RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 TOPAZ1Q8N9V7 1692 aa19.2■□□□□ 0.66
PHF3-209ENST00000509330 AMPHP49418 695 aa19.2■□□□□ 0.66
PHF3-209ENST00000509330 ADAMTSL3P82987 1691 aa19.19■□□□□ 0.66
PHF3-209ENST00000509330 SSH1Q8WYL5 1049 aa19.19■□□□□ 0.66
PHF3-209ENST00000509330 XRN1Q8IZH2 1706 aaKnown RBP19.19■□□□□ 0.66
PHF3-209ENST00000509330 RGS3P49796 1198 aa19.17■□□□□ 0.66
PHF3-209ENST00000509330 LMOD2Q6P5Q4 547 aa19.17■□□□□ 0.66
PHF3-209ENST00000509330 NRKQ7Z2Y5 1582 aa19.17■□□□□ 0.66
PHF3-209ENST00000509330 PHF8Q9UPP1 1060 aa19.17■□□□□ 0.66
PHF3-209ENST00000509330 FTSJ3Q8IY81 847 aaKnown RBP19.16■□□□□ 0.66
PHF3-209ENST00000509330 SSH2Q76I76 1423 aa19.15■□□□□ 0.66
PHF3-209ENST00000509330 IGHDP01880 384 aa19.15■□□□□ 0.66
PHF3-209ENST00000509330 ORAI2Q96SN7 254 aa19.15■□□□□ 0.66
PHF3-209ENST00000509330 NPHP4O75161 1426 aaPredicted RBP19.15■□□□□ 0.66
PHF3-209ENST00000509330 PDE3AQ14432 1141 aa19.15■□□□□ 0.66
PHF3-209ENST00000509330 MCM10Q7L590 875 aa19.15■□□□□ 0.66
PHF3-209ENST00000509330 NPM2Q86SE8 214 aaKnown RBP19.15■□□□□ 0.66
PHF3-209ENST00000509330 TTC21AQ8NDW8 1320 aa19.15■□□□□ 0.66
PHF3-209ENST00000509330 HSPA2P54652 639 aa19.14■□□□□ 0.66
PHF3-209ENST00000509330 TSPYL6Q8N831 410 aa19.14■□□□□ 0.66
PHF3-209ENST00000509330 KDM2BQ8NHM5 1336 aa19.14■□□□□ 0.66
PHF3-209ENST00000509330 PIK3R4Q99570 1358 aa19.14■□□□□ 0.65
PHF3-209ENST00000509330 FOXO3O43524 673 aa19.14■□□□□ 0.65
PHF3-209ENST00000509330 PSME1Q06323 249 aa19.13■□□□□ 0.65
PHF3-209ENST00000509330 NOB1Q9ULX3 412 aaKnown RBP19.13■□□□□ 0.65
PHF3-209ENST00000509330 ZKSCAN2Q63HK3 967 aa19.12■□□□□ 0.65
PHF3-209ENST00000509330 CENPQQ7L2Z9 268 aaPredicted RBP19.12■□□□□ 0.65
PHF3-209ENST00000509330 MBIPQ9NS73 344 aa19.12■□□□□ 0.65
PHF3-209ENST00000509330 PROSER2Q86WR7 435 aaPredicted RBP19.12■□□□□ 0.65
PHF3-209ENST00000509330 PEAK1Q9H792 1746 aa19.12■□□□□ 0.65
PHF3-209ENST00000509330 MSH5O43196 834 aa19.11■□□□□ 0.65
PHF3-209ENST00000509330 SETD1BQ9UPS6 1966 aaKnown RBP19.11■□□□□ 0.65
PHF3-209ENST00000509330 USP31Q70CQ4 1352 aa19.11■□□□□ 0.65
PHF3-209ENST00000509330 IL16Q14005 1332 aa19.11■□□□□ 0.65
PHF3-209ENST00000509330 TRIM27P14373 513 aa19.11■□□□□ 0.65
PHF3-209ENST00000509330 USHBP1Q8N6Y0 703 aa19.11■□□□□ 0.65
PHF3-209ENST00000509330 NALCNQ8IZF0 1738 aa19.1■□□□□ 0.65
PHF3-209ENST00000509330 KRT24Q2M2I5 525 aa19.1■□□□□ 0.65
PHF3-209ENST00000509330 NCBP3Q53F19 620 aaKnown RBP19.1■□□□□ 0.65
PHF3-209ENST00000509330 ITPRIPQ8IWB1 547 aa19.1■□□□□ 0.65
PHF3-209ENST00000509330 DZIP1LQ8IYY4 767 aaKnown RBP19.1■□□□□ 0.65
PHF3-209ENST00000509330 EYA1Q99502 592 aa19.09■□□□□ 0.65
PHF3-209ENST00000509330 MIS18AQ9NYP9 233 aa19.09■□□□□ 0.65
PHF3-209ENST00000509330 PCDHB15Q9Y5E8 787 aa19.09■□□□□ 0.65
PHF3-209ENST00000509330 PDE4AP27815 886 aa19.08■□□□□ 0.65
PHF3-209ENST00000509330 ZNF142P52746 1687 aaPredicted RBP19.08■□□□□ 0.65
PHF3-209ENST00000509330 PIK3C2AO00443 1686 aa19.08■□□□□ 0.65
PHF3-209ENST00000509330 ANKARQ7Z5J8 1434 aa19.08■□□□□ 0.65
PHF3-209ENST00000509330 CHD2O14647 1828 aaKnown RBP19.08■□□□□ 0.64
PHF3-209ENST00000509330 FLT4P35916 1363 aa19.08■□□□□ 0.64
PHF3-209ENST00000509330 C8orf58Q8NAV2 365 aa19.07■□□□□ 0.64
PHF3-209ENST00000509330 GNAI1P63096 354 aa19.07■□□□□ 0.64
PHF3-209ENST00000509330 SBNO1A3KN83 1393 aa19.06■□□□□ 0.64
PHF3-209ENST00000509330 FMN2Q9NZ56 1722 aa19.06■□□□□ 0.64
PHF3-209ENST00000509330 HOXC9P31274 260 aa19.06■□□□□ 0.64
PHF3-209ENST00000509330 DDX17Q92841 729 aaKnown RBP19.06■□□□□ 0.64
PHF3-209ENST00000509330 MVPQ14764 893 aaKnown RBP19.05■□□□□ 0.64
PHF3-209ENST00000509330 MTHFSDQ2M296 383 aaKnown RBP19.05■□□□□ 0.64
PHF3-209ENST00000509330 ATF7IPQ6VMQ6 1270 aa19.05■□□□□ 0.64
PHF3-209ENST00000509330 ADGRL3Q9HAR2 1447 aa19.05■□□□□ 0.64
PHF3-209ENST00000509330 TMEM57Q8N5G2 664 aa19.05■□□□□ 0.64
PHF3-209ENST00000509330 IFT57Q9NWB7 429 aa19.05■□□□□ 0.64
PHF3-209ENST00000509330 LMOD3Q0VAK6 560 aa19.05■□□□□ 0.64
PHF3-209ENST00000509330 TWISTNBQ3B726 338 aaPredicted RBP19.04■□□□□ 0.64
PHF3-209ENST00000509330 VAMP4O75379 141 aa19.04■□□□□ 0.64
PHF3-209ENST00000509330 CALD1Q05682 793 aaKnown RBP19.04■□□□□ 0.64
PHF3-209ENST00000509330 CT47B1P0C2W7 299 aaPredicted RBP19.03■□□□□ 0.64
PHF3-209ENST00000509330 CFAP44Q96MT7 982 aa19.03■□□□□ 0.64
PHF3-209ENST00000509330 DLG5Q8TDM6 1919 aa19.02■□□□□ 0.64
PHF3-209ENST00000509330 ZNF853P0CG23 659 aa19.01■□□□□ 0.63
PHF3-209ENST00000509330 BACH2Q9BYV9 841 aa19■□□□□ 0.63
PHF3-209ENST00000509330 RTF1Q92541 710 aaKnown RBP19■□□□□ 0.63
PHF3-209ENST00000509330 KIF16BQ96L93 1317 aa18.99■□□□□ 0.63
PHF3-209ENST00000509330 LRRC59Q96AG4 307 aaKnown RBP18.99■□□□□ 0.63
PHF3-209ENST00000509330 BCL11AQ9H165 835 aa18.99■□□□□ 0.63
PHF3-209ENST00000509330 C1orf115Q9H7X2 142 aa18.98■□□□□ 0.63
PHF3-209ENST00000509330 IGSF1Q8N6C5 1336 aa18.97■□□□□ 0.63
PHF3-209ENST00000509330 ANP32AP39687 249 aaKnown RBP18.97■□□□□ 0.63
PHF3-209ENST00000509330 MRPL50Q8N5N7 158 aaKnown RBP18.97■□□□□ 0.63
PHF3-209ENST00000509330 ARHGEF10O15013 1369 aa18.97■□□□□ 0.63
PHF3-209ENST00000509330 MS4A1P11836 297 aa18.97■□□□□ 0.63
PHF3-209ENST00000509330 IPO8O15397 1037 aaKnown RBP18.96■□□□□ 0.63
PHF3-209ENST00000509330 ALDH1L2Q3SY69 923 aa18.96■□□□□ 0.63
PHF3-209ENST00000509330 ERICH6Q7L0X2 663 aa18.96■□□□□ 0.63
PHF3-209ENST00000509330 TMEM94Q12767 1356 aa18.95■□□□□ 0.62
PHF3-209ENST00000509330 KRT28Q7Z3Y7 464 aa18.95■□□□□ 0.62
PHF3-209ENST00000509330 NECTIN2Q92692 538 aa18.95■□□□□ 0.62
PHF3-209ENST00000509330 TSPYL4Q9UJ04 414 aa18.95■□□□□ 0.62
PHF3-209ENST00000509330 DDX19BQ9UMR2 479 aa18.95■□□□□ 0.62
PHF3-209ENST00000509330 ATF3P18847 181 aa18.94■□□□□ 0.62
PHF3-209ENST00000509330 ZC3H6P61129 1189 aaKnown RBP18.94■□□□□ 0.62
PHF3-209ENST00000509330 NBPF6Q5VWK0 638 aa18.94■□□□□ 0.62
PHF3-209ENST00000509330 NBPF4Q96M43 638 aa18.94■□□□□ 0.62
PHF3-209ENST00000509330 C19orf44Q9H6X5 657 aa18.94■□□□□ 0.62
PHF3-209ENST00000509330 GCP02774 474 aa18.94■□□□□ 0.62
PHF3-209ENST00000509330 PDZRN3Q9UPQ7 1066 aa18.93■□□□□ 0.62
PHF3-209ENST00000509330 CHL1O00533 1208 aa18.92■□□□□ 0.62
PHF3-209ENST00000509330 RWDD1Q9H446 243 aaPredicted RBP18.92■□□□□ 0.62
PHF3-209ENST00000509330 MARF1Q9Y4F3 1742 aaKnown RBP18.92■□□□□ 0.62
PHF3-209ENST00000509330 RGPD1P0DJD0 1748 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms