RNA–Protein interactions for RNA: ENST00000510003.5

SNCAIP-214, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,039 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-214ENST00000510003 ARHGEF40Q8TER5 1519 aa18.09■□□□□ 0.49
SNCAIP-214ENST00000510003 ZBTB7BO15156 539 aaPredicted RBP18.09■□□□□ 0.49
SNCAIP-214ENST00000510003 CDC45O75419 566 aa18.09■□□□□ 0.49
SNCAIP-214ENST00000510003 NUCB2P80303 420 aa18.09■□□□□ 0.49
SNCAIP-214ENST00000510003 PNPLA6Q8IY17 1366 aa18.09■□□□□ 0.49
SNCAIP-214ENST00000510003 CD2BP2O95400 341 aaKnown RBP18.08■□□□□ 0.49
SNCAIP-214ENST00000510003 SSFA2P28290 1259 aa18.08■□□□□ 0.49
SNCAIP-214ENST00000510003 RABEP1Q15276 862 aa18.08■□□□□ 0.49
SNCAIP-214ENST00000510003 ANKRD45Q5TZF3 282 aa18.08■□□□□ 0.49
SNCAIP-214ENST00000510003 KIAA1211Q6ZU35 1233 aa18.08■□□□□ 0.49
SNCAIP-214ENST00000510003 NPATQ14207 1427 aa18.08■□□□□ 0.48
SNCAIP-214ENST00000510003 MSNP26038 577 aaKnown RBP18.08■□□□□ 0.48
SNCAIP-214ENST00000510003 DDX49Q9Y6V7 483 aaKnown RBP18.08■□□□□ 0.48
SNCAIP-214ENST00000510003 A0A1W2PP64 1363 aa18.08■□□□□ 0.48
SNCAIP-214ENST00000510003 ZFYVE9O95405 1425 aa18.07■□□□□ 0.48
SNCAIP-214ENST00000510003 TMEM132EQ6IEE7 984 aa18.07■□□□□ 0.48
SNCAIP-214ENST00000510003 GAS2L2Q8NHY3 880 aa18.07■□□□□ 0.48
SNCAIP-214ENST00000510003 CHGAP10645 457 aaKnown RBP18.06■□□□□ 0.48
SNCAIP-214ENST00000510003 SIGLEC1Q9BZZ2 1709 aa18.06■□□□□ 0.48
SNCAIP-214ENST00000510003 CALD1Q05682 793 aaKnown RBP18.05■□□□□ 0.48
SNCAIP-214ENST00000510003 MAP7D2Q96T17 732 aa18.05■□□□□ 0.48
SNCAIP-214ENST00000510003 KIF24Q5T7B8 1368 aa18.05■□□□□ 0.48
SNCAIP-214ENST00000510003 ATAD2Q6PL18 1390 aa18.05■□□□□ 0.48
SNCAIP-214ENST00000510003 DIAPH1O60610 1272 aaKnown RBP18.05■□□□□ 0.48
SNCAIP-214ENST00000510003 FCHSD2O94868 740 aa18.05■□□□□ 0.48
SNCAIP-214ENST00000510003 CWC22Q9HCG8 908 aaKnown RBP18.05■□□□□ 0.48
SNCAIP-214ENST00000510003 PIK3C2BO00750 1634 aa18.04■□□□□ 0.48
SNCAIP-214ENST00000510003 CYP2E1P05181 493 aaPredicted RBP18.04■□□□□ 0.48
SNCAIP-214ENST00000510003 VGFO15240 615 aaPredicted RBP18.03■□□□□ 0.48
SNCAIP-214ENST00000510003 ABCC4O15439 1325 aa18.03■□□□□ 0.48
SNCAIP-214ENST00000510003 ZNF500O60304 480 aaPredicted RBP18.03■□□□□ 0.48
SNCAIP-214ENST00000510003 MLECQ14165 292 aa18.03■□□□□ 0.48
SNCAIP-214ENST00000510003 MRPL50Q8N5N7 158 aaKnown RBP18.03■□□□□ 0.48
SNCAIP-214ENST00000510003 PDLIM2Q96JY6 352 aa18.03■□□□□ 0.48
SNCAIP-214ENST00000510003 TERF2IPQ9NYB0 399 aa18.03■□□□□ 0.48
SNCAIP-214ENST00000510003 FAM135BQ49AJ0 1406 aa18.02■□□□□ 0.48
SNCAIP-214ENST00000510003 CLTCQ00610 1675 aaKnown RBP18.02■□□□□ 0.48
SNCAIP-214ENST00000510003 GGT6Q6P531 493 aa18.02■□□□□ 0.48
SNCAIP-214ENST00000510003 CABP2Q9NPB3 220 aa18.02■□□□□ 0.48
SNCAIP-214ENST00000510003 NOL7Q9UMY1 257 aaKnown RBP18.02■□□□□ 0.48
SNCAIP-214ENST00000510003 NEXMIFQ5QGS0 1516 aa18.02■□□□□ 0.48
SNCAIP-214ENST00000510003 CAMSAP1Q5T5Y3 1602 aa18.02■□□□□ 0.47
SNCAIP-214ENST00000510003 MCM5P33992 734 aa18.01■□□□□ 0.47
SNCAIP-214ENST00000510003 FOXD4L1Q9NU39 408 aa18.01■□□□□ 0.47
SNCAIP-214ENST00000510003 RBM42Q9BTD8 480 aaKnown RBP18.01■□□□□ 0.47
SNCAIP-214ENST00000510003 LRRC7Q96NW7 1537 aa18■□□□□ 0.47
SNCAIP-214ENST00000510003 FYB1O15117 783 aa18■□□□□ 0.47
SNCAIP-214ENST00000510003 GGNBP2Q9H3C7 697 aa18■□□□□ 0.47
SNCAIP-214ENST00000510003 LMBRD1Q9NUN5 540 aa18■□□□□ 0.47
SNCAIP-214ENST00000510003 VAMP4O75379 141 aa17.99■□□□□ 0.47
SNCAIP-214ENST00000510003 ZSCAN23Q3MJ62 389 aa17.99■□□□□ 0.47
SNCAIP-214ENST00000510003 SIRT2Q8IXJ6 389 aa17.99■□□□□ 0.47
SNCAIP-214ENST00000510003 ABCC3O15438 1527 aa17.98■□□□□ 0.47
SNCAIP-214ENST00000510003 AGLP35573 1532 aa17.98■□□□□ 0.47
SNCAIP-214ENST00000510003 CD163L1Q9NR16 1453 aa17.98■□□□□ 0.47
SNCAIP-214ENST00000510003 CSPP1Q1MSJ5 1256 aa17.98■□□□□ 0.47
SNCAIP-214ENST00000510003 MCTP1Q6DN14 999 aa17.98■□□□□ 0.47
SNCAIP-214ENST00000510003 API5Q9BZZ5 524 aaKnown RBP17.98■□□□□ 0.47
SNCAIP-214ENST00000510003 IFT57Q9NWB7 429 aa17.98■□□□□ 0.47
SNCAIP-214ENST00000510003 GNAI1P63096 354 aa17.97■□□□□ 0.47
SNCAIP-214ENST00000510003 GSPT1P15170 499 aaKnown RBP17.96■□□□□ 0.47
SNCAIP-214ENST00000510003 INTS3Q68E01 1043 aaKnown RBP17.96■□□□□ 0.47
SNCAIP-214ENST00000510003 MTERF4Q7Z6M4 381 aaKnown RBP17.96■□□□□ 0.47
SNCAIP-214ENST00000510003 PLEKHM2Q8IWE5 1019 aa17.96■□□□□ 0.47
SNCAIP-214ENST00000510003 NFE2L2Q16236 605 aa17.96■□□□□ 0.47
SNCAIP-214ENST00000510003 TTC22Q5TAA0 569 aa17.96■□□□□ 0.47
SNCAIP-214ENST00000510003 CAVIN1Q6NZI2 390 aaKnown RBP17.96■□□□□ 0.47
SNCAIP-214ENST00000510003 USP26Q9BXU7 913 aa17.96■□□□□ 0.47
SNCAIP-214ENST00000510003 KIF20BQ96Q89 1820 aa17.96■□□□□ 0.46
SNCAIP-214ENST00000510003 SRPK2P78362 688 aaKnown RBP17.95■□□□□ 0.46
SNCAIP-214ENST00000510003 DCTPP1Q9H773 170 aa17.95■□□□□ 0.46
SNCAIP-214ENST00000510003 ST18O60284 1047 aa17.94■□□□□ 0.46
SNCAIP-214ENST00000510003 ZNF853P0CG23 659 aa17.94■□□□□ 0.46
SNCAIP-214ENST00000510003 CASC1Q6TDU7 716 aa17.94■□□□□ 0.46
SNCAIP-214ENST00000510003 HDGFL2Q7Z4V5 671 aaPredicted RBP17.94■□□□□ 0.46
SNCAIP-214ENST00000510003 RBSNQ9H1K0 784 aa17.94■□□□□ 0.46
SNCAIP-214ENST00000510003 PTPRMP28827 1452 aa17.93■□□□□ 0.46
SNCAIP-214ENST00000510003 C1orf115Q9H7X2 142 aa17.93■□□□□ 0.46
SNCAIP-214ENST00000510003 ZKSCAN5Q9Y2L8 839 aa17.93■□□□□ 0.46
SNCAIP-214ENST00000510003 PRKAR2BP31323 418 aa17.93■□□□□ 0.46
SNCAIP-214ENST00000510003 LRSAM1Q6UWE0 723 aa17.92■□□□□ 0.46
SNCAIP-214ENST00000510003 CCDC39Q9UFE4 941 aa17.91■□□□□ 0.46
SNCAIP-214ENST00000510003 MBD3O95983 291 aa17.91■□□□□ 0.46
SNCAIP-214ENST00000510003 NCLP19338 710 aaKnown RBP17.91■□□□□ 0.46
SNCAIP-214ENST00000510003 PRIM1P49642 420 aaKnown RBP17.91■□□□□ 0.46
SNCAIP-214ENST00000510003 LMOD3Q0VAK6 560 aa17.91■□□□□ 0.46
SNCAIP-214ENST00000510003 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.91■□□□□ 0.46
SNCAIP-214ENST00000510003 DYNC1I1O14576 645 aa17.9■□□□□ 0.46
SNCAIP-214ENST00000510003 REC8O95072 547 aa17.89■□□□□ 0.46
SNCAIP-214ENST00000510003 R3HCC1Q9Y3T6 440 aaKnown RBP17.89■□□□□ 0.46
SNCAIP-214ENST00000510003 KNDC1Q76NI1 1749 aa17.89■□□□□ 0.45
SNCAIP-214ENST00000510003 TWISTNBQ3B726 338 aaPredicted RBP17.88■□□□□ 0.45
SNCAIP-214ENST00000510003 RPAP2Q8IXW5 612 aaPredicted RBP17.88■□□□□ 0.45
SNCAIP-214ENST00000510003 ANKRD44Q8N8A2 993 aa17.88■□□□□ 0.45
SNCAIP-214ENST00000510003 GPT2Q8TD30 523 aa17.88■□□□□ 0.45
SNCAIP-214ENST00000510003 PRPF40AO75400 957 aaKnown RBP17.88■□□□□ 0.45
SNCAIP-214ENST00000510003 TSPYL6Q8N831 410 aa17.88■□□□□ 0.45
SNCAIP-214ENST00000510003 MBIPQ9NS73 344 aa17.88■□□□□ 0.45
SNCAIP-214ENST00000510003 CFAP65Q6ZU64 1925 aaKnown RBP17.87■□□□□ 0.45
SNCAIP-214ENST00000510003 CPSF1Q10570 1443 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms