RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 FAM135BQ49AJ0 1406 aa22■■□□□ 1.11
NUP54-205ENST00000507257 ASXL2Q76L83 1435 aa22■■□□□ 1.11
NUP54-205ENST00000507257 CYP2E1P05181 493 aaPredicted RBP22■■□□□ 1.11
NUP54-205ENST00000507257 KIAA1211Q6ZU35 1233 aa22■■□□□ 1.11
NUP54-205ENST00000507257 LRRC7Q96NW7 1537 aa22■■□□□ 1.11
NUP54-205ENST00000507257 YEATS2Q9ULM3 1422 aa21.99■■□□□ 1.11
NUP54-205ENST00000507257 ABCC3O15438 1527 aa21.99■■□□□ 1.11
NUP54-205ENST00000507257 DIAPH1O60610 1272 aaKnown RBP21.99■■□□□ 1.11
NUP54-205ENST00000507257 VGFO15240 615 aaPredicted RBP21.98■■□□□ 1.11
NUP54-205ENST00000507257 CHGAP10645 457 aaKnown RBP21.98■■□□□ 1.11
NUP54-205ENST00000507257 ABCC4O15439 1325 aa21.98■■□□□ 1.11
NUP54-205ENST00000507257 KIF20BQ96Q89 1820 aa21.98■■□□□ 1.11
NUP54-205ENST00000507257 CALD1Q05682 793 aaKnown RBP21.98■■□□□ 1.11
NUP54-205ENST00000507257 MRPL50Q8N5N7 158 aaKnown RBP21.98■■□□□ 1.11
NUP54-205ENST00000507257 PDLIM2Q96JY6 352 aa21.98■■□□□ 1.11
NUP54-205ENST00000507257 CD163L1Q9NR16 1453 aa21.97■■□□□ 1.11
NUP54-205ENST00000507257 MSNP26038 577 aaKnown RBP21.97■■□□□ 1.11
NUP54-205ENST00000507257 CWC22Q9HCG8 908 aaKnown RBP21.96■■□□□ 1.11
NUP54-205ENST00000507257 TERF2IPQ9NYB0 399 aa21.96■■□□□ 1.11
NUP54-205ENST00000507257 FYB1O15117 783 aa21.96■■□□□ 1.11
NUP54-205ENST00000507257 ZNF500O60304 480 aaPredicted RBP21.96■■□□□ 1.11
NUP54-205ENST00000507257 CABP2Q9NPB3 220 aa21.96■■□□□ 1.11
NUP54-205ENST00000507257 MAP7D2Q96T17 732 aa21.95■■□□□ 1.1
NUP54-205ENST00000507257 VAMP4O75379 141 aa21.94■■□□□ 1.1
NUP54-205ENST00000507257 NOL7Q9UMY1 257 aaKnown RBP21.94■■□□□ 1.1
NUP54-205ENST00000507257 MLH3Q9UHC1 1453 aa21.94■■□□□ 1.1
NUP54-205ENST00000507257 SIRT2Q8IXJ6 389 aa21.94■■□□□ 1.1
NUP54-205ENST00000507257 RBM42Q9BTD8 480 aaKnown RBP21.93■■□□□ 1.1
NUP54-205ENST00000507257 GGNBP2Q9H3C7 697 aa21.93■■□□□ 1.1
NUP54-205ENST00000507257 MCM5P33992 734 aa21.92■■□□□ 1.1
NUP54-205ENST00000507257 LMBRD1Q9NUN5 540 aa21.92■■□□□ 1.1
NUP54-205ENST00000507257 CFAP65Q6ZU64 1925 aaKnown RBP21.92■■□□□ 1.1
NUP54-205ENST00000507257 SIGLEC1Q9BZZ2 1709 aa21.92■■□□□ 1.1
NUP54-205ENST00000507257 PTPRMP28827 1452 aa21.91■■□□□ 1.1
NUP54-205ENST00000507257 ZSCAN23Q3MJ62 389 aa21.91■■□□□ 1.1
NUP54-205ENST00000507257 IFT57Q9NWB7 429 aa21.91■■□□□ 1.1
NUP54-205ENST00000507257 FOXD4L1Q9NU39 408 aa21.9■■□□□ 1.1
NUP54-205ENST00000507257 GSPT1P15170 499 aaKnown RBP21.9■■□□□ 1.1
NUP54-205ENST00000507257 GNAI1P63096 354 aa21.9■■□□□ 1.1
NUP54-205ENST00000507257 PLEKHM2Q8IWE5 1019 aa21.89■■□□□ 1.09
NUP54-205ENST00000507257 API5Q9BZZ5 524 aaKnown RBP21.89■■□□□ 1.09
NUP54-205ENST00000507257 AK9Q5TCS8 1911 aa21.89■■□□□ 1.09
NUP54-205ENST00000507257 ZNF853P0CG23 659 aa21.88■■□□□ 1.09
NUP54-205ENST00000507257 NFE2L2Q16236 605 aa21.88■■□□□ 1.09
NUP54-205ENST00000507257 USP26Q9BXU7 913 aa21.88■■□□□ 1.09
NUP54-205ENST00000507257 DCTPP1Q9H773 170 aa21.88■■□□□ 1.09
NUP54-205ENST00000507257 KNDC1Q76NI1 1749 aa21.88■■□□□ 1.09
NUP54-205ENST00000507257 TTC22Q5TAA0 569 aa21.88■■□□□ 1.09
NUP54-205ENST00000507257 MCTP1Q6DN14 999 aa21.87■■□□□ 1.09
NUP54-205ENST00000507257 CSPP1Q1MSJ5 1256 aa21.86■■□□□ 1.09
NUP54-205ENST00000507257 INTS3Q68E01 1043 aaKnown RBP21.86■■□□□ 1.09
NUP54-205ENST00000507257 POGZQ7Z3K3 1410 aa21.86■■□□□ 1.09
NUP54-205ENST00000507257 SRPK2P78362 688 aaKnown RBP21.86■■□□□ 1.09
NUP54-205ENST00000507257 CAVIN1Q6NZI2 390 aaKnown RBP21.85■■□□□ 1.09
NUP54-205ENST00000507257 MTERF4Q7Z6M4 381 aaKnown RBP21.85■■□□□ 1.09
NUP54-205ENST00000507257 PRKAR2BP31323 418 aa21.84■■□□□ 1.09
NUP54-205ENST00000507257 HDGFL2Q7Z4V5 671 aaPredicted RBP21.84■■□□□ 1.09
NUP54-205ENST00000507257 C1orf115Q9H7X2 142 aa21.84■■□□□ 1.09
NUP54-205ENST00000507257 ST18O60284 1047 aa21.84■■□□□ 1.09
NUP54-205ENST00000507257 RBSNQ9H1K0 784 aa21.84■■□□□ 1.09
NUP54-205ENST00000507257 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.84■■□□□ 1.09
NUP54-205ENST00000507257 ZKSCAN5Q9Y2L8 839 aa21.84■■□□□ 1.09
NUP54-205ENST00000507257 LRSAM1Q6UWE0 723 aa21.82■■□□□ 1.08
NUP54-205ENST00000507257 ARHGEF40Q8TER5 1519 aa21.81■■□□□ 1.08
NUP54-205ENST00000507257 LMOD3Q0VAK6 560 aa21.81■■□□□ 1.08
NUP54-205ENST00000507257 CPSF1Q10570 1443 aaKnown RBP21.81■■□□□ 1.08
NUP54-205ENST00000507257 ATP7BP35670 1465 aa21.81■■□□□ 1.08
NUP54-205ENST00000507257 CASC1Q6TDU7 716 aa21.8■■□□□ 1.08
NUP54-205ENST00000507257 TSPYL6Q8N831 410 aa21.8■■□□□ 1.08
NUP54-205ENST00000507257 YTHDC2Q9H6S0 1430 aaKnown RBP21.8■■□□□ 1.08
NUP54-205ENST00000507257 ATP10DQ9P241 1426 aa21.8■■□□□ 1.08
NUP54-205ENST00000507257 MBD3O95983 291 aa21.79■■□□□ 1.08
NUP54-205ENST00000507257 PRIM1P49642 420 aaKnown RBP21.79■■□□□ 1.08
NUP54-205ENST00000507257 TWISTNBQ3B726 338 aaPredicted RBP21.79■■□□□ 1.08
NUP54-205ENST00000507257 RPAP2Q8IXW5 612 aaPredicted RBP21.79■■□□□ 1.08
NUP54-205ENST00000507257 ANKRD44Q8N8A2 993 aa21.79■■□□□ 1.08
NUP54-205ENST00000507257 CCDC39Q9UFE4 941 aa21.79■■□□□ 1.08
NUP54-205ENST00000507257 DLG5Q8TDM6 1919 aa21.79■■□□□ 1.08
NUP54-205ENST00000507257 MAP2P11137 1827 aaKnown RBP21.79■■□□□ 1.08
NUP54-205ENST00000507257 CDK12Q9NYV4 1490 aaPredicted RBP21.78■■□□□ 1.08
NUP54-205ENST00000507257 DYNC1I1O14576 645 aa21.78■■□□□ 1.08
NUP54-205ENST00000507257 GPT2Q8TD30 523 aa21.78■■□□□ 1.08
NUP54-205ENST00000507257 MBIPQ9NS73 344 aa21.78■■□□□ 1.08
NUP54-205ENST00000507257 REC8O95072 547 aa21.78■■□□□ 1.08
NUP54-205ENST00000507257 POLKQ9UBT6 870 aa21.78■■□□□ 1.08
NUP54-205ENST00000507257 ZDHHC9Q9Y397 364 aa21.77■■□□□ 1.08
NUP54-205ENST00000507257 NCLP19338 710 aaKnown RBP21.76■■□□□ 1.07
NUP54-205ENST00000507257 HAP1P54257 671 aaPredicted RBP21.76■■□□□ 1.07
NUP54-205ENST00000507257 GGT6Q6P531 493 aa21.76■■□□□ 1.07
NUP54-205ENST00000507257 SLC52A1Q9NWF4 448 aa21.76■■□□□ 1.07
NUP54-205ENST00000507257 R3HCC1Q9Y3T6 440 aaKnown RBP21.76■■□□□ 1.07
NUP54-205ENST00000507257 MCM2P49736 904 aa21.75■■□□□ 1.07
NUP54-205ENST00000507257 PHACTR3Q96KR7 559 aa21.75■■□□□ 1.07
NUP54-205ENST00000507257 TMEM131LA2VDJ0 1609 aa21.75■■□□□ 1.07
NUP54-205ENST00000507257 PRPF40AO75400 957 aaKnown RBP21.74■■□□□ 1.07
NUP54-205ENST00000507257 PKP1Q13835 747 aa21.74■■□□□ 1.07
NUP54-205ENST00000507257 RIMS2Q9UQ26 1411 aa21.74■■□□□ 1.07
NUP54-205ENST00000507257 SDSP20132 328 aa21.73■■□□□ 1.07
NUP54-205ENST00000507257 AATKQ6ZMQ8 1374 aa21.73■■□□□ 1.07
NUP54-205ENST00000507257 MYO5BQ9ULV0 1848 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms