RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 IKQ13123 557 aaPredicted RBP12.56□□□□□ -0.4
NEK1-206ENST00000510533 NBPF8Q3BBV2 869 aa12.56□□□□□ -0.4
NEK1-206ENST00000510533 SKIDA1Q1XH10 827 aa12.56□□□□□ -0.4
NEK1-206ENST00000510533 PRAM1Q96QH2 718 aa12.56□□□□□ -0.4
NEK1-206ENST00000510533 ARHGAP5Q13017 1502 aa12.56□□□□□ -0.4
NEK1-206ENST00000510533 SULT6B1Q6IMI4 303 aa12.56□□□□□ -0.4
NEK1-206ENST00000510533 TSPYL1Q9H0U9 437 aa12.56□□□□□ -0.4
NEK1-206ENST00000510533 KIAA1107Q9UPP5 1409 aa12.55□□□□□ -0.4
NEK1-206ENST00000510533 TRIM22Q8IYM9 498 aa12.55□□□□□ -0.4
NEK1-206ENST00000510533 MPNDQ8N594 471 aa12.55□□□□□ -0.4
NEK1-206ENST00000510533 CBFA2T2O43439 604 aa12.54□□□□□ -0.4
NEK1-206ENST00000510533 KRT18P05783 430 aaKnown RBP12.54□□□□□ -0.4
NEK1-206ENST00000510533 CNNM1Q9NRU3 951 aa12.54□□□□□ -0.4
NEK1-206ENST00000510533 UQCRHLA0A096LP55 91 aa12.54□□□□□ -0.4
NEK1-206ENST00000510533 MAP4K4O95819 1239 aaPredicted RBP12.54□□□□□ -0.4
NEK1-206ENST00000510533 UQCRHP07919 91 aa12.54□□□□□ -0.4
NEK1-206ENST00000510533 ZSCAN31Q96LW9 406 aaPredicted RBP12.54□□□□□ -0.4
NEK1-206ENST00000510533 ESPNB1AK53 854 aa12.54□□□□□ -0.4
NEK1-206ENST00000510533 BLOC1S2Q6QNY1 142 aa12.54□□□□□ -0.4
NEK1-206ENST00000510533 CNKSR2Q8WXI2 1034 aa12.54□□□□□ -0.4
NEK1-206ENST00000510533 FAM177BA6PVY3 158 aa12.54□□□□□ -0.4
NEK1-206ENST00000510533 OSCARQ8IYS5 282 aa12.54□□□□□ -0.4
NEK1-206ENST00000510533 SPATA32Q96LK8 384 aa12.54□□□□□ -0.4
NEK1-206ENST00000510533 PDRG1Q9NUG6 133 aa12.54□□□□□ -0.4
NEK1-206ENST00000510533 CFTRP13569 1480 aa12.54□□□□□ -0.4
NEK1-206ENST00000510533 SYCP1Q15431 976 aa12.53□□□□□ -0.4
NEK1-206ENST00000510533 AFAP1Q8N556 730 aa12.53□□□□□ -0.4
NEK1-206ENST00000510533 STIM1Q13586 685 aa12.53□□□□□ -0.4
NEK1-206ENST00000510533 SIL1Q9H173 461 aa12.53□□□□□ -0.4
NEK1-206ENST00000510533 LUC7LQ9NQ29 371 aaKnown RBP12.53□□□□□ -0.4
NEK1-206ENST00000510533 ERLIN1O75477 346 aa12.53□□□□□ -0.4
NEK1-206ENST00000510533 FAM69CQ0P6D2 419 aa12.53□□□□□ -0.4
NEK1-206ENST00000510533 NACAP1Q9BZK3 213 aa12.53□□□□□ -0.4
NEK1-206ENST00000510533 ERLIN2O94905 339 aa12.53□□□□□ -0.4
NEK1-206ENST00000510533 GNL3LQ9NVN8 582 aaKnown RBP12.53□□□□□ -0.4
NEK1-206ENST00000510533 ERBINQ96RT1 1412 aa12.53□□□□□ -0.4
NEK1-206ENST00000510533 NUP62CLQ9H1M0 184 aa12.52□□□□□ -0.4
NEK1-206ENST00000510533 CFAP45Q9UL16 551 aa12.52□□□□□ -0.4
NEK1-206ENST00000510533 CEP57L1Q8IYX8 460 aa12.52□□□□□ -0.4
NEK1-206ENST00000510533 GOLGA6L10A6NI86 522 aa12.52□□□□□ -0.41
NEK1-206ENST00000510533 CCDC69A6NI79 296 aa12.52□□□□□ -0.41
NEK1-206ENST00000510533 CDK19Q9BWU1 502 aa12.52□□□□□ -0.41
NEK1-206ENST00000510533 DEF6Q9H4E7 631 aa12.52□□□□□ -0.41
NEK1-206ENST00000510533 PPP6R1Q9UPN7 881 aa12.52□□□□□ -0.41
NEK1-206ENST00000510533 CCDC181Q5TID7 509 aa12.52□□□□□ -0.41
NEK1-206ENST00000510533 TXLNBQ8N3L3 684 aa12.52□□□□□ -0.41
NEK1-206ENST00000510533 JAKMIP1Q96N16 626 aaKnown RBP12.52□□□□□ -0.41
NEK1-206ENST00000510533 RBM42Q9BTD8 480 aaKnown RBP12.52□□□□□ -0.41
NEK1-206ENST00000510533 ZNF692Q9BU19 519 aaPredicted RBP12.52□□□□□ -0.41
NEK1-206ENST00000510533 ARAP1Q96P48 1450 aa12.51□□□□□ -0.41
NEK1-206ENST00000510533 MEX3CQ5U5Q3 659 aaKnown RBP12.51□□□□□ -0.41
NEK1-206ENST00000510533 AACSQ86V21 672 aa12.51□□□□□ -0.41
NEK1-206ENST00000510533 RPAP2Q8IXW5 612 aaPredicted RBP12.51□□□□□ -0.41
NEK1-206ENST00000510533 CABP1Q9NZU7 370 aa12.51□□□□□ -0.41
NEK1-206ENST00000510533 EIF3JO75822 258 aaKnown RBP12.51□□□□□ -0.41
NEK1-206ENST00000510533 TATP17735 454 aaPredicted RBP12.51□□□□□ -0.41
NEK1-206ENST00000510533 ZNF428Q96B54 188 aa12.51□□□□□ -0.41
NEK1-206ENST00000510533 ESCO1Q5FWF5 840 aa12.51□□□□□ -0.41
NEK1-206ENST00000510533 PDIA4P13667 645 aaKnown RBP12.51□□□□□ -0.41
NEK1-206ENST00000510533 CCDC184Q52MB2 194 aa12.51□□□□□ -0.41
NEK1-206ENST00000510533 SRGAP3O43295 1099 aa12.5□□□□□ -0.41
NEK1-206ENST00000510533 CDKL5O76039 1030 aa12.5□□□□□ -0.41
NEK1-206ENST00000510533 ZSCAN25Q6NSZ9 544 aa12.5□□□□□ -0.41
NEK1-206ENST00000510533 FAM177A1Q8N128 213 aaPredicted RBP12.5□□□□□ -0.41
NEK1-206ENST00000510533 NOL7Q9UMY1 257 aaKnown RBP12.5□□□□□ -0.41
NEK1-206ENST00000510533 KRT32Q14532 448 aa12.5□□□□□ -0.41
NEK1-206ENST00000510533 CWC27Q6UX04 472 aaKnown RBP12.5□□□□□ -0.41
NEK1-206ENST00000510533 ERICH3Q5RHP9 1530 aa12.5□□□□□ -0.41
NEK1-206ENST00000510533 SLFN5Q08AF3 891 aa12.49□□□□□ -0.41
NEK1-206ENST00000510533 UPF3BQ9BZI7 483 aaKnown RBP12.49□□□□□ -0.41
NEK1-206ENST00000510533 KIAA0754O94854 1291 aa12.49□□□□□ -0.41
NEK1-206ENST00000510533 TXNDC2Q86VQ3 553 aa12.49□□□□□ -0.41
NEK1-206ENST00000510533 C9orf84Q5VXU9 1444 aa12.49□□□□□ -0.41
NEK1-206ENST00000510533 ZNF530Q6P9A1 599 aaPredicted RBP12.49□□□□□ -0.41
NEK1-206ENST00000510533 NUP133Q8WUM0 1156 aa12.49□□□□□ -0.41
NEK1-206ENST00000510533 TANGO6Q9C0B7 1094 aa12.49□□□□□ -0.41
NEK1-206ENST00000510533 CTNNA3Q9UI47 895 aa12.49□□□□□ -0.41
NEK1-206ENST00000510533 FILIP1Q7Z7B0 1213 aa12.48□□□□□ -0.41
NEK1-206ENST00000510533 ZSCAN30Q86W11 494 aa12.48□□□□□ -0.41
NEK1-206ENST00000510533 SMTNL1A8MU46 457 aa12.48□□□□□ -0.41
NEK1-206ENST00000510533 RRP9O43818 475 aaKnown RBP12.48□□□□□ -0.41
NEK1-206ENST00000510533 STK11IPQ8N1F8 1099 aa12.48□□□□□ -0.41
NEK1-206ENST00000510533 IL1RAPL2Q9NP60 686 aa12.48□□□□□ -0.41
NEK1-206ENST00000510533 AQRO60306 1485 aaKnown RBP eCLIP12.48□□□□□ -0.41
NEK1-206ENST00000510533 CABP4P57796 275 aa12.48□□□□□ -0.41
NEK1-206ENST00000510533 FCHSD2O94868 740 aa12.47□□□□□ -0.41
NEK1-206ENST00000510533 MAP3K11Q16584 847 aa12.47□□□□□ -0.41
NEK1-206ENST00000510533 TMEM132AQ24JP5 1023 aa12.47□□□□□ -0.41
NEK1-206ENST00000510533 TMEM57Q8N5G2 664 aa12.47□□□□□ -0.41
NEK1-206ENST00000510533 PKNOX2Q96KN3 472 aa12.47□□□□□ -0.41
NEK1-206ENST00000510533 SYNJ2O15056 1496 aa12.47□□□□□ -0.41
NEK1-206ENST00000510533 EHBP1L1Q8N3D4 1523 aa12.47□□□□□ -0.41
NEK1-206ENST00000510533 SYCE3A1L190 88 aa12.47□□□□□ -0.41
NEK1-206ENST00000510533 NEFHP12036 1026 aa12.47□□□□□ -0.41
NEK1-206ENST00000510533 FKBP4Q02790 459 aaKnown RBP eCLIP12.47□□□□□ -0.41
NEK1-206ENST00000510533 CCDC57Q2TAC2 916 aa12.47□□□□□ -0.41
NEK1-206ENST00000510533 SOGA3Q5TF21 947 aa12.47□□□□□ -0.41
NEK1-206ENST00000510533 IQCEQ6IPM2 695 aa12.47□□□□□ -0.41
NEK1-206ENST00000510533 ZHX3Q9H4I2 956 aa12.47□□□□□ -0.41
NEK1-206ENST00000510533 ANKRD30BQ9BXX2 1392 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms