RNA–Protein interactions for RNA: ENST00000511307.5

SH3TC2-209, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 2

Gene SH3TC2, Length 3,276 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-209ENST00000511307 NME9Q86XW9 330 aa13.04□□□□□ -0.32
SH3TC2-209ENST00000511307 CEP170BQ9Y4F5 1589 aaPredicted RBP13.04□□□□□ -0.32
SH3TC2-209ENST00000511307 FAM83GA6ND36 823 aa13.04□□□□□ -0.32
SH3TC2-209ENST00000511307 SLC26A8Q96RN1 970 aa13.04□□□□□ -0.32
SH3TC2-209ENST00000511307 NUDT16Q96DE0 195 aaKnown RBP13.03□□□□□ -0.32
SH3TC2-209ENST00000511307 PIK3R4Q99570 1358 aa13.03□□□□□ -0.32
SH3TC2-209ENST00000511307 PPIP5K1Q6PFW1 1433 aa13.03□□□□□ -0.32
SH3TC2-209ENST00000511307 ZNF692Q9BU19 519 aaPredicted RBP13.03□□□□□ -0.32
SH3TC2-209ENST00000511307 USP35Q9P2H5 1018 aa13.03□□□□□ -0.32
SH3TC2-209ENST00000511307 ROBO2Q9HCK4 1378 aa13.02□□□□□ -0.32
SH3TC2-209ENST00000511307 ANKLE2Q86XL3 938 aa13.02□□□□□ -0.32
SH3TC2-209ENST00000511307 NECTIN2Q92692 538 aa13.02□□□□□ -0.32
SH3TC2-209ENST00000511307 CD163L1Q9NR16 1453 aa13.02□□□□□ -0.33
SH3TC2-209ENST00000511307 NUTM2GQ5VZR2 741 aa13.02□□□□□ -0.33
SH3TC2-209ENST00000511307 ATF7IPQ6VMQ6 1270 aa13.02□□□□□ -0.33
SH3TC2-209ENST00000511307 PHACTR3Q96KR7 559 aa13.02□□□□□ -0.33
SH3TC2-209ENST00000511307 AMOTL2Q9Y2J4 779 aa13.02□□□□□ -0.33
SH3TC2-209ENST00000511307 PTCH1Q13635 1447 aa13.01□□□□□ -0.33
SH3TC2-209ENST00000511307 IPO8O15397 1037 aaKnown RBP13.01□□□□□ -0.33
SH3TC2-209ENST00000511307 EDC4Q6P2E9 1401 aaKnown RBP13.01□□□□□ -0.33
SH3TC2-209ENST00000511307 TPRNQ4KMQ1 711 aa13.01□□□□□ -0.33
SH3TC2-209ENST00000511307 ADGRB2O60241 1585 aa13.01□□□□□ -0.33
SH3TC2-209ENST00000511307 ADAMTSL3P82987 1691 aa13□□□□□ -0.33
SH3TC2-209ENST00000511307 SLC4A10Q6U841 1118 aa13□□□□□ -0.33
SH3TC2-209ENST00000511307 MIS18AQ9NYP9 233 aa13□□□□□ -0.33
SH3TC2-209ENST00000511307 LTV1Q96GA3 475 aaPredicted RBP13□□□□□ -0.33
SH3TC2-209ENST00000511307 DDX19BQ9UMR2 479 aa13□□□□□ -0.33
SH3TC2-209ENST00000511307 TSPYL6Q8N831 410 aa13□□□□□ -0.33
SH3TC2-209ENST00000511307 C22orf23Q9BZE7 217 aa12.99□□□□□ -0.33
SH3TC2-209ENST00000511307 TRIM35Q9UPQ4 493 aa12.99□□□□□ -0.33
SH3TC2-209ENST00000511307 CPSF1Q10570 1443 aaKnown RBP12.99□□□□□ -0.33
SH3TC2-209ENST00000511307 COG3Q96JB2 828 aa12.99□□□□□ -0.33
SH3TC2-209ENST00000511307 PNNQ9H307 717 aaKnown RBP12.98□□□□□ -0.33
SH3TC2-209ENST00000511307 ANKRD26Q9UPS8 1709 aa12.98□□□□□ -0.33
SH3TC2-209ENST00000511307 CDC42BPGQ6DT37 1551 aa12.98□□□□□ -0.33
SH3TC2-209ENST00000511307 HSP90AB1P08238 724 aaKnown RBP12.98□□□□□ -0.33
SH3TC2-209ENST00000511307 KRT24Q2M2I5 525 aa12.98□□□□□ -0.33
SH3TC2-209ENST00000511307 PTPRUQ92729 1446 aa12.97□□□□□ -0.33
SH3TC2-209ENST00000511307 ZNF142P52746 1687 aaPredicted RBP12.97□□□□□ -0.33
SH3TC2-209ENST00000511307 HSCBQ8IWL3 235 aa12.96□□□□□ -0.33
SH3TC2-209ENST00000511307 TBC1D2Q9BYX2 928 aa12.96□□□□□ -0.33
SH3TC2-209ENST00000511307 NCBP3Q53F19 620 aaKnown RBP12.96□□□□□ -0.33
SH3TC2-209ENST00000511307 ZNF428Q96B54 188 aa12.96□□□□□ -0.33
SH3TC2-209ENST00000511307 KIF20BQ96Q89 1820 aa12.96□□□□□ -0.33
SH3TC2-209ENST00000511307 SETD1BQ9UPS6 1966 aaKnown RBP12.96□□□□□ -0.33
SH3TC2-209ENST00000511307 POLKQ9UBT6 870 aa12.96□□□□□ -0.34
SH3TC2-209ENST00000511307 PLEKHG3A1L390 1219 aa12.95□□□□□ -0.34
SH3TC2-209ENST00000511307 SULT6B1Q6IMI4 303 aa12.95□□□□□ -0.34
SH3TC2-209ENST00000511307 MCM10Q7L590 875 aa12.95□□□□□ -0.34
SH3TC2-209ENST00000511307 RBM33Q96EV2 1170 aaKnown RBP12.95□□□□□ -0.34
SH3TC2-209ENST00000511307 TWISTNBQ3B726 338 aaPredicted RBP12.94□□□□□ -0.34
SH3TC2-209ENST00000511307 AEBP1Q8IUX7 1158 aa12.94□□□□□ -0.34
SH3TC2-209ENST00000511307 LMOD2Q6P5Q4 547 aa12.94□□□□□ -0.34
SH3TC2-209ENST00000511307 PRR36Q9H6K5 1346 aa12.93□□□□□ -0.34
SH3TC2-209ENST00000511307 SHPRHQ149N8 1683 aa12.93□□□□□ -0.34
SH3TC2-209ENST00000511307 ITSN1Q15811 1721 aa12.93□□□□□ -0.34
SH3TC2-209ENST00000511307 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.93□□□□□ -0.34
SH3TC2-209ENST00000511307 NCLP19338 710 aaKnown RBP12.93□□□□□ -0.34
SH3TC2-209ENST00000511307 XRN1Q8IZH2 1706 aaKnown RBP12.92□□□□□ -0.34
SH3TC2-209ENST00000511307 FOXD4L5Q5VV16 416 aaPredicted RBP12.92□□□□□ -0.34
SH3TC2-209ENST00000511307 NOL8Q76FK4 1167 aaKnown RBP12.92□□□□□ -0.34
SH3TC2-209ENST00000511307 FOXD4L4Q8WXT5 416 aaPredicted RBP12.92□□□□□ -0.34
SH3TC2-209ENST00000511307 KIF16BQ96L93 1317 aa12.92□□□□□ -0.34
SH3TC2-209ENST00000511307 AATKQ6ZMQ8 1374 aa12.92□□□□□ -0.34
SH3TC2-209ENST00000511307 ANKARQ7Z5J8 1434 aa12.92□□□□□ -0.34
SH3TC2-209ENST00000511307 C8orf58Q8NAV2 365 aa12.91□□□□□ -0.34
SH3TC2-209ENST00000511307 MBIPQ9NS73 344 aa12.91□□□□□ -0.34
SH3TC2-209ENST00000511307 FCHSD2O94868 740 aa12.91□□□□□ -0.34
SH3TC2-209ENST00000511307 NGDNQ8NEJ9 315 aaKnown RBP12.91□□□□□ -0.34
SH3TC2-209ENST00000511307 ACEP12821 1306 aa12.91□□□□□ -0.34
SH3TC2-209ENST00000511307 MON2Q7Z3U7 1717 aa12.91□□□□□ -0.34
SH3TC2-209ENST00000511307 USP19O94966 1318 aa12.91□□□□□ -0.34
SH3TC2-209ENST00000511307 KCNA6P17658 529 aa12.91□□□□□ -0.34
SH3TC2-209ENST00000511307 CCDC27Q2M243 656 aa12.91□□□□□ -0.34
SH3TC2-209ENST00000511307 PNPLA6Q8IY17 1366 aa12.91□□□□□ -0.34
SH3TC2-209ENST00000511307 PLEKHF1Q96S99 279 aa12.91□□□□□ -0.34
SH3TC2-209ENST00000511307 TTC21AQ8NDW8 1320 aa12.9□□□□□ -0.34
SH3TC2-209ENST00000511307 TBC1D32Q96NH3 1257 aa12.9□□□□□ -0.34
SH3TC2-209ENST00000511307 NFE2L2Q16236 605 aa12.9□□□□□ -0.34
SH3TC2-209ENST00000511307 RBM42Q9BTD8 480 aaKnown RBP12.9□□□□□ -0.34
SH3TC2-209ENST00000511307 NPHP4O75161 1426 aaPredicted RBP12.9□□□□□ -0.35
SH3TC2-209ENST00000511307 AKAP12Q02952 1782 aa12.89□□□□□ -0.35
SH3TC2-209ENST00000511307 TTC21BQ7Z4L5 1316 aa12.89□□□□□ -0.35
SH3TC2-209ENST00000511307 CHD1LQ86WJ1 897 aa12.89□□□□□ -0.35
SH3TC2-209ENST00000511307 TOPAZ1Q8N9V7 1692 aa12.89□□□□□ -0.35
SH3TC2-209ENST00000511307 SMARCA5O60264 1052 aaPredicted RBP12.89□□□□□ -0.35
SH3TC2-209ENST00000511307 GNAI1P63096 354 aa12.89□□□□□ -0.35
SH3TC2-209ENST00000511307 RTF1Q92541 710 aaKnown RBP12.89□□□□□ -0.35
SH3TC2-209ENST00000511307 COL3A1P02461 1466 aaPredicted RBP12.89□□□□□ -0.35
SH3TC2-209ENST00000511307 USP6P35125 1406 aa12.88□□□□□ -0.35
SH3TC2-209ENST00000511307 AMPHP49418 695 aa12.88□□□□□ -0.35
SH3TC2-209ENST00000511307 HSP90AB2PQ58FF8 381 aa12.88□□□□□ -0.35
SH3TC2-209ENST00000511307 C16orf71Q8IYS4 520 aaPredicted RBP12.87□□□□□ -0.35
SH3TC2-209ENST00000511307 IQSEC2Q5JU85 1478 aa12.87□□□□□ -0.35
SH3TC2-209ENST00000511307 F6X3S4 739 aa12.87□□□□□ -0.35
SH3TC2-209ENST00000511307 FOXD4L6Q3SYB3 417 aaPredicted RBP12.87□□□□□ -0.35
SH3TC2-209ENST00000511307 FOXD4L3Q6VB84 417 aaPredicted RBP12.87□□□□□ -0.35
SH3TC2-209ENST00000511307 RSPH6AQ9H0K4 717 aa12.87□□□□□ -0.35
SH3TC2-209ENST00000511307 CDK12Q9NYV4 1490 aaPredicted RBP12.87□□□□□ -0.35
SH3TC2-209ENST00000511307 ZBTB40Q9NUA8 1239 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms