RNA–Protein interactions for RNA: ENST00000506862.1

LINC01411-202, Transcript of long intergenic non-protein coding RNA 1411, humanhuman

TSL 3 BASIC

Gene LINC01411, Length 744 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01411-202ENST00000506862 CDK12Q9NYV4 1490 aaPredicted RBP11.78□□□□□ -0.52
LINC01411-202ENST00000506862 U2AF1L5P0DN76 240 aaPredicted RBP11.78□□□□□ -0.52
LINC01411-202ENST00000506862 U2AF1Q01081 240 aaKnown RBP eCLIP11.78□□□□□ -0.52
LINC01411-202ENST00000506862 RUNDC1Q96C34 613 aa11.78□□□□□ -0.52
LINC01411-202ENST00000506862 EMILIN1Q9Y6C2 1016 aa11.78□□□□□ -0.52
LINC01411-202ENST00000506862 ARHGEF10O15013 1369 aa11.78□□□□□ -0.52
LINC01411-202ENST00000506862 USP54Q70EL1 1684 aa11.78□□□□□ -0.52
LINC01411-202ENST00000506862 TRPM3Q9HCF6 1732 aaPredicted RBP11.77□□□□□ -0.52
LINC01411-202ENST00000506862 U2SURPO15042 1029 aaKnown RBP11.77□□□□□ -0.53
LINC01411-202ENST00000506862 PLEKHG5O94827 1062 aa11.77□□□□□ -0.53
LINC01411-202ENST00000506862 SALL2Q9Y467 1007 aaPredicted RBP11.77□□□□□ -0.53
LINC01411-202ENST00000506862 SPATA31A3Q5VYP0 1347 aa11.77□□□□□ -0.53
LINC01411-202ENST00000506862 GCP02774 474 aa11.76□□□□□ -0.53
LINC01411-202ENST00000506862 SOS2Q07890 1332 aaPredicted RBP11.76□□□□□ -0.53
LINC01411-202ENST00000506862 MAPK8IP3Q9UPT6 1336 aa11.76□□□□□ -0.53
LINC01411-202ENST00000506862 PNPLA6Q8IY17 1366 aa11.76□□□□□ -0.53
LINC01411-202ENST00000506862 TNS3Q68CZ2 1445 aa11.76□□□□□ -0.53
LINC01411-202ENST00000506862 ZBTB7CA1YPR0 619 aa11.75□□□□□ -0.53
LINC01411-202ENST00000506862 UBAP1LF5GYI3 381 aa11.75□□□□□ -0.53
LINC01411-202ENST00000506862 HAP1P54257 671 aaPredicted RBP11.75□□□□□ -0.53
LINC01411-202ENST00000506862 CCDC146Q8IYE0 955 aa11.75□□□□□ -0.53
LINC01411-202ENST00000506862 CERKQ8TCT0 537 aa11.75□□□□□ -0.53
LINC01411-202ENST00000506862 MAP3K19Q56UN5 1328 aa11.75□□□□□ -0.53
LINC01411-202ENST00000506862 KIF24Q5T7B8 1368 aa11.75□□□□□ -0.53
LINC01411-202ENST00000506862 COL3A1P02461 1466 aaPredicted RBP11.75□□□□□ -0.53
LINC01411-202ENST00000506862 PXDNQ92626 1479 aa11.75□□□□□ -0.53
LINC01411-202ENST00000506862 APAF1O14727 1248 aa11.74□□□□□ -0.53
LINC01411-202ENST00000506862 PIP4K2BP78356 416 aa11.74□□□□□ -0.53
LINC01411-202ENST00000506862 LRRC59Q96AG4 307 aaKnown RBP11.74□□□□□ -0.53
LINC01411-202ENST00000506862 FLT4P35916 1363 aa11.74□□□□□ -0.53
LINC01411-202ENST00000506862 IQSEC2Q5JU85 1478 aa11.74□□□□□ -0.53
LINC01411-202ENST00000506862 ALS2Q96Q42 1657 aa11.74□□□□□ -0.53
LINC01411-202ENST00000506862 USP19O94966 1318 aa11.73□□□□□ -0.53
LINC01411-202ENST00000506862 GOLGA2Q08379 1002 aa11.73□□□□□ -0.53
LINC01411-202ENST00000506862 ROBO1Q9Y6N7 1651 aa11.72□□□□□ -0.53
LINC01411-202ENST00000506862 NHSL1Q5SYE7 1610 aa11.72□□□□□ -0.53
LINC01411-202ENST00000506862 HOXC9P31274 260 aa11.72□□□□□ -0.53
LINC01411-202ENST00000506862 IL13P35225 146 aa11.72□□□□□ -0.53
LINC01411-202ENST00000506862 HSP90AB2PQ58FF8 381 aa11.72□□□□□ -0.53
LINC01411-202ENST00000506862 IP6K1Q92551 441 aa11.72□□□□□ -0.53
LINC01411-202ENST00000506862 SUPT16HQ9Y5B9 1047 aaKnown RBP11.72□□□□□ -0.53
LINC01411-202ENST00000506862 MARF1Q9Y4F3 1742 aaKnown RBP11.72□□□□□ -0.53
LINC01411-202ENST00000506862 SLIT3O75094 1523 aa11.71□□□□□ -0.53
LINC01411-202ENST00000506862 RTL1A6NKG5 1358 aa11.71□□□□□ -0.53
LINC01411-202ENST00000506862 SENP3-EIF4A1A0A087X0R7 540 aa11.71□□□□□ -0.53
LINC01411-202ENST00000506862 FCHSD2O94868 740 aa11.71□□□□□ -0.53
LINC01411-202ENST00000506862 ZC3H6P61129 1189 aaKnown RBP11.71□□□□□ -0.53
LINC01411-202ENST00000506862 EIF4A2Q14240 407 aaKnown RBP11.71□□□□□ -0.53
LINC01411-202ENST00000506862 ARHGEF25Q86VW2 580 aa11.71□□□□□ -0.53
LINC01411-202ENST00000506862 LTN1O94822 1766 aa11.71□□□□□ -0.54
LINC01411-202ENST00000506862 TCP11L2Q8N4U5 519 aa11.7□□□□□ -0.54
LINC01411-202ENST00000506862 CABLES1Q8TDN4 633 aa11.7□□□□□ -0.54
LINC01411-202ENST00000506862 RBM42Q9BTD8 480 aaKnown RBP11.7□□□□□ -0.54
LINC01411-202ENST00000506862 E9PSI1 815 aa11.69□□□□□ -0.54
LINC01411-202ENST00000506862 FKBP8Q14318 412 aa11.69□□□□□ -0.54
LINC01411-202ENST00000506862 CCDC27Q2M243 656 aa11.69□□□□□ -0.54
LINC01411-202ENST00000506862 LTV1Q96GA3 475 aaPredicted RBP11.69□□□□□ -0.54
LINC01411-202ENST00000506862 NFAT5O94916 1531 aa11.69□□□□□ -0.54
LINC01411-202ENST00000506862 AHDC1Q5TGY3 1603 aaPredicted RBP11.68□□□□□ -0.54
LINC01411-202ENST00000506862 HMOX1P09601 288 aa11.68□□□□□ -0.54
LINC01411-202ENST00000506862 NEUROD2Q15784 382 aa11.68□□□□□ -0.54
LINC01411-202ENST00000506862 ERICH6BQ5W0A0 696 aa11.68□□□□□ -0.54
LINC01411-202ENST00000506862 PEAK1Q9H792 1746 aa11.68□□□□□ -0.54
LINC01411-202ENST00000506862 MED1Q15648 1581 aaPredicted RBP11.67□□□□□ -0.54
LINC01411-202ENST00000506862 PHLPP1O60346 1717 aa11.67□□□□□ -0.54
LINC01411-202ENST00000506862 SULT6B1Q6IMI4 303 aa11.67□□□□□ -0.54
LINC01411-202ENST00000506862 WDR63Q8IWG1 891 aa11.67□□□□□ -0.54
LINC01411-202ENST00000506862 PELP1Q8IZL8 1130 aaKnown RBP11.67□□□□□ -0.54
LINC01411-202ENST00000506862 ZNF521Q96K83 1311 aa11.66□□□□□ -0.54
LINC01411-202ENST00000506862 PRKAR2BP31323 418 aa11.66□□□□□ -0.54
LINC01411-202ENST00000506862 CALD1Q05682 793 aaKnown RBP11.66□□□□□ -0.54
LINC01411-202ENST00000506862 LMOD3Q0VAK6 560 aa11.66□□□□□ -0.54
LINC01411-202ENST00000506862 WWC1Q8IX03 1113 aa11.66□□□□□ -0.54
LINC01411-202ENST00000506862 RSPH6AQ9H0K4 717 aa11.66□□□□□ -0.54
LINC01411-202ENST00000506862 PRDM11Q9NQV5 511 aa11.66□□□□□ -0.54
LINC01411-202ENST00000506862 RCAN3Q9UKA8 241 aa11.66□□□□□ -0.54
LINC01411-202ENST00000506862 PHRF1Q9P1Y6 1649 aaKnown RBP11.66□□□□□ -0.54
LINC01411-202ENST00000506862 TMPOP42166 694 aaKnown RBP11.65□□□□□ -0.54
LINC01411-202ENST00000506862 SLFN5Q08AF3 891 aa11.65□□□□□ -0.54
LINC01411-202ENST00000506862 ANKRD24Q8TF21 1146 aa11.65□□□□□ -0.54
LINC01411-202ENST00000506862 CDCA7LQ96GN5 454 aa11.65□□□□□ -0.54
LINC01411-202ENST00000506862 PLEKHF1Q96S99 279 aa11.65□□□□□ -0.54
LINC01411-202ENST00000506862 EYA1Q99502 592 aa11.65□□□□□ -0.54
LINC01411-202ENST00000506862 MYH16Q9H6N6 1097 aa11.65□□□□□ -0.54
LINC01411-202ENST00000506862 CPDO75976 1380 aa11.65□□□□□ -0.55
LINC01411-202ENST00000506862 CSB-PGBD3P0DP91 1061 aa11.64□□□□□ -0.55
LINC01411-202ENST00000506862 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.64□□□□□ -0.55
LINC01411-202ENST00000506862 RRP7AQ9Y3A4 280 aaKnown RBP11.64□□□□□ -0.55
LINC01411-202ENST00000506862 DLG5Q8TDM6 1919 aa11.64□□□□□ -0.55
LINC01411-202ENST00000506862 KIAA0232Q92628 1395 aa11.64□□□□□ -0.55
LINC01411-202ENST00000506862 RGPD1P0DJD0 1748 aa11.63□□□□□ -0.55
LINC01411-202ENST00000506862 RIPK4P57078 832 aa11.63□□□□□ -0.55
LINC01411-202ENST00000506862 EVA1CP58658 441 aa11.63□□□□□ -0.55
LINC01411-202ENST00000506862 CHRNA2Q15822 529 aa11.63□□□□□ -0.55
LINC01411-202ENST00000506862 IL16Q14005 1332 aa11.62□□□□□ -0.55
LINC01411-202ENST00000506862 IGSF1Q8N6C5 1336 aa11.62□□□□□ -0.55
LINC01411-202ENST00000506862 NFE2L2Q16236 605 aa11.62□□□□□ -0.55
LINC01411-202ENST00000506862 DUSP27Q5VZP5 1158 aa11.62□□□□□ -0.55
LINC01411-202ENST00000506862 AXIN2Q9Y2T1 843 aa11.62□□□□□ -0.55
LINC01411-202ENST00000506862 CRYBG1Q9Y4K1 1723 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms