RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 TBC1D2Q9BYX2 928 aa7.69□□□□□ -1.18
KDM3B-204ENST00000507996 ZHX1Q9UKY1 873 aaPredicted RBP7.69□□□□□ -1.18
KDM3B-204ENST00000507996 NPHP4O75161 1426 aaPredicted RBP7.69□□□□□ -1.18
KDM3B-204ENST00000507996 ZNF142P52746 1687 aaPredicted RBP7.68□□□□□ -1.18
KDM3B-204ENST00000507996 SBNO2Q9Y2G9 1366 aa7.68□□□□□ -1.18
KDM3B-204ENST00000507996 WASLO00401 505 aaPredicted RBP7.68□□□□□ -1.18
KDM3B-204ENST00000507996 CSPP1Q1MSJ5 1256 aa7.68□□□□□ -1.18
KDM3B-204ENST00000507996 SKOR2Q2VWA4 1001 aaPredicted RBP7.68□□□□□ -1.18
KDM3B-204ENST00000507996 SETD1AO15047 1707 aaKnown RBP7.68□□□□□ -1.18
KDM3B-204ENST00000507996 NINLQ9Y2I6 1382 aa7.68□□□□□ -1.18
KDM3B-204ENST00000507996 SLC20A2Q08357 652 aa7.68□□□□□ -1.18
KDM3B-204ENST00000507996 ZNF692Q9BU19 519 aaPredicted RBP7.68□□□□□ -1.18
KDM3B-204ENST00000507996 DCAF8L1A6NGE4 600 aa7.68□□□□□ -1.18
KDM3B-204ENST00000507996 NLRP13Q86W25 1043 aa7.68□□□□□ -1.18
KDM3B-204ENST00000507996 CARD14Q9BXL6 1004 aa7.68□□□□□ -1.18
KDM3B-204ENST00000507996 TULP4Q9NRJ4 1543 aa7.68□□□□□ -1.18
KDM3B-204ENST00000507996 UQCRHLA0A096LP55 91 aa7.67□□□□□ -1.18
KDM3B-204ENST00000507996 UQCRHP07919 91 aa7.67□□□□□ -1.18
KDM3B-204ENST00000507996 SLKQ9H2G2 1235 aaPredicted RBP7.67□□□□□ -1.18
KDM3B-204ENST00000507996 NOL7Q9UMY1 257 aaKnown RBP7.67□□□□□ -1.18
KDM3B-204ENST00000507996 PLIN1O60240 522 aa7.67□□□□□ -1.18
KDM3B-204ENST00000507996 CHRM1P11229 460 aaPredicted RBP7.67□□□□□ -1.18
KDM3B-204ENST00000507996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.67□□□□□ -1.18
KDM3B-204ENST00000507996 NUDT16Q96DE0 195 aaKnown RBP7.67□□□□□ -1.18
KDM3B-204ENST00000507996 CHMP4BQ9H444 224 aaKnown RBP7.67□□□□□ -1.18
KDM3B-204ENST00000507996 FAM13BQ9NYF5 915 aa7.67□□□□□ -1.18
KDM3B-204ENST00000507996 C20orf194Q5TEA3 1177 aa7.66□□□□□ -1.18
KDM3B-204ENST00000507996 SASS6Q6UVJ0 657 aa7.66□□□□□ -1.18
KDM3B-204ENST00000507996 PROSER2Q86WR7 435 aaPredicted RBP7.66□□□□□ -1.18
KDM3B-204ENST00000507996 PMFBP1Q8TBY8 1022 aa7.66□□□□□ -1.18
KDM3B-204ENST00000507996 MED14O60244 1454 aa7.66□□□□□ -1.18
KDM3B-204ENST00000507996 MSNP26038 577 aaKnown RBP7.66□□□□□ -1.18
KDM3B-204ENST00000507996 HDGFL2Q7Z4V5 671 aaPredicted RBP7.66□□□□□ -1.18
KDM3B-204ENST00000507996 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.66□□□□□ -1.18
KDM3B-204ENST00000507996 LMTK3Q96Q04 1460 aa7.65□□□□□ -1.18
KDM3B-204ENST00000507996 GAS2L3Q86XJ1 694 aa7.65□□□□□ -1.18
KDM3B-204ENST00000507996 PDLIM2Q96JY6 352 aa7.65□□□□□ -1.18
KDM3B-204ENST00000507996 TERF2IPQ9NYB0 399 aa7.65□□□□□ -1.18
KDM3B-204ENST00000507996 CIZ1Q9ULV3 898 aaPredicted RBP7.65□□□□□ -1.18
KDM3B-204ENST00000507996 ATAD2Q6PL18 1390 aa7.65□□□□□ -1.18
KDM3B-204ENST00000507996 NSD3Q9BZ95 1437 aa7.65□□□□□ -1.18
KDM3B-204ENST00000507996 FTSJ3Q8IY81 847 aaKnown RBP7.65□□□□□ -1.18
KDM3B-204ENST00000507996 SIRT1Q96EB6 747 aa7.65□□□□□ -1.18
KDM3B-204ENST00000507996 CDCA7LQ96GN5 454 aa7.65□□□□□ -1.18
KDM3B-204ENST00000507996 FAM135BQ49AJ0 1406 aa7.65□□□□□ -1.19
KDM3B-204ENST00000507996 DLC1Q96QB1 1528 aa7.65□□□□□ -1.19
KDM3B-204ENST00000507996 SEC24BO95487 1268 aa7.65□□□□□ -1.19
KDM3B-204ENST00000507996 GTF2F1P35269 517 aaKnown RBP eCLIP7.65□□□□□ -1.19
KDM3B-204ENST00000507996 CCDC61Q9Y6R9 512 aa7.65□□□□□ -1.19
KDM3B-204ENST00000507996 ZNF521Q96K83 1311 aa7.65□□□□□ -1.19
KDM3B-204ENST00000507996 HSP90AB1P08238 724 aaKnown RBP7.64□□□□□ -1.19
KDM3B-204ENST00000507996 CLEC17AQ6ZS10 378 aa7.64□□□□□ -1.19
KDM3B-204ENST00000507996 GZF1Q9H116 711 aaPredicted RBP7.64□□□□□ -1.19
KDM3B-204ENST00000507996 GGNBP2Q9H3C7 697 aa7.64□□□□□ -1.19
KDM3B-204ENST00000507996 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.64□□□□□ -1.19
KDM3B-204ENST00000507996 TECPR2O15040 1411 aa7.64□□□□□ -1.19
KDM3B-204ENST00000507996 RBM25P49756 843 aaKnown RBP7.64□□□□□ -1.19
KDM3B-204ENST00000507996 MORC1Q86VD1 984 aa7.64□□□□□ -1.19
KDM3B-204ENST00000507996 R3HCC1Q9Y3T6 440 aaKnown RBP7.64□□□□□ -1.19
KDM3B-204ENST00000507996 A0A1W2PP64 1363 aa7.64□□□□□ -1.19
KDM3B-204ENST00000507996 MYOM1P52179 1685 aa7.64□□□□□ -1.19
KDM3B-204ENST00000507996 UPF2Q9HAU5 1272 aaKnown RBP7.63□□□□□ -1.19
KDM3B-204ENST00000507996 PRR36Q9H6K5 1346 aa7.63□□□□□ -1.19
KDM3B-204ENST00000507996 PPIP5K1Q6PFW1 1433 aa7.63□□□□□ -1.19
KDM3B-204ENST00000507996 CPS1P31327 1500 aa7.63□□□□□ -1.19
KDM3B-204ENST00000507996 TEX2Q8IWB9 1127 aa7.63□□□□□ -1.19
KDM3B-204ENST00000507996 NGDNQ8NEJ9 315 aaKnown RBP7.63□□□□□ -1.19
KDM3B-204ENST00000507996 ZNF830Q96NB3 372 aaPredicted RBP7.63□□□□□ -1.19
KDM3B-204ENST00000507996 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.63□□□□□ -1.19
KDM3B-204ENST00000507996 DIP2AQ14689 1571 aa7.63□□□□□ -1.19
KDM3B-204ENST00000507996 ANKRD36BQ8N2N9 1353 aa7.63□□□□□ -1.19
KDM3B-204ENST00000507996 PIK3R4Q99570 1358 aa7.63□□□□□ -1.19
KDM3B-204ENST00000507996 CGNL1Q0VF96 1302 aa7.62□□□□□ -1.19
KDM3B-204ENST00000507996 ANP32BQ92688 251 aaKnown RBP7.62□□□□□ -1.19
KDM3B-204ENST00000507996 PUS7Q96PZ0 661 aaKnown RBP7.62□□□□□ -1.19
KDM3B-204ENST00000507996 NASPP49321 788 aaPredicted RBP7.62□□□□□ -1.19
KDM3B-204ENST00000507996 DUSP27Q5VZP5 1158 aa7.62□□□□□ -1.19
KDM3B-204ENST00000507996 PRDM10Q9NQV6 1147 aa7.62□□□□□ -1.19
KDM3B-204ENST00000507996 STRCQ7RTU9 1775 aa7.62□□□□□ -1.19
KDM3B-204ENST00000507996 KNDC1Q76NI1 1749 aa7.62□□□□□ -1.19
KDM3B-204ENST00000507996 SOX12O15370 315 aa7.62□□□□□ -1.19
KDM3B-204ENST00000507996 ZNF445P59923 1031 aa7.62□□□□□ -1.19
KDM3B-204ENST00000507996 ESCO1Q5FWF5 840 aa7.62□□□□□ -1.19
KDM3B-204ENST00000507996 TRMT2AQ8IZ69 625 aaKnown RBP7.62□□□□□ -1.19
KDM3B-204ENST00000507996 MYRIPQ8NFW9 859 aa7.62□□□□□ -1.19
KDM3B-204ENST00000507996 ZKSCAN5Q9Y2L8 839 aa7.62□□□□□ -1.19
KDM3B-204ENST00000507996 ACEP12821 1306 aa7.61□□□□□ -1.19
KDM3B-204ENST00000507996 PTCH1Q13635 1447 aa7.61□□□□□ -1.19
KDM3B-204ENST00000507996 FBLN1P23142 703 aa7.61□□□□□ -1.19
KDM3B-204ENST00000507996 PPP2R1AP30153 589 aa7.61□□□□□ -1.19
KDM3B-204ENST00000507996 SMC5Q8IY18 1101 aa7.61□□□□□ -1.19
KDM3B-204ENST00000507996 SNX21Q969T3 373 aa7.61□□□□□ -1.19
KDM3B-204ENST00000507996 ZNF335Q9H4Z2 1342 aaPredicted RBP7.6□□□□□ -1.19
KDM3B-204ENST00000507996 RAB3GAP1Q15042 981 aa7.6□□□□□ -1.19
KDM3B-204ENST00000507996 PRIMPOLQ96LW4 560 aa7.6□□□□□ -1.19
KDM3B-204ENST00000507996 GBP4Q96PP9 640 aa7.6□□□□□ -1.19
KDM3B-204ENST00000507996 ZRANB1Q9UGI0 708 aa7.6□□□□□ -1.19
KDM3B-204ENST00000507996 CHD2O14647 1828 aaKnown RBP7.6□□□□□ -1.19
KDM3B-204ENST00000507996 NKTRP30414 1462 aaKnown RBP7.6□□□□□ -1.19
KDM3B-204ENST00000507996 NUTM2GQ5VZR2 741 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms