RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 TRIM26Q12899 539 aaPredicted RBP11.41□□□□□ -0.58
UBE2D3-222ENST00000508238 NEUROD1Q13562 356 aa11.41□□□□□ -0.58
UBE2D3-222ENST00000508238 NBPF8Q3BBV2 869 aa11.41□□□□□ -0.58
UBE2D3-222ENST00000508238 LMOD2Q6P5Q4 547 aa11.41□□□□□ -0.58
UBE2D3-222ENST00000508238 ITSN1Q15811 1721 aa11.4□□□□□ -0.58
UBE2D3-222ENST00000508238 ALS2Q96Q42 1657 aa11.4□□□□□ -0.58
UBE2D3-222ENST00000508238 FAM83GA6ND36 823 aa11.4□□□□□ -0.58
UBE2D3-222ENST00000508238 HAP1P54257 671 aaPredicted RBP11.4□□□□□ -0.58
UBE2D3-222ENST00000508238 SPRYD3Q8NCJ5 442 aa11.4□□□□□ -0.58
UBE2D3-222ENST00000508238 ONECUT3O60422 494 aaPredicted RBP11.39□□□□□ -0.59
UBE2D3-222ENST00000508238 VPS72Q15906 364 aa11.39□□□□□ -0.59
UBE2D3-222ENST00000508238 ACEP12821 1306 aa11.38□□□□□ -0.59
UBE2D3-222ENST00000508238 NWD2Q9ULI1 1742 aa11.38□□□□□ -0.59
UBE2D3-222ENST00000508238 NKX1-1Q15270 411 aaPredicted RBP11.38□□□□□ -0.59
UBE2D3-222ENST00000508238 ABCA3Q99758 1704 aa11.38□□□□□ -0.59
UBE2D3-222ENST00000508238 TOPAZ1Q8N9V7 1692 aa11.37□□□□□ -0.59
UBE2D3-222ENST00000508238 SRPK2P78362 688 aaKnown RBP11.37□□□□□ -0.59
UBE2D3-222ENST00000508238 TRPM1Q7Z4N2 1603 aa11.37□□□□□ -0.59
UBE2D3-222ENST00000508238 BRD4O60885 1362 aaPredicted RBP11.37□□□□□ -0.59
UBE2D3-222ENST00000508238 ATAD2Q6PL18 1390 aa11.37□□□□□ -0.59
UBE2D3-222ENST00000508238 RALGAPBQ86X10 1494 aa11.37□□□□□ -0.59
UBE2D3-222ENST00000508238 CABP2Q9NPB3 220 aa11.36□□□□□ -0.59
UBE2D3-222ENST00000508238 ROCK2O75116 1388 aaKnown RBP11.36□□□□□ -0.59
UBE2D3-222ENST00000508238 EVC2Q86UK5 1308 aa11.35□□□□□ -0.59
UBE2D3-222ENST00000508238 EP400Q96L91 3159 aa11.35□□□□□ -0.59
UBE2D3-222ENST00000508238 CCDC125Q86Z20 511 aa11.35□□□□□ -0.59
UBE2D3-222ENST00000508238 MS4A3Q96HJ5 214 aa11.35□□□□□ -0.59
UBE2D3-222ENST00000508238 GLI3P10071 1580 aa11.35□□□□□ -0.59
UBE2D3-222ENST00000508238 CRYBG1Q9Y4K1 1723 aa11.35□□□□□ -0.59
UBE2D3-222ENST00000508238 PLCH1Q4KWH8 1693 aa11.34□□□□□ -0.59
UBE2D3-222ENST00000508238 QRICH2Q9H0J4 1663 aa11.34□□□□□ -0.59
UBE2D3-222ENST00000508238 BTG4Q9NY30 223 aa11.34□□□□□ -0.59
UBE2D3-222ENST00000508238 CABP1Q9NZU7 370 aa11.34□□□□□ -0.59
UBE2D3-222ENST00000508238 PPIP5K1Q6PFW1 1433 aa11.34□□□□□ -0.59
UBE2D3-222ENST00000508238 COL14A1Q05707 1796 aaKnown RBP11.33□□□□□ -0.59
UBE2D3-222ENST00000508238 SBNO2Q9Y2G9 1366 aa11.33□□□□□ -0.6
UBE2D3-222ENST00000508238 ABTB2Q8N961 1025 aa11.33□□□□□ -0.6
UBE2D3-222ENST00000508238 PRDM11Q9NQV5 511 aa11.33□□□□□ -0.6
UBE2D3-222ENST00000508238 TONSLQ96HA7 1378 aa11.32□□□□□ -0.6
UBE2D3-222ENST00000508238 NLRP13Q86W25 1043 aa11.32□□□□□ -0.6
UBE2D3-222ENST00000508238 SEPT12Q8IYM1 358 aa11.32□□□□□ -0.6
UBE2D3-222ENST00000508238 USP19O94966 1318 aa11.32□□□□□ -0.6
UBE2D3-222ENST00000508238 SPATA31A5Q5VU36 1347 aa11.32□□□□□ -0.6
UBE2D3-222ENST00000508238 SPATA31A7Q8IWB4 1347 aa11.32□□□□□ -0.6
UBE2D3-222ENST00000508238 CPDO75976 1380 aa11.31□□□□□ -0.6
UBE2D3-222ENST00000508238 KIAA0232Q92628 1395 aa11.31□□□□□ -0.6
UBE2D3-222ENST00000508238 CARD11Q9BXL7 1154 aa11.31□□□□□ -0.6
UBE2D3-222ENST00000508238 SSH2Q76I76 1423 aa11.31□□□□□ -0.6
UBE2D3-222ENST00000508238 NRAPQ86VF7 1730 aa11.3□□□□□ -0.6
UBE2D3-222ENST00000508238 USP6P35125 1406 aa11.3□□□□□ -0.6
UBE2D3-222ENST00000508238 NUTM2GQ5VZR2 741 aa11.3□□□□□ -0.6
UBE2D3-222ENST00000508238 CCDC9Q9Y3X0 531 aaKnown RBP11.3□□□□□ -0.6
UBE2D3-222ENST00000508238 BRWD3Q6RI45 1802 aa11.3□□□□□ -0.6
UBE2D3-222ENST00000508238 GTPBP6O43824 516 aaPredicted RBP11.29□□□□□ -0.6
UBE2D3-222ENST00000508238 GCP02774 474 aa11.29□□□□□ -0.6
UBE2D3-222ENST00000508238 POTEIP0CG38 1075 aa11.29□□□□□ -0.6
UBE2D3-222ENST00000508238 ZC3H6P61129 1189 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-222ENST00000508238 PUS7Q96PZ0 661 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-222ENST00000508238 TRPC6Q9Y210 931 aa11.29□□□□□ -0.6
UBE2D3-222ENST00000508238 CLCN6P51797 869 aa11.28□□□□□ -0.6
UBE2D3-222ENST00000508238 CHRNA2Q15822 529 aa11.28□□□□□ -0.6
UBE2D3-222ENST00000508238 KRT27Q7Z3Y8 459 aa11.28□□□□□ -0.6
UBE2D3-222ENST00000508238 SPATA31A1Q5TZJ5 1347 aa11.28□□□□□ -0.6
UBE2D3-222ENST00000508238 PHRF1Q9P1Y6 1649 aaKnown RBP11.27□□□□□ -0.6
UBE2D3-222ENST00000508238 CPSF1Q10570 1443 aaKnown RBP11.27□□□□□ -0.6
UBE2D3-222ENST00000508238 NLRP6P59044 892 aa11.27□□□□□ -0.61
UBE2D3-222ENST00000508238 FAM98CQ17RN3 349 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-222ENST00000508238 BLMP54132 1417 aaPredicted RBP11.26□□□□□ -0.61
UBE2D3-222ENST00000508238 GALR2O43603 387 aaPredicted RBP11.26□□□□□ -0.61
UBE2D3-222ENST00000508238 TMEM106CQ9BVX2 250 aa11.26□□□□□ -0.61
UBE2D3-222ENST00000508238 TIMELESSQ9UNS1 1208 aa11.26□□□□□ -0.61
UBE2D3-222ENST00000508238 TTC21BQ7Z4L5 1316 aa11.26□□□□□ -0.61
UBE2D3-222ENST00000508238 TTC21AQ8NDW8 1320 aa11.26□□□□□ -0.61
UBE2D3-222ENST00000508238 NRKQ7Z2Y5 1582 aa11.25□□□□□ -0.61
UBE2D3-222ENST00000508238 CAMTA1Q9Y6Y1 1673 aa11.25□□□□□ -0.61
UBE2D3-222ENST00000508238 EVA1CP58658 441 aa11.25□□□□□ -0.61
UBE2D3-222ENST00000508238 BARGINQ6ZT62 677 aa11.25□□□□□ -0.61
UBE2D3-222ENST00000508238 AKAP12Q02952 1782 aa11.24□□□□□ -0.61
UBE2D3-222ENST00000508238 EFCAB3Q8N7B9 438 aa11.24□□□□□ -0.61
UBE2D3-222ENST00000508238 TESK2Q96S53 571 aa11.24□□□□□ -0.61
UBE2D3-222ENST00000508238 TSHZ2Q9NRE2 1034 aa11.24□□□□□ -0.61
UBE2D3-222ENST00000508238 STRN4Q9NRL3 753 aa11.24□□□□□ -0.61
UBE2D3-222ENST00000508238 CLSPNQ9HAW4 1339 aa11.24□□□□□ -0.61
UBE2D3-222ENST00000508238 AATKQ6ZMQ8 1374 aa11.24□□□□□ -0.61
UBE2D3-222ENST00000508238 SLIT3O75094 1523 aa11.24□□□□□ -0.61
UBE2D3-222ENST00000508238 LMO7Q8WWI1 1683 aa11.24□□□□□ -0.61
UBE2D3-222ENST00000508238 KCNH5Q8NCM2 988 aa11.23□□□□□ -0.61
UBE2D3-222ENST00000508238 THRAP3Q9Y2W1 955 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-222ENST00000508238 KTN1Q86UP2 1357 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-222ENST00000508238 SRCAPQ6ZRS2 3230 aa11.23□□□□□ -0.61
UBE2D3-222ENST00000508238 THSD7AQ9UPZ6 1657 aa11.23□□□□□ -0.61
UBE2D3-222ENST00000508238 ST20-MTHFSA0A0A6YYL1 179 aa11.22□□□□□ -0.61
UBE2D3-222ENST00000508238 A0A0G2JS52 829 aa11.22□□□□□ -0.61
UBE2D3-222ENST00000508238 PIK3C2AO00443 1686 aa11.22□□□□□ -0.61
UBE2D3-222ENST00000508238 MYT1Q01538 1121 aa11.22□□□□□ -0.61
UBE2D3-222ENST00000508238 LARP1Q6PKG0 1096 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-222ENST00000508238 ARHGEF25Q86VW2 580 aa11.22□□□□□ -0.61
UBE2D3-222ENST00000508238 TCP11L2Q8N4U5 519 aa11.22□□□□□ -0.61
UBE2D3-222ENST00000508238 DCBLD2Q96PD2 775 aa11.22□□□□□ -0.61
UBE2D3-222ENST00000508238 RYDENQ9NUL5 291 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms