RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 DUOX2Q9NRD8 1548 aa11.8□□□□□ -0.52
PHF3-208ENST00000506783 NASPP49321 788 aaPredicted RBP11.8□□□□□ -0.52
PHF3-208ENST00000506783 PIP4K2AP48426 406 aaPredicted RBP11.8□□□□□ -0.52
PHF3-208ENST00000506783 ESCO1Q5FWF5 840 aa11.79□□□□□ -0.52
PHF3-208ENST00000506783 R3HCC1Q9Y3T6 440 aaKnown RBP11.79□□□□□ -0.52
PHF3-208ENST00000506783 K7ELQ4 463 aaPredicted RBP11.79□□□□□ -0.52
PHF3-208ENST00000506783 CPA1P15085 419 aa11.79□□□□□ -0.52
PHF3-208ENST00000506783 AMOTL2Q9Y2J4 779 aa11.79□□□□□ -0.52
PHF3-208ENST00000506783 ATP7AQ04656 1500 aa11.79□□□□□ -0.52
PHF3-208ENST00000506783 SYCE3A1L190 88 aa11.78□□□□□ -0.52
PHF3-208ENST00000506783 DDX11L8A8MPP1 907 aa11.78□□□□□ -0.52
PHF3-208ENST00000506783 CDC45O75419 566 aa11.78□□□□□ -0.52
PHF3-208ENST00000506783 PTPRTO14522 1441 aa11.78□□□□□ -0.52
PHF3-208ENST00000506783 POGZQ7Z3K3 1410 aa11.78□□□□□ -0.52
PHF3-208ENST00000506783 ATP10AO60312 1499 aa11.78□□□□□ -0.52
PHF3-208ENST00000506783 SRCAPQ6ZRS2 3230 aa11.78□□□□□ -0.52
PHF3-208ENST00000506783 INSRP06213 1382 aa11.78□□□□□ -0.52
PHF3-208ENST00000506783 PSME1Q06323 249 aa11.78□□□□□ -0.52
PHF3-208ENST00000506783 HSP90AA2PQ14568 343 aaPredicted RBP11.78□□□□□ -0.52
PHF3-208ENST00000506783 TCEANC2Q96MN5 208 aa11.78□□□□□ -0.52
PHF3-208ENST00000506783 SIL1Q9H173 461 aa11.78□□□□□ -0.52
PHF3-208ENST00000506783 ERVK-7P63135 1459 aa11.78□□□□□ -0.52
PHF3-208ENST00000506783 SURF6O75683 361 aaKnown RBP11.78□□□□□ -0.52
PHF3-208ENST00000506783 FCHSD2O94868 740 aa11.78□□□□□ -0.52
PHF3-208ENST00000506783 NUCB1Q02818 461 aa11.78□□□□□ -0.52
PHF3-208ENST00000506783 FAM177BA6PVY3 158 aa11.77□□□□□ -0.52
PHF3-208ENST00000506783 ZNF830Q96NB3 372 aaPredicted RBP11.77□□□□□ -0.52
PHF3-208ENST00000506783 ZBTB7BO15156 539 aaPredicted RBP11.77□□□□□ -0.53
PHF3-208ENST00000506783 SIRT2Q8IXJ6 389 aa11.77□□□□□ -0.53
PHF3-208ENST00000506783 SDSP20132 328 aa11.77□□□□□ -0.53
PHF3-208ENST00000506783 AEBP2Q6ZN18 517 aaPredicted RBP11.76□□□□□ -0.53
PHF3-208ENST00000506783 POLR3AO14802 1390 aaPredicted RBP11.76□□□□□ -0.53
PHF3-208ENST00000506783 MYO5CQ9NQX4 1742 aa11.76□□□□□ -0.53
PHF3-208ENST00000506783 ESPNB1AK53 854 aa11.76□□□□□ -0.53
PHF3-208ENST00000506783 ST18O60284 1047 aa11.76□□□□□ -0.53
PHF3-208ENST00000506783 ANTXR1Q9H6X2 564 aa11.76□□□□□ -0.53
PHF3-208ENST00000506783 API5Q9BZZ5 524 aaKnown RBP11.76□□□□□ -0.53
PHF3-208ENST00000506783 PIK3C2GO75747 1445 aa11.76□□□□□ -0.53
PHF3-208ENST00000506783 FAM43AQ8N2R8 423 aa11.75□□□□□ -0.53
PHF3-208ENST00000506783 MRPL50Q8N5N7 158 aaKnown RBP11.75□□□□□ -0.53
PHF3-208ENST00000506783 RIMBP3CA6NJZ7 1639 aa11.75□□□□□ -0.53
PHF3-208ENST00000506783 RIMBP3BA6NNM3 1639 aa11.75□□□□□ -0.53
PHF3-208ENST00000506783 RIMBP3Q9UFD9 1639 aa11.75□□□□□ -0.53
PHF3-208ENST00000506783 MRE11P49959 708 aa11.75□□□□□ -0.53
PHF3-208ENST00000506783 FERMT3Q86UX7 667 aa11.75□□□□□ -0.53
PHF3-208ENST00000506783 STAC3Q96MF2 364 aa11.75□□□□□ -0.53
PHF3-208ENST00000506783 SPG7Q9UQ90 795 aa11.75□□□□□ -0.53
PHF3-208ENST00000506783 RTEL1-TNFRSF6BF6WH68 1400 aa11.75□□□□□ -0.53
PHF3-208ENST00000506783 FIBPO43427 364 aa11.75□□□□□ -0.53
PHF3-208ENST00000506783 GSPT1P15170 499 aaKnown RBP11.74□□□□□ -0.53
PHF3-208ENST00000506783 FGD1P98174 961 aa11.74□□□□□ -0.53
PHF3-208ENST00000506783 CWC27Q6UX04 472 aaKnown RBP11.74□□□□□ -0.53
PHF3-208ENST00000506783 SMC5Q8IY18 1101 aa11.74□□□□□ -0.53
PHF3-208ENST00000506783 RSPH6AQ9H0K4 717 aa11.74□□□□□ -0.53
PHF3-208ENST00000506783 VPS37CA5D8V6 355 aaPredicted RBP11.74□□□□□ -0.53
PHF3-208ENST00000506783 CSB-PGBD3P0DP91 1061 aa11.74□□□□□ -0.53
PHF3-208ENST00000506783 ABTB2Q8N961 1025 aa11.74□□□□□ -0.53
PHF3-208ENST00000506783 PLEKHF1Q96S99 279 aa11.74□□□□□ -0.53
PHF3-208ENST00000506783 SHANK2Q9UPX8 1470 aa11.74□□□□□ -0.53
PHF3-208ENST00000506783 LTKP29376 864 aa11.74□□□□□ -0.53
PHF3-208ENST00000506783 CEBPZQ03701 1054 aaKnown RBP11.74□□□□□ -0.53
PHF3-208ENST00000506783 STK3Q13188 491 aa11.74□□□□□ -0.53
PHF3-208ENST00000506783 TNRQ92752 1358 aa11.73□□□□□ -0.53
PHF3-208ENST00000506783 CCDC61Q9Y6R9 512 aa11.73□□□□□ -0.53
PHF3-208ENST00000506783 INTS3Q68E01 1043 aaKnown RBP11.73□□□□□ -0.53
PHF3-208ENST00000506783 LRRFIP2Q9Y608 721 aaKnown RBP11.73□□□□□ -0.53
PHF3-208ENST00000506783 PLEKHM2Q8IWE5 1019 aa11.73□□□□□ -0.53
PHF3-208ENST00000506783 NPATQ14207 1427 aa11.73□□□□□ -0.53
PHF3-208ENST00000506783 RPGRIP1LQ68CZ1 1315 aa11.73□□□□□ -0.53
PHF3-208ENST00000506783 ADGBQ8N7X0 1667 aa11.72□□□□□ -0.53
PHF3-208ENST00000506783 BAG4O95429 457 aaKnown RBP11.72□□□□□ -0.53
PHF3-208ENST00000506783 ATF3P18847 181 aa11.72□□□□□ -0.53
PHF3-208ENST00000506783 HDAC1Q13547 482 aaPredicted RBP11.72□□□□□ -0.53
PHF3-208ENST00000506783 EIF4A2Q14240 407 aaKnown RBP11.72□□□□□ -0.53
PHF3-208ENST00000506783 KIAA1211Q6ZU35 1233 aa11.72□□□□□ -0.53
PHF3-208ENST00000506783 STK11IPQ8N1F8 1099 aa11.72□□□□□ -0.53
PHF3-208ENST00000506783 HMMRO75330 724 aa11.71□□□□□ -0.53
PHF3-208ENST00000506783 SPC24Q8NBT2 197 aa11.71□□□□□ -0.53
PHF3-208ENST00000506783 TSC1Q92574 1164 aa11.71□□□□□ -0.53
PHF3-208ENST00000506783 GCC1Q96CN9 775 aa11.71□□□□□ -0.53
PHF3-208ENST00000506783 WASLO00401 505 aaPredicted RBP11.71□□□□□ -0.53
PHF3-208ENST00000506783 ZBTB9Q96C00 473 aa11.71□□□□□ -0.53
PHF3-208ENST00000506783 CCDC85AQ96PX6 553 aaPredicted RBP11.71□□□□□ -0.53
PHF3-208ENST00000506783 PHAXQ9H814 394 aaKnown RBP11.71□□□□□ -0.53
PHF3-208ENST00000506783 TRPM1Q7Z4N2 1603 aa11.71□□□□□ -0.53
PHF3-208ENST00000506783 ANKRD36BQ8N2N9 1353 aa11.71□□□□□ -0.54
PHF3-208ENST00000506783 PRIM1P49642 420 aaKnown RBP11.71□□□□□ -0.54
PHF3-208ENST00000506783 MPRIPQ6WCQ1 1025 aa11.71□□□□□ -0.54
PHF3-208ENST00000506783 C17orf53Q8N3J3 647 aaPredicted RBP11.71□□□□□ -0.54
PHF3-208ENST00000506783 NDUFB9Q9Y6M9 179 aa11.71□□□□□ -0.54
PHF3-208ENST00000506783 CDC42BPBQ9Y5S2 1711 aa11.71□□□□□ -0.54
PHF3-208ENST00000506783 ABCC1P33527 1531 aa11.7□□□□□ -0.54
PHF3-208ENST00000506783 SYNMO15061 1565 aa11.7□□□□□ -0.54
PHF3-208ENST00000506783 CFAP44Q96MT7 982 aa11.7□□□□□ -0.54
PHF3-208ENST00000506783 SRGAP3O43295 1099 aa11.7□□□□□ -0.54
PHF3-208ENST00000506783 MYL6BP14649 208 aa11.7□□□□□ -0.54
PHF3-208ENST00000506783 HDGFL1Q5TGJ6 251 aa11.7□□□□□ -0.54
PHF3-208ENST00000506783 LMOD3Q0VAK6 560 aa11.7□□□□□ -0.54
PHF3-208ENST00000506783 MTHFSDQ2M296 383 aaKnown RBP11.7□□□□□ -0.54
PHF3-208ENST00000506783 BMP2KLQ5H9B9 411 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms