RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 PLXNC1O60486 1568 aa15.95■□□□□ 0.14
LIN54-210ENST00000510877 AIMP1Q12904 312 aaKnown RBP15.95■□□□□ 0.14
LIN54-210ENST00000510877 INO80Q9ULG1 1556 aaPredicted RBP15.95■□□□□ 0.14
LIN54-210ENST00000510877 POTEAQ6S8J7 498 aa15.95■□□□□ 0.14
LIN54-210ENST00000510877 ZNF622Q969S3 477 aaKnown RBP eCLIP15.95■□□□□ 0.14
LIN54-210ENST00000510877 PIK3C2GO75747 1445 aa15.94■□□□□ 0.14
LIN54-210ENST00000510877 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.94■□□□□ 0.14
LIN54-210ENST00000510877 RICTORQ6R327 1708 aa15.94■□□□□ 0.14
LIN54-210ENST00000510877 TCERG1O14776 1098 aaKnown RBP15.94■□□□□ 0.14
LIN54-210ENST00000510877 PRKAR2BP31323 418 aa15.94■□□□□ 0.14
LIN54-210ENST00000510877 NSD3Q9BZ95 1437 aa15.94■□□□□ 0.14
LIN54-210ENST00000510877 HSP90AB2PQ58FF8 381 aa15.93■□□□□ 0.14
LIN54-210ENST00000510877 GNPATO15228 680 aa15.93■□□□□ 0.14
LIN54-210ENST00000510877 HDAC5Q9UQL6 1122 aa15.93■□□□□ 0.14
LIN54-210ENST00000510877 ELL2O00472 640 aaPredicted RBP15.93■□□□□ 0.14
LIN54-210ENST00000510877 CCDC146Q8IYE0 955 aa15.93■□□□□ 0.14
LIN54-210ENST00000510877 TRAPPC3LQ5T215 181 aa15.92■□□□□ 0.14
LIN54-210ENST00000510877 PNISRQ8TF01 805 aaKnown RBP15.92■□□□□ 0.14
LIN54-210ENST00000510877 PCDH11XQ9BZA7 1347 aa15.92■□□□□ 0.14
LIN54-210ENST00000510877 PCDH11YQ9BZA8 1340 aa15.92■□□□□ 0.14
LIN54-210ENST00000510877 RIPK4P57078 832 aa15.91■□□□□ 0.14
LIN54-210ENST00000510877 CARD10Q9BWT7 1032 aa15.91■□□□□ 0.14
LIN54-210ENST00000510877 TEX13AQ9BXU3 409 aaPredicted RBP15.91■□□□□ 0.14
LIN54-210ENST00000510877 CCDC7Q96M83 1385 aa15.9■□□□□ 0.14
LIN54-210ENST00000510877 A0A087WZG4 1122 aa15.9■□□□□ 0.14
LIN54-210ENST00000510877 BTBD11A6QL63 1104 aa15.9■□□□□ 0.14
LIN54-210ENST00000510877 ZBTB7AO95365 584 aa15.9■□□□□ 0.14
LIN54-210ENST00000510877 FTSJ3Q8IY81 847 aaKnown RBP15.9■□□□□ 0.14
LIN54-210ENST00000510877 RIC3Q7Z5B4 369 aa15.89■□□□□ 0.14
LIN54-210ENST00000510877 PREX1Q8TCU6 1659 aa15.89■□□□□ 0.13
LIN54-210ENST00000510877 SOS2Q07890 1332 aaPredicted RBP15.89■□□□□ 0.13
LIN54-210ENST00000510877 FBLN1P23142 703 aa15.89■□□□□ 0.13
LIN54-210ENST00000510877 TNS3Q68CZ2 1445 aa15.89■□□□□ 0.13
LIN54-210ENST00000510877 GORABQ5T7V8 394 aa15.88■□□□□ 0.13
LIN54-210ENST00000510877 SLC4A10Q6U841 1118 aa15.88■□□□□ 0.13
LIN54-210ENST00000510877 CLEC11AQ9Y240 323 aa15.87■□□□□ 0.13
LIN54-210ENST00000510877 GNAT3A8MTJ3 354 aa15.87■□□□□ 0.13
LIN54-210ENST00000510877 EIF2AK4Q9P2K8 1649 aaKnown RBP15.87■□□□□ 0.13
LIN54-210ENST00000510877 MAP3K19Q56UN5 1328 aa15.87■□□□□ 0.13
LIN54-210ENST00000510877 WDR17Q8IZU2 1322 aa15.87■□□□□ 0.13
LIN54-210ENST00000510877 MSL1Q68DK7 614 aa15.87■□□□□ 0.13
LIN54-210ENST00000510877 LRRC7Q96NW7 1537 aa15.87■□□□□ 0.13
LIN54-210ENST00000510877 REREQ9P2R6 1566 aa15.86■□□□□ 0.13
LIN54-210ENST00000510877 HOXC9P31274 260 aa15.86■□□□□ 0.13
LIN54-210ENST00000510877 SBNO1A3KN83 1393 aa15.86■□□□□ 0.13
LIN54-210ENST00000510877 PUS7Q96PZ0 661 aaKnown RBP15.86■□□□□ 0.13
LIN54-210ENST00000510877 FYB1O15117 783 aa15.86■□□□□ 0.13
LIN54-210ENST00000510877 CCDC87Q9NVE4 849 aa15.86■□□□□ 0.13
LIN54-210ENST00000510877 TET3O43151 1660 aa15.85■□□□□ 0.13
LIN54-210ENST00000510877 ST5P78524 1137 aa15.85■□□□□ 0.13
LIN54-210ENST00000510877 VPS37DQ86XT2 251 aa15.85■□□□□ 0.13
LIN54-210ENST00000510877 BCS1LQ9Y276 419 aa15.85■□□□□ 0.13
LIN54-210ENST00000510877 RNF17Q9BXT8 1623 aaKnown RBP15.85■□□□□ 0.13
LIN54-210ENST00000510877 FLT4P35916 1363 aa15.85■□□□□ 0.13
LIN54-210ENST00000510877 FMNL2Q96PY5 1086 aa15.85■□□□□ 0.13
LIN54-210ENST00000510877 BRD4O60885 1362 aaPredicted RBP15.85■□□□□ 0.13
LIN54-210ENST00000510877 FRMPD1Q5SYB0 1578 aa15.85■□□□□ 0.13
LIN54-210ENST00000510877 FRAT1Q92837 279 aaPredicted RBP15.84■□□□□ 0.13
LIN54-210ENST00000510877 RPGRQ92834 1020 aaKnown RBP15.84■□□□□ 0.13
LIN54-210ENST00000510877 PNPLA6Q8IY17 1366 aa15.83■□□□□ 0.13
LIN54-210ENST00000510877 ANKARQ7Z5J8 1434 aa15.83■□□□□ 0.12
LIN54-210ENST00000510877 MYL6BP14649 208 aa15.83■□□□□ 0.12
LIN54-210ENST00000510877 DCCP43146 1447 aa15.83■□□□□ 0.12
LIN54-210ENST00000510877 ZFYVE9O95405 1425 aa15.82■□□□□ 0.12
LIN54-210ENST00000510877 ADAMTS13Q76LX8 1427 aa15.82■□□□□ 0.12
LIN54-210ENST00000510877 PRAG1Q86YV5 1406 aa15.82■□□□□ 0.12
LIN54-210ENST00000510877 ADAMTSL3P82987 1691 aa15.82■□□□□ 0.12
LIN54-210ENST00000510877 ARHGEF25Q86VW2 580 aa15.82■□□□□ 0.12
LIN54-210ENST00000510877 SPATA31D1Q6ZQQ2 1576 aa15.82■□□□□ 0.12
LIN54-210ENST00000510877 DCAF5Q96JK2 942 aa15.82■□□□□ 0.12
LIN54-210ENST00000510877 SETDB2Q96T68 719 aa15.82■□□□□ 0.12
LIN54-210ENST00000510877 LMTK2Q8IWU2 1503 aa15.82■□□□□ 0.12
LIN54-210ENST00000510877 ZNF526Q8TF50 670 aaPredicted RBP15.82■□□□□ 0.12
LIN54-210ENST00000510877 KIF7Q2M1P5 1343 aa15.82■□□□□ 0.12
LIN54-210ENST00000510877 NBPF6Q5VWK0 638 aa15.81■□□□□ 0.12
LIN54-210ENST00000510877 NBPF5PQ86XG9 351 aaPredicted RBP15.81■□□□□ 0.12
LIN54-210ENST00000510877 NBPF4Q96M43 638 aa15.81■□□□□ 0.12
LIN54-210ENST00000510877 CEP152O94986 1710 aa15.81■□□□□ 0.12
LIN54-210ENST00000510877 PRR36Q9H6K5 1346 aa15.8■□□□□ 0.12
LIN54-210ENST00000510877 FCHSD2O94868 740 aa15.8■□□□□ 0.12
LIN54-210ENST00000510877 ANKRD36BQ8N2N9 1353 aa15.8■□□□□ 0.12
LIN54-210ENST00000510877 ARHGAP27Q6ZUM4 889 aa15.8■□□□□ 0.12
LIN54-210ENST00000510877 C9orf78Q9NZ63 289 aaPredicted RBP15.8■□□□□ 0.12
LIN54-210ENST00000510877 ISY1Q9ULR0 285 aaKnown RBP15.8■□□□□ 0.12
LIN54-210ENST00000510877 GRM1Q13255 1194 aa15.8■□□□□ 0.12
LIN54-210ENST00000510877 TXNRD1Q16881 649 aa15.79■□□□□ 0.12
LIN54-210ENST00000510877 POLR3AO14802 1390 aaPredicted RBP15.79■□□□□ 0.12
LIN54-210ENST00000510877 PIK3C2BO00750 1634 aa15.79■□□□□ 0.12
LIN54-210ENST00000510877 PTCH1Q13635 1447 aa15.78■□□□□ 0.12
LIN54-210ENST00000510877 CHMP4BQ9H444 224 aaKnown RBP15.78■□□□□ 0.12
LIN54-210ENST00000510877 ZC3H13Q5T200 1668 aaKnown RBP15.78■□□□□ 0.12
LIN54-210ENST00000510877 EZH2Q15910 746 aaKnown RBP15.78■□□□□ 0.12
LIN54-210ENST00000510877 GNAI1P63096 354 aa15.78■□□□□ 0.12
LIN54-210ENST00000510877 JDP2Q8WYK2 163 aa15.78■□□□□ 0.12
LIN54-210ENST00000510877 SYNMO15061 1565 aa15.78■□□□□ 0.12
LIN54-210ENST00000510877 C3P01024 1663 aa15.77■□□□□ 0.12
LIN54-210ENST00000510877 CFAP44Q96MT7 982 aa15.77■□□□□ 0.12
LIN54-210ENST00000510877 PPRC1Q5VV67 1664 aaKnown RBP15.77■□□□□ 0.11
LIN54-210ENST00000510877 HDGFL1Q5TGJ6 251 aa15.77■□□□□ 0.11
LIN54-210ENST00000510877 NLGN1Q8N2Q7 840 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms