RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 CREB3O43889 395 aa7.43□□□□□ -1.22
CLCN3-204ENST00000504131 ABL2P42684 1182 aa7.43□□□□□ -1.22
CLCN3-204ENST00000504131 UBE2Q1Q7Z7E8 422 aa7.43□□□□□ -1.22
CLCN3-204ENST00000504131 SSFA2P28290 1259 aa7.42□□□□□ -1.22
CLCN3-204ENST00000504131 PDE6BP35913 854 aa7.42□□□□□ -1.22
CLCN3-204ENST00000504131 SEPT7Q16181 437 aaKnown RBP7.42□□□□□ -1.22
CLCN3-204ENST00000504131 C16orf87Q6PH81 154 aa7.42□□□□□ -1.22
CLCN3-204ENST00000504131 SLC24A3Q9HC58 644 aa7.42□□□□□ -1.22
CLCN3-204ENST00000504131 TSPY2A6NKD2 308 aa7.42□□□□□ -1.22
CLCN3-204ENST00000504131 TSPY3P0CV98 308 aa7.42□□□□□ -1.22
CLCN3-204ENST00000504131 TSPY8P0CW00 308 aa7.42□□□□□ -1.22
CLCN3-204ENST00000504131 TSPY1Q01534 308 aa7.42□□□□□ -1.22
CLCN3-204ENST00000504131 FAM212AQ96EL1 285 aa7.42□□□□□ -1.22
CLCN3-204ENST00000504131 LIMCH1Q9UPQ0 1083 aa7.42□□□□□ -1.22
CLCN3-204ENST00000504131 NFXL1Q6ZNB6 911 aa7.42□□□□□ -1.22
CLCN3-204ENST00000504131 ANKRD18AQ8IVF6 992 aa7.42□□□□□ -1.22
CLCN3-204ENST00000504131 HDAC9Q9UKV0 1011 aa7.42□□□□□ -1.22
CLCN3-204ENST00000504131 MS4A1P11836 297 aa7.42□□□□□ -1.22
CLCN3-204ENST00000504131 GBP6Q6ZN66 633 aa7.42□□□□□ -1.22
CLCN3-204ENST00000504131 DDX11Q96FC9 970 aa7.42□□□□□ -1.22
CLCN3-204ENST00000504131 KDM4CQ9H3R0 1056 aa7.42□□□□□ -1.22
CLCN3-204ENST00000504131 BSDC1Q9NW68 430 aaPredicted RBP7.42□□□□□ -1.22
CLCN3-204ENST00000504131 GABBR1Q9UBS5 961 aa7.42□□□□□ -1.22
CLCN3-204ENST00000504131 RABL2BQ9UNT1 228 aa7.42□□□□□ -1.22
CLCN3-204ENST00000504131 SF3B2Q13435 895 aaKnown RBP7.41□□□□□ -1.22
CLCN3-204ENST00000504131 FAM184AQ8NB25 1140 aa7.41□□□□□ -1.22
CLCN3-204ENST00000504131 CCDC191Q8NCU4 936 aa7.41□□□□□ -1.22
CLCN3-204ENST00000504131 CTNNBL1Q8WYA6 563 aaPredicted RBP7.41□□□□□ -1.22
CLCN3-204ENST00000504131 USP6NLQ92738 828 aa7.41□□□□□ -1.22
CLCN3-204ENST00000504131 SLKQ9H2G2 1235 aaPredicted RBP7.41□□□□□ -1.22
CLCN3-204ENST00000504131 IQSEC3Q9UPP2 1182 aaPredicted RBP7.41□□□□□ -1.22
CLCN3-204ENST00000504131 E2F5Q15329 346 aa7.41□□□□□ -1.22
CLCN3-204ENST00000504131 CCDC152Q4G0S7 254 aa7.41□□□□□ -1.22
CLCN3-204ENST00000504131 ZBTB17Q13105 803 aa7.41□□□□□ -1.22
CLCN3-204ENST00000504131 SYAP1Q96A49 352 aaPredicted RBP7.41□□□□□ -1.22
CLCN3-204ENST00000504131 GOLGA6L4A6NEF3 574 aa7.41□□□□□ -1.22
CLCN3-204ENST00000504131 PPP1R12AO14974 1030 aaPredicted RBP7.41□□□□□ -1.22
CLCN3-204ENST00000504131 CAND2O75155 1236 aa7.41□□□□□ -1.22
CLCN3-204ENST00000504131 PRPF38AQ8NAV1 312 aaKnown RBP7.41□□□□□ -1.22
CLCN3-204ENST00000504131 CCDC85AQ96PX6 553 aaPredicted RBP7.41□□□□□ -1.22
CLCN3-204ENST00000504131 NUB1Q9Y5A7 615 aa7.41□□□□□ -1.22
CLCN3-204ENST00000504131 XBP1P17861 261 aa7.41□□□□□ -1.22
CLCN3-204ENST00000504131 MMP14P50281 582 aa7.41□□□□□ -1.22
CLCN3-204ENST00000504131 WDR75Q8IWA0 830 aaKnown RBP7.41□□□□□ -1.22
CLCN3-204ENST00000504131 NCAPD3P42695 1498 aa7.4□□□□□ -1.22
CLCN3-204ENST00000504131 TPM4P67936 248 aa7.4□□□□□ -1.22
CLCN3-204ENST00000504131 NUCB2P80303 420 aa7.4□□□□□ -1.22
CLCN3-204ENST00000504131 CRACR2AQ9BSW2 395 aa7.4□□□□□ -1.22
CLCN3-204ENST00000504131 TRAIPQ9BWF2 469 aa7.4□□□□□ -1.22
CLCN3-204ENST00000504131 TRIM6Q9C030 488 aaPredicted RBP7.4□□□□□ -1.22
CLCN3-204ENST00000504131 C1orf115Q9H7X2 142 aa7.4□□□□□ -1.22
CLCN3-204ENST00000504131 PRPHP41219 470 aa7.4□□□□□ -1.22
CLCN3-204ENST00000504131 NEXNQ0ZGT2 675 aa7.4□□□□□ -1.22
CLCN3-204ENST00000504131 MCM6Q14566 821 aa7.4□□□□□ -1.22
CLCN3-204ENST00000504131 ICE2Q659A1 982 aa7.4□□□□□ -1.22
CLCN3-204ENST00000504131 SLC52A1Q9NWF4 448 aa7.4□□□□□ -1.22
CLCN3-204ENST00000504131 V9GYY5 206 aaPredicted RBP7.4□□□□□ -1.22
CLCN3-204ENST00000504131 FLCNQ8NFG4 579 aa7.4□□□□□ -1.23
CLCN3-204ENST00000504131 MAP4K4O95819 1239 aaPredicted RBP7.4□□□□□ -1.23
CLCN3-204ENST00000504131 CCDC96Q2M329 555 aa7.39□□□□□ -1.23
CLCN3-204ENST00000504131 GCKP35557 465 aa7.39□□□□□ -1.23
CLCN3-204ENST00000504131 ZNF131P52739 623 aa7.39□□□□□ -1.23
CLCN3-204ENST00000504131 SLC4A8Q2Y0W8 1093 aa7.39□□□□□ -1.23
CLCN3-204ENST00000504131 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.39□□□□□ -1.23
CLCN3-204ENST00000504131 WASHC2AQ641Q2 1341 aa7.39□□□□□ -1.23
CLCN3-204ENST00000504131 ZSCAN30Q86W11 494 aa7.39□□□□□ -1.23
CLCN3-204ENST00000504131 OSCARQ8IYS5 282 aa7.39□□□□□ -1.23
CLCN3-204ENST00000504131 CHCHD4Q8N4Q1 142 aa7.39□□□□□ -1.23
CLCN3-204ENST00000504131 MAGEC2Q9UBF1 373 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-204ENST00000504131 IGBP1P78318 339 aa7.39□□□□□ -1.23
CLCN3-204ENST00000504131 TRDNQ13061 729 aa7.39□□□□□ -1.23
CLCN3-204ENST00000504131 SYCP1Q15431 976 aa7.39□□□□□ -1.23
CLCN3-204ENST00000504131 RNF20Q5VTR2 975 aa7.39□□□□□ -1.23
CLCN3-204ENST00000504131 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.39□□□□□ -1.23
CLCN3-204ENST00000504131 ATP6V1E2Q96A05 226 aa7.39□□□□□ -1.23
CLCN3-204ENST00000504131 SLC4A3P48751 1232 aa7.38□□□□□ -1.23
CLCN3-204ENST00000504131 DEUP1Q05D60 604 aa7.38□□□□□ -1.23
CLCN3-204ENST00000504131 MYBPC2Q14324 1141 aa7.38□□□□□ -1.23
CLCN3-204ENST00000504131 NOC3LQ8WTT2 800 aaKnown RBP7.38□□□□□ -1.23
CLCN3-204ENST00000504131 ACBD3Q9H3P7 528 aa7.38□□□□□ -1.23
CLCN3-204ENST00000504131 DDX11L8A8MPP1 907 aa7.38□□□□□ -1.23
CLCN3-204ENST00000504131 CEP104O60308 925 aa7.38□□□□□ -1.23
CLCN3-204ENST00000504131 TRIM21P19474 475 aaKnown RBP7.38□□□□□ -1.23
CLCN3-204ENST00000504131 TXLNBQ8N3L3 684 aa7.38□□□□□ -1.23
CLCN3-204ENST00000504131 RABL2AQ9UBK7 228 aaPredicted RBP7.38□□□□□ -1.23
CLCN3-204ENST00000504131 AMOTQ4VCS5 1084 aa7.38□□□□□ -1.23
CLCN3-204ENST00000504131 CCDC70Q6NSX1 233 aa7.38□□□□□ -1.23
CLCN3-204ENST00000504131 ATG3Q9NT62 314 aa7.38□□□□□ -1.23
CLCN3-204ENST00000504131 BRD3Q15059 726 aa7.38□□□□□ -1.23
CLCN3-204ENST00000504131 CCDC39Q9UFE4 941 aa7.38□□□□□ -1.23
CLCN3-204ENST00000504131 A0A1B0GUA9 196 aa7.38□□□□□ -1.23
CLCN3-204ENST00000504131 RABEP1Q15276 862 aa7.38□□□□□ -1.23
CLCN3-204ENST00000504131 NBPF8Q3BBV2 869 aa7.37□□□□□ -1.23
CLCN3-204ENST00000504131 DRC7Q8IY82 874 aa7.37□□□□□ -1.23
CLCN3-204ENST00000504131 MPHOSPH6Q99547 160 aaKnown RBP7.37□□□□□ -1.23
CLCN3-204ENST00000504131 CXorf56Q9H5V9 222 aa7.37□□□□□ -1.23
CLCN3-204ENST00000504131 ARGLU1Q9NWB6 273 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-204ENST00000504131 MKL2Q9ULH7 1088 aa7.37□□□□□ -1.23
CLCN3-204ENST00000504131 MAP7D1Q3KQU3 841 aa7.37□□□□□ -1.23
CLCN3-204ENST00000504131 SKAP1Q86WV1 359 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms