RNA–Protein interactions for RNA: ENST00000511072.5

PRDM16-206, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-206ENST00000511072 MPNDQ8N594 471 aa17.14■□□□□ 0.33
PRDM16-206ENST00000511072 FYB1O15117 783 aa17.13■□□□□ 0.33
PRDM16-206ENST00000511072 RALYLQ86SE5 291 aaKnown RBP17.13■□□□□ 0.33
PRDM16-206ENST00000511072 PLCD3Q8N3E9 789 aa17.13■□□□□ 0.33
PRDM16-206ENST00000511072 FIBPO43427 364 aa17.13■□□□□ 0.33
PRDM16-206ENST00000511072 USHBP1Q8N6Y0 703 aa17.13■□□□□ 0.33
PRDM16-206ENST00000511072 CD109Q6YHK3 1445 aa17.13■□□□□ 0.33
PRDM16-206ENST00000511072 F6X3S4 739 aa17.13■□□□□ 0.33
PRDM16-206ENST00000511072 LRRCC1Q9C099 1032 aa17.12■□□□□ 0.33
PRDM16-206ENST00000511072 TRIM29Q14134 588 aa17.12■□□□□ 0.33
PRDM16-206ENST00000511072 MTMR7Q9Y216 660 aa17.12■□□□□ 0.33
PRDM16-206ENST00000511072 UNC13AQ9UPW8 1703 aa17.12■□□□□ 0.33
PRDM16-206ENST00000511072 CCAR2Q8N163 923 aaKnown RBP17.12■□□□□ 0.33
PRDM16-206ENST00000511072 CT47B1P0C2W7 299 aaPredicted RBP17.11■□□□□ 0.33
PRDM16-206ENST00000511072 ATP2B1P20020 1258 aa17.11■□□□□ 0.33
PRDM16-206ENST00000511072 TPD52L1Q16890 204 aaPredicted RBP17.11■□□□□ 0.33
PRDM16-206ENST00000511072 ZSCAN30Q86W11 494 aa17.11■□□□□ 0.33
PRDM16-206ENST00000511072 TBC1D2Q9BYX2 928 aa17.11■□□□□ 0.33
PRDM16-206ENST00000511072 SMARCA5O60264 1052 aaPredicted RBP17.11■□□□□ 0.33
PRDM16-206ENST00000511072 SEC24BO95487 1268 aa17.11■□□□□ 0.33
PRDM16-206ENST00000511072 CCDC85AQ96PX6 553 aaPredicted RBP17.11■□□□□ 0.33
PRDM16-206ENST00000511072 FOXO3O43524 673 aa17.1■□□□□ 0.33
PRDM16-206ENST00000511072 CCT4P50991 539 aaKnown RBP17.1■□□□□ 0.33
PRDM16-206ENST00000511072 RABEP1Q15276 862 aa17.1■□□□□ 0.33
PRDM16-206ENST00000511072 MAP3K1Q13233 1512 aa17.1■□□□□ 0.33
PRDM16-206ENST00000511072 DHX16O60231 1041 aaKnown RBP17.1■□□□□ 0.33
PRDM16-206ENST00000511072 TATP17735 454 aaPredicted RBP17.1■□□□□ 0.33
PRDM16-206ENST00000511072 ERBB4Q15303 1308 aa17.1■□□□□ 0.33
PRDM16-206ENST00000511072 TOM1L2Q6ZVM7 507 aa17.1■□□□□ 0.33
PRDM16-206ENST00000511072 CBX1P83916 185 aa17.1■□□□□ 0.33
PRDM16-206ENST00000511072 CEBPZQ03701 1054 aaKnown RBP17.1■□□□□ 0.33
PRDM16-206ENST00000511072 VGLL3A8MV65 326 aa17.09■□□□□ 0.33
PRDM16-206ENST00000511072 THOC2Q8NI27 1593 aaKnown RBP17.09■□□□□ 0.33
PRDM16-206ENST00000511072 FAM83GA6ND36 823 aa17.08■□□□□ 0.33
PRDM16-206ENST00000511072 TRIM27P14373 513 aa17.08■□□□□ 0.33
PRDM16-206ENST00000511072 ANKLE2Q86XL3 938 aa17.08■□□□□ 0.33
PRDM16-206ENST00000511072 UPF3BQ9BZI7 483 aaKnown RBP17.08■□□□□ 0.33
PRDM16-206ENST00000511072 PRDM11Q9NQV5 511 aa17.08■□□□□ 0.33
PRDM16-206ENST00000511072 STK3Q13188 491 aa17.08■□□□□ 0.32
PRDM16-206ENST00000511072 GPATCH8Q9UKJ3 1502 aaKnown RBP17.07■□□□□ 0.32
PRDM16-206ENST00000511072 ADGRL1O94910 1474 aa17.07■□□□□ 0.32
PRDM16-206ENST00000511072 ZNF771Q7L3S4 317 aaPredicted RBP17.07■□□□□ 0.32
PRDM16-206ENST00000511072 SDF4Q9BRK5 362 aa17.07■□□□□ 0.32
PRDM16-206ENST00000511072 CWC27Q6UX04 472 aaKnown RBP17.07■□□□□ 0.32
PRDM16-206ENST00000511072 CCDC73Q6ZRK6 1079 aa17.07■□□□□ 0.32
PRDM16-206ENST00000511072 NUTM1Q86Y26 1132 aa17.07■□□□□ 0.32
PRDM16-206ENST00000511072 CCDC173Q0VFZ6 552 aa17.06■□□□□ 0.32
PRDM16-206ENST00000511072 STK11IPQ8N1F8 1099 aa17.06■□□□□ 0.32
PRDM16-206ENST00000511072 NOS1P29475 1434 aa17.06■□□□□ 0.32
PRDM16-206ENST00000511072 BTBD11A6QL63 1104 aa17.06■□□□□ 0.32
PRDM16-206ENST00000511072 PTCD1O75127 700 aaKnown RBP17.06■□□□□ 0.32
PRDM16-206ENST00000511072 SASS6Q6UVJ0 657 aa17.06■□□□□ 0.32
PRDM16-206ENST00000511072 MTERF4Q7Z6M4 381 aaKnown RBP17.06■□□□□ 0.32
PRDM16-206ENST00000511072 LAMC3Q9Y6N6 1575 aa17.06■□□□□ 0.32
PRDM16-206ENST00000511072 CABP4P57796 275 aa17.06■□□□□ 0.32
PRDM16-206ENST00000511072 CHMP4CQ96CF2 233 aa17.06■□□□□ 0.32
PRDM16-206ENST00000511072 FMNL2Q96PY5 1086 aa17.05■□□□□ 0.32
PRDM16-206ENST00000511072 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.05■□□□□ 0.32
PRDM16-206ENST00000511072 K7ELQ4 463 aaPredicted RBP17.05■□□□□ 0.32
PRDM16-206ENST00000511072 SAMD1Q6SPF0 538 aaPredicted RBP17.05■□□□□ 0.32
PRDM16-206ENST00000511072 IGHDP01880 384 aa17.05■□□□□ 0.32
PRDM16-206ENST00000511072 AACSQ86V21 672 aa17.04■□□□□ 0.32
PRDM16-206ENST00000511072 NINLQ9Y2I6 1382 aa17.04■□□□□ 0.32
PRDM16-206ENST00000511072 TPM3P06753 285 aa17.04■□□□□ 0.32
PRDM16-206ENST00000511072 RRP12Q5JTH9 1297 aaKnown RBP17.04■□□□□ 0.32
PRDM16-206ENST00000511072 AMOTL2Q9Y2J4 779 aa17.04■□□□□ 0.32
PRDM16-206ENST00000511072 RPAP2Q8IXW5 612 aaPredicted RBP17.04■□□□□ 0.32
PRDM16-206ENST00000511072 C14orf93Q9H972 538 aaKnown RBP17.04■□□□□ 0.32
PRDM16-206ENST00000511072 WASLO00401 505 aaPredicted RBP17.03■□□□□ 0.32
PRDM16-206ENST00000511072 IGSF3O75054 1194 aa17.03■□□□□ 0.32
PRDM16-206ENST00000511072 PSMA5P28066 241 aa17.03■□□□□ 0.32
PRDM16-206ENST00000511072 ERICH2A1L162 156 aa17.03■□□□□ 0.32
PRDM16-206ENST00000511072 GNAT3A8MTJ3 354 aa17.03■□□□□ 0.32
PRDM16-206ENST00000511072 NOL10Q9BSC4 688 aaKnown RBP17.02■□□□□ 0.32
PRDM16-206ENST00000511072 MPRIPQ6WCQ1 1025 aa17.01■□□□□ 0.31
PRDM16-206ENST00000511072 SMAP1Q8IYB5 467 aaPredicted RBP17.01■□□□□ 0.31
PRDM16-206ENST00000511072 PRDM4Q9UKN5 801 aa17.01■□□□□ 0.31
PRDM16-206ENST00000511072 PEG3Q9GZU2 1588 aa17.01■□□□□ 0.31
PRDM16-206ENST00000511072 FKBP4Q02790 459 aaKnown RBP eCLIP17.01■□□□□ 0.31
PRDM16-206ENST00000511072 CNNM1Q9NRU3 951 aa17.01■□□□□ 0.31
PRDM16-206ENST00000511072 CGNQ9P2M7 1197 aaKnown RBP17.01■□□□□ 0.31
PRDM16-206ENST00000511072 OFD1O75665 1012 aa17.01■□□□□ 0.31
PRDM16-206ENST00000511072 PAXIP1Q6ZW49 1069 aaPredicted RBP17.01■□□□□ 0.31
PRDM16-206ENST00000511072 NOC3LQ8WTT2 800 aaKnown RBP17.01■□□□□ 0.31
PRDM16-206ENST00000511072 HOMER1Q86YM7 354 aa17■□□□□ 0.31
PRDM16-206ENST00000511072 FSD2A1L4K1 749 aa17■□□□□ 0.31
PRDM16-206ENST00000511072 CUL7Q14999 1698 aa17■□□□□ 0.31
PRDM16-206ENST00000511072 NKTRP30414 1462 aaKnown RBP17■□□□□ 0.31
PRDM16-206ENST00000511072 ANXA1P04083 346 aa17■□□□□ 0.31
PRDM16-206ENST00000511072 SAFBQ15424 915 aaKnown RBP eCLIP17■□□□□ 0.31
PRDM16-206ENST00000511072 TAF7Q15545 349 aaPredicted RBP17■□□□□ 0.31
PRDM16-206ENST00000511072 IFT57Q9NWB7 429 aa17■□□□□ 0.31
PRDM16-206ENST00000511072 NUTM2BA6NNL0 878 aaPredicted RBP16.99■□□□□ 0.31
PRDM16-206ENST00000511072 NUTM2EB1AL46 878 aaPredicted RBP16.99■□□□□ 0.31
PRDM16-206ENST00000511072 NUTM2AQ8IVF1 878 aaPredicted RBP16.99■□□□□ 0.31
PRDM16-206ENST00000511072 CYP46A1Q9Y6A2 500 aa16.99■□□□□ 0.31
PRDM16-206ENST00000511072 MCM2P49736 904 aa16.99■□□□□ 0.31
PRDM16-206ENST00000511072 TNNQ9UQP3 1299 aa16.99■□□□□ 0.31
PRDM16-206ENST00000511072 LRPPRCP42704 1394 aaKnown RBP16.99■□□□□ 0.31
PRDM16-206ENST00000511072 TSHZ3Q63HK5 1081 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms