RNA–Protein interactions for RNA: ENST00000504331.1

OTUD4-204, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 591 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-204ENST00000504331 UHRF1BP1Q6BDS2 1440 aa8.42□□□□□ -1.06
OTUD4-204ENST00000504331 PREX1Q8TCU6 1659 aa8.41□□□□□ -1.06
OTUD4-204ENST00000504331 ATP10AO60312 1499 aa8.41□□□□□ -1.06
OTUD4-204ENST00000504331 GDF11O95390 407 aa8.41□□□□□ -1.06
OTUD4-204ENST00000504331 RASSF7Q02833 373 aa8.41□□□□□ -1.06
OTUD4-204ENST00000504331 EFCAB2Q5VUJ9 269 aa8.41□□□□□ -1.06
OTUD4-204ENST00000504331 ZFP42Q96MM3 310 aa8.41□□□□□ -1.06
OTUD4-204ENST00000504331 RICTORQ6R327 1708 aa8.4□□□□□ -1.06
OTUD4-204ENST00000504331 ZFYVE16Q7Z3T8 1539 aa8.4□□□□□ -1.06
OTUD4-204ENST00000504331 GCGRP47871 477 aa8.4□□□□□ -1.06
OTUD4-204ENST00000504331 WNT7BP56706 349 aa8.4□□□□□ -1.06
OTUD4-204ENST00000504331 XP32Q5T750 250 aa8.4□□□□□ -1.06
OTUD4-204ENST00000504331 RAPGEF6Q8TEU7 1601 aa8.4□□□□□ -1.07
OTUD4-204ENST00000504331 FRMPD1Q5SYB0 1578 aa8.39□□□□□ -1.07
OTUD4-204ENST00000504331 C9orf84Q5VXU9 1444 aa8.39□□□□□ -1.07
OTUD4-204ENST00000504331 DDX11L8A8MPP1 907 aa8.39□□□□□ -1.07
OTUD4-204ENST00000504331 DXOO77932 396 aaKnown RBP8.39□□□□□ -1.07
OTUD4-204ENST00000504331 ARHGEF12Q9NZN5 1544 aa8.39□□□□□ -1.07
OTUD4-204ENST00000504331 SIAH2O43255 324 aa8.38□□□□□ -1.07
OTUD4-204ENST00000504331 FCHSD2O94868 740 aa8.38□□□□□ -1.07
OTUD4-204ENST00000504331 SPATA31D1Q6ZQQ2 1576 aa8.38□□□□□ -1.07
OTUD4-204ENST00000504331 FER1L4A9Z1Z3 1794 aa8.38□□□□□ -1.07
OTUD4-204ENST00000504331 PLCH2O75038 1416 aa8.37□□□□□ -1.07
OTUD4-204ENST00000504331 CNTLNQ9NXG0 1405 aa8.37□□□□□ -1.07
OTUD4-204ENST00000504331 BBXQ8WY36 941 aaPredicted RBP8.37□□□□□ -1.07
OTUD4-204ENST00000504331 SCAPERQ9BY12 1400 aa8.37□□□□□ -1.07
OTUD4-204ENST00000504331 TRAPPC8Q9Y2L5 1435 aa8.37□□□□□ -1.07
OTUD4-204ENST00000504331 SOBPA7XYQ1 873 aa8.36□□□□□ -1.07
OTUD4-204ENST00000504331 NLRP7Q8WX94 980 aa8.36□□□□□ -1.07
OTUD4-204ENST00000504331 SAMD9Q5K651 1589 aa8.35□□□□□ -1.07
OTUD4-204ENST00000504331 ZNF518AQ6AHZ1 1483 aa8.35□□□□□ -1.07
OTUD4-204ENST00000504331 MLECQ14165 292 aa8.35□□□□□ -1.07
OTUD4-204ENST00000504331 BCANQ96GW7 911 aa8.35□□□□□ -1.07
OTUD4-204ENST00000504331 NUP153P49790 1475 aaKnown RBP8.34□□□□□ -1.07
OTUD4-204ENST00000504331 P3H3Q8IVL6 736 aa8.34□□□□□ -1.07
OTUD4-204ENST00000504331 EEA1Q15075 1411 aa8.34□□□□□ -1.07
OTUD4-204ENST00000504331 REREQ9P2R6 1566 aa8.34□□□□□ -1.07
OTUD4-204ENST00000504331 AGLP35573 1532 aa8.34□□□□□ -1.08
OTUD4-204ENST00000504331 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.34□□□□□ -1.08
OTUD4-204ENST00000504331 HECW1Q76N89 1606 aa8.33□□□□□ -1.08
OTUD4-204ENST00000504331 STRCQ7RTU9 1775 aa8.33□□□□□ -1.08
OTUD4-204ENST00000504331 CCDC24Q8N4L8 307 aa8.33□□□□□ -1.08
OTUD4-204ENST00000504331 KRTAP4-8Q9BYQ9 185 aa8.33□□□□□ -1.08
OTUD4-204ENST00000504331 NPATQ14207 1427 aa8.32□□□□□ -1.08
OTUD4-204ENST00000504331 ARID3CA6NKF2 412 aa8.32□□□□□ -1.08
OTUD4-204ENST00000504331 TOM1O60784 492 aa8.32□□□□□ -1.08
OTUD4-204ENST00000504331 WASF2Q9Y6W5 498 aa8.32□□□□□ -1.08
OTUD4-204ENST00000504331 Q3C1V9 767 aa8.31□□□□□ -1.08
OTUD4-204ENST00000504331 SPRYD3Q8NCJ5 442 aa8.31□□□□□ -1.08
OTUD4-204ENST00000504331 USB1Q9BQ65 265 aaKnown RBP8.31□□□□□ -1.08
OTUD4-204ENST00000504331 LTBP4Q8N2S1 1624 aa8.31□□□□□ -1.08
OTUD4-204ENST00000504331 MLH3Q9UHC1 1453 aa8.31□□□□□ -1.08
OTUD4-204ENST00000504331 UBAP1LF5GYI3 381 aa8.3□□□□□ -1.08
OTUD4-204ENST00000504331 CEBPAP49715 358 aaPredicted RBP8.3□□□□□ -1.08
OTUD4-204ENST00000504331 EHBP1Q8NDI1 1231 aa8.3□□□□□ -1.08
OTUD4-204ENST00000504331 ARHGEF1Q92888 912 aaKnown RBP8.3□□□□□ -1.08
OTUD4-204ENST00000504331 ADAMTS8Q9UP79 889 aa8.3□□□□□ -1.08
OTUD4-204ENST00000504331 NCOA1Q15788 1441 aa8.29□□□□□ -1.08
OTUD4-204ENST00000504331 RNF225M0QZC1 329 aaPredicted RBP8.29□□□□□ -1.08
OTUD4-204ENST00000504331 KRT76Q01546 638 aa8.29□□□□□ -1.08
OTUD4-204ENST00000504331 GPAT2Q6NUI2 795 aa8.29□□□□□ -1.08
OTUD4-204ENST00000504331 MRPL14Q6P1L8 145 aaKnown RBP8.29□□□□□ -1.08
OTUD4-204ENST00000504331 PLA2R1Q13018 1463 aa8.29□□□□□ -1.08
OTUD4-204ENST00000504331 FMN1Q68DA7 1419 aa8.29□□□□□ -1.08
OTUD4-204ENST00000504331 PURBQ96QR8 312 aaKnown RBP8.28□□□□□ -1.08
OTUD4-204ENST00000504331 CLIP1P30622 1438 aa8.28□□□□□ -1.08
OTUD4-204ENST00000504331 KDM5CP41229 1560 aa8.27□□□□□ -1.09
OTUD4-204ENST00000504331 HIC1Q14526 733 aa8.27□□□□□ -1.09
OTUD4-204ENST00000504331 SULF1Q8IWU6 871 aa8.27□□□□□ -1.09
OTUD4-204ENST00000504331 PHOX2BQ99453 314 aa8.27□□□□□ -1.09
OTUD4-204ENST00000504331 GRIPAP1Q4V328 841 aa8.26□□□□□ -1.09
OTUD4-204ENST00000504331 PTCRAQ6ISU1 281 aaPredicted RBP8.26□□□□□ -1.09
OTUD4-204ENST00000504331 KCNV2Q8TDN2 545 aa8.26□□□□□ -1.09
OTUD4-204ENST00000504331 DNMT3AQ9Y6K1 912 aaPredicted RBP8.26□□□□□ -1.09
OTUD4-204ENST00000504331 MYO5CQ9NQX4 1742 aa8.26□□□□□ -1.09
OTUD4-204ENST00000504331 AFAP1Q8N556 730 aa8.25□□□□□ -1.09
OTUD4-204ENST00000504331 HLA-CQ95604 372 aa8.25□□□□□ -1.09
OTUD4-204ENST00000504331 TLL2Q9Y6L7 1015 aa8.25□□□□□ -1.09
OTUD4-204ENST00000504331 PTPRKQ15262 1439 aa8.25□□□□□ -1.09
OTUD4-204ENST00000504331 MROH2AA6NES4 1674 aa8.24□□□□□ -1.09
OTUD4-204ENST00000504331 ZMYM3Q14202 1370 aa8.24□□□□□ -1.09
OTUD4-204ENST00000504331 PPFIA3O75145 1194 aa8.24□□□□□ -1.09
OTUD4-204ENST00000504331 C3P01024 1663 aa8.24□□□□□ -1.09
OTUD4-204ENST00000504331 IGHA1P01876 353 aa8.23□□□□□ -1.09
OTUD4-204ENST00000504331 PLCB2Q00722 1185 aa8.23□□□□□ -1.09
OTUD4-204ENST00000504331 SCARF1Q14162 830 aa8.23□□□□□ -1.09
OTUD4-204ENST00000504331 ARXQ96QS3 562 aa8.23□□□□□ -1.09
OTUD4-204ENST00000504331 CPS1P31327 1500 aa8.23□□□□□ -1.09
OTUD4-204ENST00000504331 TROQ12816 1431 aaPredicted RBP8.22□□□□□ -1.09
OTUD4-204ENST00000504331 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.22□□□□□ -1.09
OTUD4-204ENST00000504331 PRKCSHP14314 528 aaPredicted RBP8.22□□□□□ -1.09
OTUD4-204ENST00000504331 TIMP2P16035 220 aa8.22□□□□□ -1.09
OTUD4-204ENST00000504331 SH3BP2P78314 561 aa8.22□□□□□ -1.09
OTUD4-204ENST00000504331 SIGLEC1Q9BZZ2 1709 aa8.22□□□□□ -1.09
OTUD4-204ENST00000504331 CAMSAP1Q5T5Y3 1602 aa8.21□□□□□ -1.09
OTUD4-204ENST00000504331 TCOF1Q13428 1488 aaKnown RBP8.21□□□□□ -1.09
OTUD4-204ENST00000504331 ARHGAP5Q13017 1502 aa8.21□□□□□ -1.1
OTUD4-204ENST00000504331 NNTQ13423 1086 aa8.21□□□□□ -1.1
OTUD4-204ENST00000504331 GPR161Q8N6U8 529 aaKnown RBP8.21□□□□□ -1.1
OTUD4-204ENST00000504331 KIF14Q15058 1648 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms