890 1332 aaPredicted RBP6.65□□□□□ -1.35
CHD1-207ENST00000511628 LILRA1O75019 489 aa6.64□□□□□ -1.35
CHD1-207ENST00000511628 ADD1P35611 737 aaKnown RBP6.64□□□□□ -1.35
CHD1-207ENST00000511628 SOX11P35716 441 aa6.64□□□□□ -1.35
CHD1-207ENST00000511628 VEGFBP49765 207 aa6.64□□□□□ -1.35
CHD1-207ENST00000511628 TIMELESSQ9UNS1 1208 aa6.64□□□□□ -1.35
CHD1-207ENST00000511628 DOLKQ9UPQ8 538 aa6.64□□□□□ -1.35
CHD1-207ENST00000511628 CTSOP43234 321 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms