RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 STK24Q9Y6E0 443 aa7.46□□□□□ -1.22
PROM1-211ENST00000511153 CD163L1Q9NR16 1453 aa7.45□□□□□ -1.22
PROM1-211ENST00000511153 CDCA8Q53HL2 280 aa7.45□□□□□ -1.22
PROM1-211ENST00000511153 CC2D1BQ5T0F9 858 aaKnown RBP7.45□□□□□ -1.22
PROM1-211ENST00000511153 GGNBP2Q9H3C7 697 aa7.45□□□□□ -1.22
PROM1-211ENST00000511153 NSD3Q9BZ95 1437 aa7.45□□□□□ -1.22
PROM1-211ENST00000511153 IQSEC2Q5JU85 1478 aa7.45□□□□□ -1.22
PROM1-211ENST00000511153 AKAP12Q02952 1782 aa7.44□□□□□ -1.22
PROM1-211ENST00000511153 PLEKHG3A1L390 1219 aa7.44□□□□□ -1.22
PROM1-211ENST00000511153 ZNF467Q7Z7K2 595 aaPredicted RBP7.44□□□□□ -1.22
PROM1-211ENST00000511153 NPHP3Q7Z494 1330 aa7.44□□□□□ -1.22
PROM1-211ENST00000511153 KIF1AQ12756 1690 aa7.44□□□□□ -1.22
PROM1-211ENST00000511153 ADAMTS2O95450 1211 aa7.43□□□□□ -1.22
PROM1-211ENST00000511153 USP6P35125 1406 aa7.43□□□□□ -1.22
PROM1-211ENST00000511153 PSEN1P49768 467 aa7.43□□□□□ -1.22
PROM1-211ENST00000511153 HAP1P54257 671 aaPredicted RBP7.43□□□□□ -1.22
PROM1-211ENST00000511153 NHSL1Q5SYE7 1610 aa7.43□□□□□ -1.22
PROM1-211ENST00000511153 ABTB2Q8N961 1025 aa7.43□□□□□ -1.22
PROM1-211ENST00000511153 ZNF579Q8NAF0 562 aaKnown RBP7.43□□□□□ -1.22
PROM1-211ENST00000511153 PXDNQ92626 1479 aa7.43□□□□□ -1.22
PROM1-211ENST00000511153 MS4A3Q96HJ5 214 aa7.43□□□□□ -1.22
PROM1-211ENST00000511153 TERF2IPQ9NYB0 399 aa7.43□□□□□ -1.22
PROM1-211ENST00000511153 TTC21BQ7Z4L5 1316 aa7.42□□□□□ -1.22
PROM1-211ENST00000511153 NLRP6P59044 892 aa7.42□□□□□ -1.22
PROM1-211ENST00000511153 MON2Q7Z3U7 1717 aa7.42□□□□□ -1.22
PROM1-211ENST00000511153 TRPM3Q9HCF6 1732 aaPredicted RBP7.42□□□□□ -1.22
PROM1-211ENST00000511153 COL16A1Q07092 1604 aaPredicted RBP7.42□□□□□ -1.22
PROM1-211ENST00000511153 POLR3AO14802 1390 aaPredicted RBP7.42□□□□□ -1.22
PROM1-211ENST00000511153 ANKRD36BQ8N2N9 1353 aa7.42□□□□□ -1.22
PROM1-211ENST00000511153 PDAP1Q13442 181 aaKnown RBP7.42□□□□□ -1.22
PROM1-211ENST00000511153 SGIP1Q9BQI5 828 aa7.42□□□□□ -1.22
PROM1-211ENST00000511153 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.42□□□□□ -1.22
PROM1-211ENST00000511153 CPSF1Q10570 1443 aaKnown RBP7.41□□□□□ -1.22
PROM1-211ENST00000511153 SOS2Q07890 1332 aaPredicted RBP7.41□□□□□ -1.22
PROM1-211ENST00000511153 SPATA31A3Q5VYP0 1347 aa7.41□□□□□ -1.22
PROM1-211ENST00000511153 ZC3H6P61129 1189 aaKnown RBP7.41□□□□□ -1.22
PROM1-211ENST00000511153 CHRNA2Q15822 529 aa7.41□□□□□ -1.22
PROM1-211ENST00000511153 PIK3C2AO00443 1686 aa7.41□□□□□ -1.22
PROM1-211ENST00000511153 AHDC1Q5TGY3 1603 aaPredicted RBP7.41□□□□□ -1.22
PROM1-211ENST00000511153 PPM1GO15355 546 aaPredicted RBP7.4□□□□□ -1.22
PROM1-211ENST00000511153 GALR2O43603 387 aaPredicted RBP7.4□□□□□ -1.22
PROM1-211ENST00000511153 KNSTRNQ9Y448 316 aa7.4□□□□□ -1.22
PROM1-211ENST00000511153 NRKQ7Z2Y5 1582 aa7.4□□□□□ -1.23
PROM1-211ENST00000511153 KIF20BQ96Q89 1820 aa7.4□□□□□ -1.23
PROM1-211ENST00000511153 TNS3Q68CZ2 1445 aa7.4□□□□□ -1.23
PROM1-211ENST00000511153 PNPLA6Q8IY17 1366 aa7.39□□□□□ -1.23
PROM1-211ENST00000511153 FYB1O15117 783 aa7.39□□□□□ -1.23
PROM1-211ENST00000511153 MEX3CQ5U5Q3 659 aaKnown RBP7.39□□□□□ -1.23
PROM1-211ENST00000511153 SPRYD3Q8NCJ5 442 aa7.39□□□□□ -1.23
PROM1-211ENST00000511153 LRRC59Q96AG4 307 aaKnown RBP7.39□□□□□ -1.23
PROM1-211ENST00000511153 TAOK2Q9UL54 1235 aa7.39□□□□□ -1.23
PROM1-211ENST00000511153 ALS2Q96Q42 1657 aa7.39□□□□□ -1.23
PROM1-211ENST00000511153 RRS1Q15050 365 aaKnown RBP7.38□□□□□ -1.23
PROM1-211ENST00000511153 LTV1Q96GA3 475 aaPredicted RBP7.38□□□□□ -1.23
PROM1-211ENST00000511153 COG3Q96JB2 828 aa7.38□□□□□ -1.23
PROM1-211ENST00000511153 C8orf37Q96NL8 207 aa7.38□□□□□ -1.23
PROM1-211ENST00000511153 PUS7Q96PZ0 661 aaKnown RBP7.38□□□□□ -1.23
PROM1-211ENST00000511153 EDC4Q6P2E9 1401 aaKnown RBP7.38□□□□□ -1.23
PROM1-211ENST00000511153 MED1Q15648 1581 aaPredicted RBP7.38□□□□□ -1.23
PROM1-211ENST00000511153 NINLQ9Y2I6 1382 aa7.38□□□□□ -1.23
PROM1-211ENST00000511153 MARF1Q9Y4F3 1742 aaKnown RBP7.38□□□□□ -1.23
PROM1-211ENST00000511153 CGNL1Q0VF96 1302 aa7.38□□□□□ -1.23
PROM1-211ENST00000511153 GTPBP6O43824 516 aaPredicted RBP7.37□□□□□ -1.23
PROM1-211ENST00000511153 MORC1Q86VD1 984 aa7.37□□□□□ -1.23
PROM1-211ENST00000511153 SSH2Q76I76 1423 aa7.37□□□□□ -1.23
PROM1-211ENST00000511153 SBNO1A3KN83 1393 aa7.37□□□□□ -1.23
PROM1-211ENST00000511153 JCADQ9P266 1359 aa7.37□□□□□ -1.23
PROM1-211ENST00000511153 LRP6O75581 1613 aa7.37□□□□□ -1.23
PROM1-211ENST00000511153 PER1O15534 1290 aaPredicted RBP7.37□□□□□ -1.23
PROM1-211ENST00000511153 PRKCSHP14314 528 aaPredicted RBP7.37□□□□□ -1.23
PROM1-211ENST00000511153 NLRP13Q86W25 1043 aa7.37□□□□□ -1.23
PROM1-211ENST00000511153 TSHZ2Q9NRE2 1034 aa7.37□□□□□ -1.23
PROM1-211ENST00000511153 TTC21AQ8NDW8 1320 aa7.36□□□□□ -1.23
PROM1-211ENST00000511153 ABCA3Q99758 1704 aa7.36□□□□□ -1.23
PROM1-211ENST00000511153 GCP02774 474 aa7.36□□□□□ -1.23
PROM1-211ENST00000511153 STRN4Q9NRL3 753 aa7.36□□□□□ -1.23
PROM1-211ENST00000511153 EMILIN1Q9Y6C2 1016 aa7.36□□□□□ -1.23
PROM1-211ENST00000511153 ARHGEF10O15013 1369 aa7.36□□□□□ -1.23
PROM1-211ENST00000511153 KIAA0232Q92628 1395 aa7.36□□□□□ -1.23
PROM1-211ENST00000511153 PHRF1Q9P1Y6 1649 aaKnown RBP7.36□□□□□ -1.23
PROM1-211ENST00000511153 SENP3-EIF4A1A0A087X0R7 540 aa7.35□□□□□ -1.23
PROM1-211ENST00000511153 FAM83GA6ND36 823 aa7.35□□□□□ -1.23
PROM1-211ENST00000511153 PRDM11Q9NQV5 511 aa7.35□□□□□ -1.23
PROM1-211ENST00000511153 SHPRHQ149N8 1683 aa7.35□□□□□ -1.23
PROM1-211ENST00000511153 RGPD5Q99666 1765 aa7.34□□□□□ -1.23
PROM1-211ENST00000511153 EFCAB3Q8N7B9 438 aa7.34□□□□□ -1.23
PROM1-211ENST00000511153 NGLY1Q96IV0 654 aa7.34□□□□□ -1.23
PROM1-211ENST00000511153 TMEM106CQ9BVX2 250 aa7.34□□□□□ -1.23
PROM1-211ENST00000511153 CCDC9Q9Y3X0 531 aaKnown RBP7.34□□□□□ -1.23
PROM1-211ENST00000511153 LTN1O94822 1766 aa7.34□□□□□ -1.23
PROM1-211ENST00000511153 MAP3K19Q56UN5 1328 aa7.34□□□□□ -1.23
PROM1-211ENST00000511153 OVOS2A0A0J9YW53 1432 aa7.34□□□□□ -1.23
PROM1-211ENST00000511153 OVOS2Q6IE36 1432 aa7.34□□□□□ -1.23
PROM1-211ENST00000511153 CRYBG1Q9Y4K1 1723 aa7.34□□□□□ -1.24
PROM1-211ENST00000511153 MAP2P11137 1827 aaKnown RBP7.34□□□□□ -1.24
PROM1-211ENST00000511153 AMPHP49418 695 aa7.33□□□□□ -1.24
PROM1-211ENST00000511153 DIEXFQ68CQ4 756 aaKnown RBP7.33□□□□□ -1.24
PROM1-211ENST00000511153 USP35Q9P2H5 1018 aa7.33□□□□□ -1.24
PROM1-211ENST00000511153 AXIN2Q9Y2T1 843 aa7.33□□□□□ -1.24
PROM1-211ENST00000511153 USP19O94966 1318 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms