RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 STK26Q9P289 416 aa18.81■□□□□ 0.6
HERC6-206ENST00000506714 C3P01024 1663 aa18.81■□□□□ 0.6
HERC6-206ENST00000506714 CALD1Q05682 793 aaKnown RBP18.81■□□□□ 0.6
HERC6-206ENST00000506714 SENP3Q9H4L4 574 aaPredicted RBP18.81■□□□□ 0.6
HERC6-206ENST00000506714 LNPKQ9C0E8 428 aa18.8■□□□□ 0.6
HERC6-206ENST00000506714 GZF1Q9H116 711 aaPredicted RBP18.8■□□□□ 0.6
HERC6-206ENST00000506714 LRRC7Q96NW7 1537 aa18.8■□□□□ 0.6
HERC6-206ENST00000506714 YTHDC2Q9H6S0 1430 aaKnown RBP18.79■□□□□ 0.6
HERC6-206ENST00000506714 FAM135BQ49AJ0 1406 aa18.79■□□□□ 0.6
HERC6-206ENST00000506714 GBP4Q96PP9 640 aa18.79■□□□□ 0.6
HERC6-206ENST00000506714 RIMS2Q9UQ26 1411 aa18.78■□□□□ 0.6
HERC6-206ENST00000506714 MINK1Q8N4C8 1332 aaPredicted RBP18.78■□□□□ 0.6
HERC6-206ENST00000506714 PIK3R4Q99570 1358 aa18.78■□□□□ 0.6
HERC6-206ENST00000506714 UBR1Q8IWV7 1749 aa18.78■□□□□ 0.6
HERC6-206ENST00000506714 SKOR2Q2VWA4 1001 aaPredicted RBP18.77■□□□□ 0.6
HERC6-206ENST00000506714 PRAM1Q96QH2 718 aa18.77■□□□□ 0.6
HERC6-206ENST00000506714 ZBTB7BO15156 539 aaPredicted RBP18.77■□□□□ 0.6
HERC6-206ENST00000506714 HSP90AB1P08238 724 aaKnown RBP18.77■□□□□ 0.6
HERC6-206ENST00000506714 PTCH1Q13635 1447 aa18.77■□□□□ 0.6
HERC6-206ENST00000506714 MAP2P11137 1827 aaKnown RBP18.76■□□□□ 0.59
HERC6-206ENST00000506714 ALKQ9UM73 1620 aa18.76■□□□□ 0.59
HERC6-206ENST00000506714 ANKRD45Q5TZF3 282 aa18.75■□□□□ 0.59
HERC6-206ENST00000506714 GRPEL1Q9HAV7 217 aa18.75■□□□□ 0.59
HERC6-206ENST00000506714 PRKAR2BP31323 418 aa18.75■□□□□ 0.59
HERC6-206ENST00000506714 CLCN1P35523 988 aa18.75■□□□□ 0.59
HERC6-206ENST00000506714 NFE2L2Q16236 605 aa18.75■□□□□ 0.59
HERC6-206ENST00000506714 VAMP4O75379 141 aa18.74■□□□□ 0.59
HERC6-206ENST00000506714 GNAI1P63096 354 aa18.74■□□□□ 0.59
HERC6-206ENST00000506714 RAB3GAP1Q15042 981 aa18.74■□□□□ 0.59
HERC6-206ENST00000506714 MRPL50Q8N5N7 158 aaKnown RBP18.74■□□□□ 0.59
HERC6-206ENST00000506714 TNPO1Q92973 898 aaKnown RBP18.74■□□□□ 0.59
HERC6-206ENST00000506714 CFAP44Q96MT7 982 aa18.74■□□□□ 0.59
HERC6-206ENST00000506714 ARXQ96QS3 562 aa18.74■□□□□ 0.59
HERC6-206ENST00000506714 CDK19Q9BWU1 502 aa18.74■□□□□ 0.59
HERC6-206ENST00000506714 CEBPAP49715 358 aaPredicted RBP18.74■□□□□ 0.59
HERC6-206ENST00000506714 PANK2Q9BZ23 570 aa18.74■□□□□ 0.59
HERC6-206ENST00000506714 IFT57Q9NWB7 429 aa18.72■□□□□ 0.59
HERC6-206ENST00000506714 ATP7BP35670 1465 aa18.72■□□□□ 0.59
HERC6-206ENST00000506714 KIF2CQ99661 725 aa18.72■□□□□ 0.59
HERC6-206ENST00000506714 CABP1Q9NZU7 370 aa18.72■□□□□ 0.59
HERC6-206ENST00000506714 POLKQ9UBT6 870 aa18.71■□□□□ 0.59
HERC6-206ENST00000506714 SETD1AO15047 1707 aaKnown RBP18.71■□□□□ 0.59
HERC6-206ENST00000506714 K7ELQ4 463 aaPredicted RBP18.71■□□□□ 0.59
HERC6-206ENST00000506714 HSP90AA1P07900 732 aaKnown RBP18.71■□□□□ 0.59
HERC6-206ENST00000506714 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.71■□□□□ 0.59
HERC6-206ENST00000506714 ABCC4O15439 1325 aa18.7■□□□□ 0.58
HERC6-206ENST00000506714 KIF24Q5T7B8 1368 aa18.7■□□□□ 0.58
HERC6-206ENST00000506714 TBC1D9Q6ZT07 1266 aa18.7■□□□□ 0.58
HERC6-206ENST00000506714 RIMS1Q86UR5 1692 aaKnown RBP18.69■□□□□ 0.58
HERC6-206ENST00000506714 NRXN3Q9Y4C0 1643 aa18.69■□□□□ 0.58
HERC6-206ENST00000506714 DLC1Q96QB1 1528 aa18.69■□□□□ 0.58
HERC6-206ENST00000506714 DLG5Q8TDM6 1919 aa18.69■□□□□ 0.58
HERC6-206ENST00000506714 ZNF853P0CG23 659 aa18.69■□□□□ 0.58
HERC6-206ENST00000506714 LMOD3Q0VAK6 560 aa18.69■□□□□ 0.58
HERC6-206ENST00000506714 API5Q9BZZ5 524 aaKnown RBP18.69■□□□□ 0.58
HERC6-206ENST00000506714 CDC45O75419 566 aa18.68■□□□□ 0.58
HERC6-206ENST00000506714 HDGFP51858 240 aaKnown RBP18.68■□□□□ 0.58
HERC6-206ENST00000506714 UBE2Q2Q8WVN8 375 aa18.67■□□□□ 0.58
HERC6-206ENST00000506714 TMEM2Q9UHN6 1383 aa18.67■□□□□ 0.58
HERC6-206ENST00000506714 GOLGA6L22H0YM25 854 aa18.67■□□□□ 0.58
HERC6-206ENST00000506714 CLEC17AQ6ZS10 378 aa18.66■□□□□ 0.58
HERC6-206ENST00000506714 PHACTR3Q96KR7 559 aa18.66■□□□□ 0.58
HERC6-206ENST00000506714 CDK12Q9NYV4 1490 aaPredicted RBP18.66■□□□□ 0.58
HERC6-206ENST00000506714 TWISTNBQ3B726 338 aaPredicted RBP18.65■□□□□ 0.58
HERC6-206ENST00000506714 SIRT2Q8IXJ6 389 aa18.65■□□□□ 0.58
HERC6-206ENST00000506714 MBIPQ9NS73 344 aa18.65■□□□□ 0.58
HERC6-206ENST00000506714 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.65■□□□□ 0.58
HERC6-206ENST00000506714 TSPYL6Q8N831 410 aa18.65■□□□□ 0.58
HERC6-206ENST00000506714 C1orf115Q9H7X2 142 aa18.65■□□□□ 0.58
HERC6-206ENST00000506714 HMOX1P09601 288 aa18.63■□□□□ 0.57
HERC6-206ENST00000506714 IL13P35225 146 aa18.63■□□□□ 0.57
HERC6-206ENST00000506714 AATKQ6ZMQ8 1374 aa18.63■□□□□ 0.57
HERC6-206ENST00000506714 TRIM44Q96DX7 344 aaPredicted RBP18.63■□□□□ 0.57
HERC6-206ENST00000506714 EDC4Q6P2E9 1401 aaKnown RBP18.62■□□□□ 0.57
HERC6-206ENST00000506714 ESPNB1AK53 854 aa18.62■□□□□ 0.57
HERC6-206ENST00000506714 CD2BP2O95400 341 aaKnown RBP18.62■□□□□ 0.57
HERC6-206ENST00000506714 RABEP1Q15276 862 aa18.62■□□□□ 0.57
HERC6-206ENST00000506714 THUMPD2Q9BTF0 503 aaKnown RBP18.62■□□□□ 0.57
HERC6-206ENST00000506714 IBTKQ9P2D0 1353 aaPredicted RBP18.61■□□□□ 0.57
HERC6-206ENST00000506714 HAP1P54257 671 aaPredicted RBP18.61■□□□□ 0.57
HERC6-206ENST00000506714 NAP1L5Q96NT1 182 aaPredicted RBP18.61■□□□□ 0.57
HERC6-206ENST00000506714 ADAMTSL3P82987 1691 aa18.61■□□□□ 0.57
HERC6-206ENST00000506714 DCTPP1Q9H773 170 aa18.61■□□□□ 0.57
HERC6-206ENST00000506714 CPSF1Q10570 1443 aaKnown RBP18.6■□□□□ 0.57
HERC6-206ENST00000506714 PLEKHM2Q8IWE5 1019 aa18.6■□□□□ 0.57
HERC6-206ENST00000506714 KNDC1Q76NI1 1749 aa18.59■□□□□ 0.57
HERC6-206ENST00000506714 ELL2O00472 640 aaPredicted RBP18.59■□□□□ 0.57
HERC6-206ENST00000506714 GAS2L3Q86XJ1 694 aa18.59■□□□□ 0.57
HERC6-206ENST00000506714 GAS2L2Q8NHY3 880 aa18.59■□□□□ 0.57
HERC6-206ENST00000506714 KLHL40Q2TBA0 621 aa18.58■□□□□ 0.57
HERC6-206ENST00000506714 RBM42Q9BTD8 480 aaKnown RBP18.58■□□□□ 0.57
HERC6-206ENST00000506714 SLIT1O75093 1534 aa18.58■□□□□ 0.56
HERC6-206ENST00000506714 FBLN1P23142 703 aa18.58■□□□□ 0.56
HERC6-206ENST00000506714 NUCB2P80303 420 aa18.58■□□□□ 0.56
HERC6-206ENST00000506714 INTS3Q68E01 1043 aaKnown RBP18.58■□□□□ 0.56
HERC6-206ENST00000506714 C8orf58Q8NAV2 365 aa18.58■□□□□ 0.56
HERC6-206ENST00000506714 EMILIN1Q9Y6C2 1016 aa18.58■□□□□ 0.56
HERC6-206ENST00000506714 METP08581 1390 aa18.57■□□□□ 0.56
HERC6-206ENST00000506714 GSPT1P15170 499 aaKnown RBP18.57■□□□□ 0.56
HERC6-206ENST00000506714 SSFA2P28290 1259 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms