RNA–Protein interactions for RNA: ENST00000506239.6

SMN1-205, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 1,550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-205ENST00000506239 DMRT2Q9Y5R5 561 aa24.25■■□□□ 1.47
SMN1-205ENST00000506239 HSP90AB2PQ58FF8 381 aa24.25■■□□□ 1.47
SMN1-205ENST00000506239 NUTM2GQ5VZR2 741 aa24.25■■□□□ 1.47
SMN1-205ENST00000506239 RTL1A6NKG5 1358 aa24.24■■□□□ 1.47
SMN1-205ENST00000506239 SOX12O15370 315 aa24.24■■□□□ 1.47
SMN1-205ENST00000506239 SLIT3O75094 1523 aa24.24■■□□□ 1.47
SMN1-205ENST00000506239 NEFMP07197 916 aa24.23■■□□□ 1.47
SMN1-205ENST00000506239 KRT28Q7Z3Y7 464 aa24.23■■□□□ 1.47
SMN1-205ENST00000506239 HMOX1P09601 288 aa24.22■■□□□ 1.47
SMN1-205ENST00000506239 PHRF1Q9P1Y6 1649 aaKnown RBP24.22■■□□□ 1.47
SMN1-205ENST00000506239 AMPHP49418 695 aa24.21■■□□□ 1.47
SMN1-205ENST00000506239 KCNH5Q8NCM2 988 aa24.21■■□□□ 1.47
SMN1-205ENST00000506239 ALS2Q96Q42 1657 aa24.21■■□□□ 1.47
SMN1-205ENST00000506239 ARHGEF10O15013 1369 aa24.21■■□□□ 1.47
SMN1-205ENST00000506239 RRP1P56182 461 aaKnown RBP24.2■■□□□ 1.47
SMN1-205ENST00000506239 IRX6P78412 446 aaPredicted RBP24.2■■□□□ 1.47
SMN1-205ENST00000506239 TRIM35Q9UPQ4 493 aa24.2■■□□□ 1.47
SMN1-205ENST00000506239 USP19O94966 1318 aa24.2■■□□□ 1.46
SMN1-205ENST00000506239 LTN1O94822 1766 aa24.19■■□□□ 1.46
SMN1-205ENST00000506239 HOXC9P31274 260 aa24.19■■□□□ 1.46
SMN1-205ENST00000506239 RIPK4P57078 832 aa24.18■■□□□ 1.46
SMN1-205ENST00000506239 IL16Q14005 1332 aa24.18■■□□□ 1.46
SMN1-205ENST00000506239 XPCQ01831 940 aaPredicted RBP24.17■■□□□ 1.46
SMN1-205ENST00000506239 NFE2L2Q16236 605 aa24.17■■□□□ 1.46
SMN1-205ENST00000506239 NPHP3Q7Z494 1330 aa24.17■■□□□ 1.46
SMN1-205ENST00000506239 PHACTR3Q96KR7 559 aa24.16■■□□□ 1.46
SMN1-205ENST00000506239 KDRP35968 1356 aa24.15■■□□□ 1.46
SMN1-205ENST00000506239 PXDNQ92626 1479 aa24.14■■□□□ 1.46
SMN1-205ENST00000506239 IGSF1Q8N6C5 1336 aa24.14■■□□□ 1.46
SMN1-205ENST00000506239 SULT6B1Q6IMI4 303 aa24.14■■□□□ 1.45
SMN1-205ENST00000506239 MYH16Q9H6N6 1097 aa24.14■■□□□ 1.45
SMN1-205ENST00000506239 AEBP1Q8IUX7 1158 aa24.12■■□□□ 1.45
SMN1-205ENST00000506239 IP6K1Q92551 441 aa24.12■■□□□ 1.45
SMN1-205ENST00000506239 GCP02774 474 aa24.12■■□□□ 1.45
SMN1-205ENST00000506239 BRINP3Q76B58 766 aa24.11■■□□□ 1.45
SMN1-205ENST00000506239 TNS3Q68CZ2 1445 aa24.11■■□□□ 1.45
SMN1-205ENST00000506239 EYA1Q99502 592 aa24.1■■□□□ 1.45
SMN1-205ENST00000506239 PPP4R2Q9NY27 417 aa24.1■■□□□ 1.45
SMN1-205ENST00000506239 LMOD3Q0VAK6 560 aa24.09■■□□□ 1.45
SMN1-205ENST00000506239 DLG5Q8TDM6 1919 aa24.09■■□□□ 1.45
SMN1-205ENST00000506239 MED1Q15648 1581 aaPredicted RBP24.09■■□□□ 1.45
SMN1-205ENST00000506239 ARHGEF25Q86VW2 580 aa24.08■■□□□ 1.45
SMN1-205ENST00000506239 SLAIN2Q9P270 581 aa24.08■■□□□ 1.45
SMN1-205ENST00000506239 LMOD2Q6P5Q4 547 aa24.08■■□□□ 1.44
SMN1-205ENST00000506239 CALD1Q05682 793 aaKnown RBP24.07■■□□□ 1.44
SMN1-205ENST00000506239 DDX17Q92841 729 aaKnown RBP24.07■■□□□ 1.44
SMN1-205ENST00000506239 SPATA31A3Q5VYP0 1347 aa24.05■■□□□ 1.44
SMN1-205ENST00000506239 FANCIQ9NVI1 1328 aa24.05■■□□□ 1.44
SMN1-205ENST00000506239 CT47B1P0C2W7 299 aaPredicted RBP24.05■■□□□ 1.44
SMN1-205ENST00000506239 CRYBG1Q9Y4K1 1723 aa24.04■■□□□ 1.44
SMN1-205ENST00000506239 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.03■■□□□ 1.44
SMN1-205ENST00000506239 SOS2Q07890 1332 aaPredicted RBP24.02■■□□□ 1.44
SMN1-205ENST00000506239 ABCC6O95255 1503 aa24■■□□□ 1.43
SMN1-205ENST00000506239 PLIN1O60240 522 aa23.99■■□□□ 1.43
SMN1-205ENST00000506239 TSR2Q969E8 191 aaKnown RBP23.99■■□□□ 1.43
SMN1-205ENST00000506239 IFT57Q9NWB7 429 aa23.99■■□□□ 1.43
SMN1-205ENST00000506239 NHSL1Q5SYE7 1610 aa23.99■■□□□ 1.43
SMN1-205ENST00000506239 NCAPD2Q15021 1401 aa23.99■■□□□ 1.43
SMN1-205ENST00000506239 ZNF853P0CG23 659 aa23.99■■□□□ 1.43
SMN1-205ENST00000506239 LTV1Q96GA3 475 aaPredicted RBP23.99■■□□□ 1.43
SMN1-205ENST00000506239 LTBP4Q8N2S1 1624 aa23.98■■□□□ 1.43
SMN1-205ENST00000506239 CAMTA1Q9Y6Y1 1673 aa23.98■■□□□ 1.43
SMN1-205ENST00000506239 RARSP54136 660 aaKnown RBP23.98■■□□□ 1.43
SMN1-205ENST00000506239 GNAI1P63096 354 aa23.97■■□□□ 1.43
SMN1-205ENST00000506239 GAS2L2Q8NHY3 880 aa23.97■■□□□ 1.43
SMN1-205ENST00000506239 BCAR3O75815 825 aa23.96■■□□□ 1.43
SMN1-205ENST00000506239 EXOSC9Q06265 439 aaKnown RBP23.95■■□□□ 1.43
SMN1-205ENST00000506239 MTHFSDQ2M296 383 aaKnown RBP23.95■■□□□ 1.43
SMN1-205ENST00000506239 THUMPD2Q9BTF0 503 aaKnown RBP23.95■■□□□ 1.43
SMN1-205ENST00000506239 ZBTB7CA1YPR0 619 aa23.95■■□□□ 1.42
SMN1-205ENST00000506239 COL18A1P39060 1754 aa23.95■■□□□ 1.42
SMN1-205ENST00000506239 NBPF6Q5VWK0 638 aa23.95■■□□□ 1.42
SMN1-205ENST00000506239 NBPF4Q96M43 638 aa23.95■■□□□ 1.42
SMN1-205ENST00000506239 CFAP44Q96MT7 982 aa23.95■■□□□ 1.42
SMN1-205ENST00000506239 CPDO75976 1380 aa23.94■■□□□ 1.42
SMN1-205ENST00000506239 EXOC6Q8TAG9 804 aa23.94■■□□□ 1.42
SMN1-205ENST00000506239 FAM83GA6ND36 823 aa23.93■■□□□ 1.42
SMN1-205ENST00000506239 PELP1Q8IZL8 1130 aaKnown RBP23.93■■□□□ 1.42
SMN1-205ENST00000506239 RGPD2P0DJD1 1756 aa23.93■■□□□ 1.42
SMN1-205ENST00000506239 HTATSF1O43719 755 aaKnown RBP23.92■■□□□ 1.42
SMN1-205ENST00000506239 ANKRD24Q8TF21 1146 aa23.92■■□□□ 1.42
SMN1-205ENST00000506239 LMO7Q8WWI1 1683 aa23.91■■□□□ 1.42
SMN1-205ENST00000506239 ZC3H6P61129 1189 aaKnown RBP23.91■■□□□ 1.42
SMN1-205ENST00000506239 AXIN2Q9Y2T1 843 aa23.91■■□□□ 1.42
SMN1-205ENST00000506239 PLEKHG5O94827 1062 aa23.91■■□□□ 1.42
SMN1-205ENST00000506239 RGPD5Q99666 1765 aa23.91■■□□□ 1.42
SMN1-205ENST00000506239 ERBB3P21860 1342 aa23.9■■□□□ 1.42
SMN1-205ENST00000506239 DCTN1Q14203 1278 aa23.9■■□□□ 1.42
SMN1-205ENST00000506239 C20orf194Q5TEA3 1177 aa23.9■■□□□ 1.42
SMN1-205ENST00000506239 ZNF428Q96B54 188 aa23.9■■□□□ 1.42
SMN1-205ENST00000506239 CRB1P82279 1406 aa23.9■■□□□ 1.42
SMN1-205ENST00000506239 LRRC37A3O60309 1634 aa23.89■■□□□ 1.42
SMN1-205ENST00000506239 USHBP1Q8N6Y0 703 aa23.89■■□□□ 1.41
SMN1-205ENST00000506239 CRBNQ96SW2 442 aa23.89■■□□□ 1.41
SMN1-205ENST00000506239 MBIPQ9NS73 344 aa23.89■■□□□ 1.41
SMN1-205ENST00000506239 PDE3AQ14432 1141 aa23.88■■□□□ 1.41
SMN1-205ENST00000506239 B4GALNT3Q6L9W6 998 aa23.88■■□□□ 1.41
SMN1-205ENST00000506239 CABLES1Q8TDN4 633 aa23.88■■□□□ 1.41
SMN1-205ENST00000506239 LRRC59Q96AG4 307 aaKnown RBP23.88■■□□□ 1.41
SMN1-205ENST00000506239 LAS1LQ9Y4W2 734 aaKnown RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms