RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 RTL1A6NKG5 1358 aa21.67■■□□□ 1.06
DDX41-207ENST00000507900 ATF3P18847 181 aa21.67■■□□□ 1.06
DDX41-207ENST00000507900 TRIM35Q9UPQ4 493 aa21.67■■□□□ 1.06
DDX41-207ENST00000507900 ALS2Q96Q42 1657 aa21.67■■□□□ 1.06
DDX41-207ENST00000507900 IL16Q14005 1332 aa21.66■■□□□ 1.06
DDX41-207ENST00000507900 PAK3O75914 559 aaPredicted RBP21.66■■□□□ 1.06
DDX41-207ENST00000507900 NEFMP07197 916 aa21.66■■□□□ 1.06
DDX41-207ENST00000507900 DLG5Q8TDM6 1919 aa21.66■■□□□ 1.06
DDX41-207ENST00000507900 ARHGEF10O15013 1369 aa21.66■■□□□ 1.06
DDX41-207ENST00000507900 HSP90AB2PQ58FF8 381 aa21.65■■□□□ 1.06
DDX41-207ENST00000507900 MSH6P52701 1360 aa21.65■■□□□ 1.06
DDX41-207ENST00000507900 HMOX1P09601 288 aa21.65■■□□□ 1.06
DDX41-207ENST00000507900 CADPS2Q86UW7 1296 aa21.65■■□□□ 1.06
DDX41-207ENST00000507900 NFE2L2Q16236 605 aa21.64■■□□□ 1.05
DDX41-207ENST00000507900 RIPK4P57078 832 aa21.63■■□□□ 1.05
DDX41-207ENST00000507900 MYH16Q9H6N6 1097 aa21.63■■□□□ 1.05
DDX41-207ENST00000507900 SOX12O15370 315 aa21.62■■□□□ 1.05
DDX41-207ENST00000507900 FOXO3O43524 673 aa21.62■■□□□ 1.05
DDX41-207ENST00000507900 AMPHP49418 695 aa21.61■■□□□ 1.05
DDX41-207ENST00000507900 NUTM2GQ5VZR2 741 aa21.61■■□□□ 1.05
DDX41-207ENST00000507900 PHACTR3Q96KR7 559 aa21.61■■□□□ 1.05
DDX41-207ENST00000507900 KDRP35968 1356 aa21.61■■□□□ 1.05
DDX41-207ENST00000507900 KCNH5Q8NCM2 988 aa21.61■■□□□ 1.05
DDX41-207ENST00000507900 USP19O94966 1318 aa21.6■■□□□ 1.05
DDX41-207ENST00000507900 HOXC9P31274 260 aa21.6■■□□□ 1.05
DDX41-207ENST00000507900 KRT28Q7Z3Y7 464 aa21.59■■□□□ 1.05
DDX41-207ENST00000507900 IGSF1Q8N6C5 1336 aa21.59■■□□□ 1.05
DDX41-207ENST00000507900 PELP1Q8IZL8 1130 aaKnown RBP21.58■■□□□ 1.05
DDX41-207ENST00000507900 SULT6B1Q6IMI4 303 aa21.57■■□□□ 1.04
DDX41-207ENST00000507900 ZNF335Q9H4Z2 1342 aaPredicted RBP21.57■■□□□ 1.04
DDX41-207ENST00000507900 CT47B1P0C2W7 299 aaPredicted RBP21.57■■□□□ 1.04
DDX41-207ENST00000507900 LMOD3Q0VAK6 560 aa21.57■■□□□ 1.04
DDX41-207ENST00000507900 AEBP1Q8IUX7 1158 aa21.57■■□□□ 1.04
DDX41-207ENST00000507900 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.56■■□□□ 1.04
DDX41-207ENST00000507900 FANCIQ9NVI1 1328 aa21.55■■□□□ 1.04
DDX41-207ENST00000507900 PXDNQ92626 1479 aa21.55■■□□□ 1.04
DDX41-207ENST00000507900 CALD1Q05682 793 aaKnown RBP21.55■■□□□ 1.04
DDX41-207ENST00000507900 NPHP3Q7Z494 1330 aa21.55■■□□□ 1.04
DDX41-207ENST00000507900 IP6K1Q92551 441 aa21.54■■□□□ 1.04
DDX41-207ENST00000507900 CRYBG1Q9Y4K1 1723 aa21.53■■□□□ 1.04
DDX41-207ENST00000507900 MED1Q15648 1581 aaPredicted RBP21.53■■□□□ 1.04
DDX41-207ENST00000507900 XPCQ01831 940 aaPredicted RBP21.53■■□□□ 1.04
DDX41-207ENST00000507900 EYA1Q99502 592 aa21.53■■□□□ 1.04
DDX41-207ENST00000507900 PLIN1O60240 522 aa21.52■■□□□ 1.04
DDX41-207ENST00000507900 TNS3Q68CZ2 1445 aa21.51■■□□□ 1.03
DDX41-207ENST00000507900 GCP02774 474 aa21.51■■□□□ 1.03
DDX41-207ENST00000507900 CAMTA1Q9Y6Y1 1673 aa21.5■■□□□ 1.03
DDX41-207ENST00000507900 RARSP54136 660 aaKnown RBP21.49■■□□□ 1.03
DDX41-207ENST00000507900 ARHGEF25Q86VW2 580 aa21.49■■□□□ 1.03
DDX41-207ENST00000507900 EXOC6Q8TAG9 804 aa21.49■■□□□ 1.03
DDX41-207ENST00000507900 TSR2Q969E8 191 aaKnown RBP21.48■■□□□ 1.03
DDX41-207ENST00000507900 IFT57Q9NWB7 429 aa21.48■■□□□ 1.03
DDX41-207ENST00000507900 BCAR3O75815 825 aa21.48■■□□□ 1.03
DDX41-207ENST00000507900 B4GALNT3Q6L9W6 998 aa21.48■■□□□ 1.03
DDX41-207ENST00000507900 ABCC6O95255 1503 aa21.48■■□□□ 1.03
DDX41-207ENST00000507900 ZNF853P0CG23 659 aa21.47■■□□□ 1.03
DDX41-207ENST00000507900 NCAPD2Q15021 1401 aa21.47■■□□□ 1.03
DDX41-207ENST00000507900 RGPD2P0DJD1 1756 aa21.46■■□□□ 1.03
DDX41-207ENST00000507900 GNAI1P63096 354 aa21.46■■□□□ 1.03
DDX41-207ENST00000507900 BRINP3Q76B58 766 aa21.46■■□□□ 1.03
DDX41-207ENST00000507900 EXOSC9Q06265 439 aaKnown RBP21.45■■□□□ 1.02
DDX41-207ENST00000507900 C20orf194Q5TEA3 1177 aa21.45■■□□□ 1.02
DDX41-207ENST00000507900 CRBNQ96SW2 442 aa21.45■■□□□ 1.02
DDX41-207ENST00000507900 LRRC37A3O60309 1634 aa21.45■■□□□ 1.02
DDX41-207ENST00000507900 NHSL1Q5SYE7 1610 aa21.45■■□□□ 1.02
DDX41-207ENST00000507900 SPATA31A3Q5VYP0 1347 aa21.45■■□□□ 1.02
DDX41-207ENST00000507900 PDE3AQ14432 1141 aa21.44■■□□□ 1.02
DDX41-207ENST00000507900 LMOD2Q6P5Q4 547 aa21.44■■□□□ 1.02
DDX41-207ENST00000507900 CCDC136Q96JN2 1154 aa21.44■■□□□ 1.02
DDX41-207ENST00000507900 COL18A1P39060 1754 aa21.43■■□□□ 1.02
DDX41-207ENST00000507900 GAS2L2Q8NHY3 880 aa21.43■■□□□ 1.02
DDX41-207ENST00000507900 CFAP44Q96MT7 982 aa21.43■■□□□ 1.02
DDX41-207ENST00000507900 THUMPD2Q9BTF0 503 aaKnown RBP21.43■■□□□ 1.02
DDX41-207ENST00000507900 SLAIN2Q9P270 581 aa21.43■■□□□ 1.02
DDX41-207ENST00000507900 RGPD5Q99666 1765 aa21.43■■□□□ 1.02
DDX41-207ENST00000507900 LMO7Q8WWI1 1683 aa21.43■■□□□ 1.02
DDX41-207ENST00000507900 DDX17Q92841 729 aaKnown RBP21.42■■□□□ 1.02
DDX41-207ENST00000507900 ZNF428Q96B54 188 aa21.42■■□□□ 1.02
DDX41-207ENST00000507900 MTHFSDQ2M296 383 aaKnown RBP21.41■■□□□ 1.02
DDX41-207ENST00000507900 SOS2Q07890 1332 aaPredicted RBP21.41■■□□□ 1.02
DDX41-207ENST00000507900 FAM83GA6ND36 823 aa21.4■■□□□ 1.02
DDX41-207ENST00000507900 FAM208AQ9UK61 1670 aaKnown RBP21.4■■□□□ 1.02
DDX41-207ENST00000507900 HTATSF1O43719 755 aaKnown RBP21.4■■□□□ 1.02
DDX41-207ENST00000507900 LTV1Q96GA3 475 aaPredicted RBP21.4■■□□□ 1.02
DDX41-207ENST00000507900 CRB1P82279 1406 aa21.39■■□□□ 1.01
DDX41-207ENST00000507900 MBIPQ9NS73 344 aa21.39■■□□□ 1.01
DDX41-207ENST00000507900 NBPF6Q5VWK0 638 aa21.38■■□□□ 1.01
DDX41-207ENST00000507900 NBPF4Q96M43 638 aa21.38■■□□□ 1.01
DDX41-207ENST00000507900 ABCA3Q99758 1704 aa21.37■■□□□ 1.01
DDX41-207ENST00000507900 DCTN1Q14203 1278 aa21.37■■□□□ 1.01
DDX41-207ENST00000507900 ALDH1L2Q3SY69 923 aa21.37■■□□□ 1.01
DDX41-207ENST00000507900 CPDO75976 1380 aa21.37■■□□□ 1.01
DDX41-207ENST00000507900 LTBP4Q8N2S1 1624 aa21.36■■□□□ 1.01
DDX41-207ENST00000507900 BRPF1P55201 1214 aaPredicted RBP21.36■■□□□ 1.01
DDX41-207ENST00000507900 LAS1LQ9Y4W2 734 aaKnown RBP21.36■■□□□ 1.01
DDX41-207ENST00000507900 CHL1O00533 1208 aa21.35■■□□□ 1.01
DDX41-207ENST00000507900 CANXP27824 592 aaKnown RBP21.35■■□□□ 1.01
DDX41-207ENST00000507900 MAP3K5Q99683 1374 aa21.34■■□□□ 1.01
DDX41-207ENST00000507900 ZBTB7CA1YPR0 619 aa21.34■■□□□ 1.01
DDX41-207ENST00000507900 MCM10Q7L590 875 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms