RNA–Protein interactions for RNA: ENST00000510238.7

CASC16-201, Transcript of cancer susceptibility 16, humanhuman

TSL 1 (best) BASIC

Gene CASC16, Length 955 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC16-201ENST00000510238 POTEFA5A3E0 1075 aa11.96□□□□□ -0.49
CASC16-201ENST00000510238 IRX5P78411 483 aaPredicted RBP11.96□□□□□ -0.49
CASC16-201ENST00000510238 PCGF6Q9BYE7 350 aa11.96□□□□□ -0.49
CASC16-201ENST00000510238 GPRASP1Q5JY77 1395 aa11.95□□□□□ -0.5
CASC16-201ENST00000510238 ARHGEF28Q8N1W1 1705 aaKnown RBP11.95□□□□□ -0.5
CASC16-201ENST00000510238 MINK1Q8N4C8 1332 aaPredicted RBP11.95□□□□□ -0.5
CASC16-201ENST00000510238 SOX12O15370 315 aa11.95□□□□□ -0.5
CASC16-201ENST00000510238 HAP1P54257 671 aaPredicted RBP11.95□□□□□ -0.5
CASC16-201ENST00000510238 PMFBP1Q8TBY8 1022 aa11.95□□□□□ -0.5
CASC16-201ENST00000510238 NWD2Q9ULI1 1742 aa11.94□□□□□ -0.5
CASC16-201ENST00000510238 PRR36Q9H6K5 1346 aa11.94□□□□□ -0.5
CASC16-201ENST00000510238 CCDC125Q86Z20 511 aa11.94□□□□□ -0.5
CASC16-201ENST00000510238 HIRIP3Q9BW71 556 aaPredicted RBP11.94□□□□□ -0.5
CASC16-201ENST00000510238 TRPM3Q9HCF6 1732 aaPredicted RBP11.94□□□□□ -0.5
CASC16-201ENST00000510238 COLQQ9Y215 455 aaPredicted RBP11.93□□□□□ -0.5
CASC16-201ENST00000510238 ITSN1Q15811 1721 aa11.93□□□□□ -0.5
CASC16-201ENST00000510238 ABCA3Q99758 1704 aa11.93□□□□□ -0.5
CASC16-201ENST00000510238 EP400Q96L91 3159 aa11.92□□□□□ -0.5
CASC16-201ENST00000510238 ALS2Q96Q42 1657 aa11.92□□□□□ -0.5
CASC16-201ENST00000510238 RALGAPBQ86X10 1494 aa11.92□□□□□ -0.5
CASC16-201ENST00000510238 VPS72Q15906 364 aa11.92□□□□□ -0.5
CASC16-201ENST00000510238 LMOD2Q6P5Q4 547 aa11.92□□□□□ -0.5
CASC16-201ENST00000510238 OCEL1Q9H607 264 aa11.92□□□□□ -0.5
CASC16-201ENST00000510238 GLI3P10071 1580 aa11.92□□□□□ -0.5
CASC16-201ENST00000510238 ATP7BP35670 1465 aa11.91□□□□□ -0.5
CASC16-201ENST00000510238 NGDNQ8NEJ9 315 aaKnown RBP11.91□□□□□ -0.5
CASC16-201ENST00000510238 CABLES1Q8TDN4 633 aa11.91□□□□□ -0.5
CASC16-201ENST00000510238 PLCH1Q4KWH8 1693 aa11.91□□□□□ -0.5
CASC16-201ENST00000510238 ONECUT3O60422 494 aaPredicted RBP11.9□□□□□ -0.5
CASC16-201ENST00000510238 SEC24BO95487 1268 aa11.9□□□□□ -0.5
CASC16-201ENST00000510238 NUDT16Q96DE0 195 aaKnown RBP11.9□□□□□ -0.5
CASC16-201ENST00000510238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.9□□□□□ -0.5
CASC16-201ENST00000510238 POLR3AO14802 1390 aaPredicted RBP11.89□□□□□ -0.51
CASC16-201ENST00000510238 FAM83GA6ND36 823 aa11.88□□□□□ -0.51
CASC16-201ENST00000510238 PLCG2P16885 1265 aa11.88□□□□□ -0.51
CASC16-201ENST00000510238 NKX1-1Q15270 411 aaPredicted RBP11.88□□□□□ -0.51
CASC16-201ENST00000510238 PDCD7Q8N8D1 485 aaKnown RBP11.88□□□□□ -0.51
CASC16-201ENST00000510238 CDK19Q9BWU1 502 aa11.88□□□□□ -0.51
CASC16-201ENST00000510238 MFRPQ9BY79 579 aa11.88□□□□□ -0.51
CASC16-201ENST00000510238 COL14A1Q05707 1796 aaKnown RBP11.87□□□□□ -0.51
CASC16-201ENST00000510238 CRYBG1Q9Y4K1 1723 aa11.87□□□□□ -0.51
CASC16-201ENST00000510238 PLEKHG3A1L390 1219 aa11.87□□□□□ -0.51
CASC16-201ENST00000510238 TOPAZ1Q8N9V7 1692 aa11.87□□□□□ -0.51
CASC16-201ENST00000510238 NRAPQ86VF7 1730 aa11.86□□□□□ -0.51
CASC16-201ENST00000510238 NBPF1Q3BBV0 1214 aa11.86□□□□□ -0.51
CASC16-201ENST00000510238 SEPT12Q8IYM1 358 aa11.86□□□□□ -0.51
CASC16-201ENST00000510238 FBXO22Q8NEZ5 403 aa11.86□□□□□ -0.51
CASC16-201ENST00000510238 BLMP54132 1417 aaPredicted RBP11.86□□□□□ -0.51
CASC16-201ENST00000510238 CENPJQ9HC77 1338 aaPredicted RBP11.86□□□□□ -0.51
CASC16-201ENST00000510238 BRD4O60885 1362 aaPredicted RBP11.85□□□□□ -0.51
CASC16-201ENST00000510238 POTEB2H3BUK9 544 aa11.85□□□□□ -0.51
CASC16-201ENST00000510238 NLRP6P59044 892 aa11.85□□□□□ -0.51
CASC16-201ENST00000510238 BBXQ8WY36 941 aaPredicted RBP11.85□□□□□ -0.51
CASC16-201ENST00000510238 BTG4Q9NY30 223 aa11.85□□□□□ -0.51
CASC16-201ENST00000510238 CCDC9Q9Y3X0 531 aaKnown RBP11.85□□□□□ -0.51
CASC16-201ENST00000510238 ACEP12821 1306 aa11.85□□□□□ -0.51
CASC16-201ENST00000510238 BRWD3Q6RI45 1802 aa11.84□□□□□ -0.51
CASC16-201ENST00000510238 NBPF8Q3BBV2 869 aa11.84□□□□□ -0.51
CASC16-201ENST00000510238 MS4A4AQ96JQ5 239 aa11.84□□□□□ -0.51
CASC16-201ENST00000510238 KRT27Q7Z3Y8 459 aa11.83□□□□□ -0.52
CASC16-201ENST00000510238 L3MBTL2Q969R5 705 aa11.83□□□□□ -0.52
CASC16-201ENST00000510238 PRDM11Q9NQV5 511 aa11.83□□□□□ -0.52
CASC16-201ENST00000510238 SRPK2P78362 688 aaKnown RBP11.82□□□□□ -0.52
CASC16-201ENST00000510238 SPATA31A5Q5VU36 1347 aa11.82□□□□□ -0.52
CASC16-201ENST00000510238 SPATA31A7Q8IWB4 1347 aa11.82□□□□□ -0.52
CASC16-201ENST00000510238 PHRF1Q9P1Y6 1649 aaKnown RBP11.82□□□□□ -0.52
CASC16-201ENST00000510238 PPIP5K1Q6PFW1 1433 aa11.81□□□□□ -0.52
CASC16-201ENST00000510238 SF3B2Q13435 895 aaKnown RBP11.81□□□□□ -0.52
CASC16-201ENST00000510238 DPY19L2Q6NUT2 758 aa11.81□□□□□ -0.52
CASC16-201ENST00000510238 SRCAPQ6ZRS2 3230 aa11.81□□□□□ -0.52
CASC16-201ENST00000510238 QRICH2Q9H0J4 1663 aa11.81□□□□□ -0.52
CASC16-201ENST00000510238 KIAA0232Q92628 1395 aa11.8□□□□□ -0.52
CASC16-201ENST00000510238 TRPM1Q7Z4N2 1603 aa11.8□□□□□ -0.52
CASC16-201ENST00000510238 FAM98CQ17RN3 349 aaKnown RBP11.8□□□□□ -0.52
CASC16-201ENST00000510238 ABTB2Q8N961 1025 aa11.8□□□□□ -0.52
CASC16-201ENST00000510238 USP19O94966 1318 aa11.8□□□□□ -0.52
CASC16-201ENST00000510238 CPDO75976 1380 aa11.79□□□□□ -0.52
CASC16-201ENST00000510238 POTEJP0CG39 1038 aa11.79□□□□□ -0.52
CASC16-201ENST00000510238 LHX8Q68G74 356 aa11.79□□□□□ -0.52
CASC16-201ENST00000510238 NLRP13Q86W25 1043 aa11.79□□□□□ -0.52
CASC16-201ENST00000510238 EVC2Q86UK5 1308 aa11.79□□□□□ -0.52
CASC16-201ENST00000510238 THSD7AQ9UPZ6 1657 aa11.78□□□□□ -0.52
CASC16-201ENST00000510238 A0A0G2JS52 829 aa11.78□□□□□ -0.52
CASC16-201ENST00000510238 MYT1Q01538 1121 aa11.78□□□□□ -0.52
CASC16-201ENST00000510238 SIN3AQ96ST3 1273 aa11.78□□□□□ -0.52
CASC16-201ENST00000510238 NRKQ7Z2Y5 1582 aa11.78□□□□□ -0.52
CASC16-201ENST00000510238 SPATA31A1Q5TZJ5 1347 aa11.78□□□□□ -0.52
CASC16-201ENST00000510238 ROCK2O75116 1388 aaKnown RBP11.78□□□□□ -0.52
CASC16-201ENST00000510238 ZC3H6P61129 1189 aaKnown RBP11.77□□□□□ -0.53
CASC16-201ENST00000510238 USP6P35125 1406 aa11.77□□□□□ -0.53
CASC16-201ENST00000510238 GTPBP6O43824 516 aaPredicted RBP11.76□□□□□ -0.53
CASC16-201ENST00000510238 GCP02774 474 aa11.76□□□□□ -0.53
CASC16-201ENST00000510238 NEUROD1Q13562 356 aa11.76□□□□□ -0.53
CASC16-201ENST00000510238 CHRNA2Q15822 529 aa11.76□□□□□ -0.53
CASC16-201ENST00000510238 NUTM2GQ5VZR2 741 aa11.76□□□□□ -0.53
CASC16-201ENST00000510238 L3MBTL3Q96JM7 780 aaPredicted RBP11.76□□□□□ -0.53
CASC16-201ENST00000510238 CABP1Q9NZU7 370 aa11.76□□□□□ -0.53
CASC16-201ENST00000510238 SSH2Q76I76 1423 aa11.76□□□□□ -0.53
CASC16-201ENST00000510238 BAG6P46379 1132 aa11.75□□□□□ -0.53
CASC16-201ENST00000510238 BARGINQ6ZT62 677 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms