RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 AVPP01185 164 aa6.42□□□□□ -1.38
ATXN3-208ENST00000504047 DHX9Q08211 1270 aaKnown RBP6.42□□□□□ -1.38
ATXN3-208ENST00000504047 IRF5Q13568 498 aa6.42□□□□□ -1.38
ATXN3-208ENST00000504047 POM121Q96HA1 1249 aa6.42□□□□□ -1.38
ATXN3-208ENST00000504047 SOX11P35716 441 aa6.41□□□□□ -1.38
ATXN3-208ENST00000504047 VAC14Q08AM6 782 aa6.41□□□□□ -1.38
ATXN3-208ENST00000504047 RNF20Q5VTR2 975 aa6.41□□□□□ -1.38
ATXN3-208ENST00000504047 CCDC125Q86Z20 511 aa6.41□□□□□ -1.38
ATXN3-208ENST00000504047 CCDC116Q8IYX3 515 aa6.41□□□□□ -1.38
ATXN3-208ENST00000504047 HPS1Q92902 700 aa6.41□□□□□ -1.38
ATXN3-208ENST00000504047 AXIN1O15169 862 aa6.4□□□□□ -1.38
ATXN3-208ENST00000504047 GRM5P41594 1212 aa6.4□□□□□ -1.38
ATXN3-208ENST00000504047 TRAF7Q6Q0C0 670 aa6.4□□□□□ -1.38
ATXN3-208ENST00000504047 SEPT12Q8IYM1 358 aa6.4□□□□□ -1.38
ATXN3-208ENST00000504047 CLUAP1Q96AJ1 413 aa6.4□□□□□ -1.38
ATXN3-208ENST00000504047 EMILIN1Q9Y6C2 1016 aa6.4□□□□□ -1.38
ATXN3-208ENST00000504047 WDR4P57081 412 aaKnown RBP6.39□□□□□ -1.39
ATXN3-208ENST00000504047 MYT1Q01538 1121 aa6.39□□□□□ -1.39
ATXN3-208ENST00000504047 SEMA3FQ13275 785 aa6.39□□□□□ -1.39
ATXN3-208ENST00000504047 PROSER2Q86WR7 435 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-208ENST00000504047 CRIPAKQ8N1N5 446 aa6.39□□□□□ -1.39
ATXN3-208ENST00000504047 PGPEP1Q9NXJ5 209 aa6.39□□□□□ -1.39
ATXN3-208ENST00000504047 A6NJR5 290 aa6.38□□□□□ -1.39
ATXN3-208ENST00000504047 CAPN5O15484 640 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-208ENST00000504047 NR3C2P08235 984 aa6.38□□□□□ -1.39
ATXN3-208ENST00000504047 SMCPP49901 116 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-208ENST00000504047 RAB15P59190 212 aa6.38□□□□□ -1.39
ATXN3-208ENST00000504047 INTS6LQ5JSJ4 861 aaKnown RBP6.38□□□□□ -1.39
ATXN3-208ENST00000504047 GIGYF1O75420 1035 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-208ENST00000504047 ZIC2O95409 532 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-208ENST00000504047 PPP1R26Q5T8A7 1209 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-208ENST00000504047 ESPNB1AK53 854 aa6.36□□□□□ -1.39
ATXN3-208ENST00000504047 TIMP2P16035 220 aa6.36□□□□□ -1.39
ATXN3-208ENST00000504047 SLFNL1Q499Z3 407 aa6.36□□□□□ -1.39
ATXN3-208ENST00000504047 ERICH6Q7L0X2 663 aa6.36□□□□□ -1.39
ATXN3-208ENST00000504047 AAASQ9NRG9 546 aa6.36□□□□□ -1.39
ATXN3-208ENST00000504047 CEP126Q9P2H0 1117 aa6.36□□□□□ -1.39
ATXN3-208ENST00000504047 ITPKCQ96DU7 683 aa6.35□□□□□ -1.39
ATXN3-208ENST00000504047 ESF1Q9H501 851 aaKnown RBP6.35□□□□□ -1.39
ATXN3-208ENST00000504047 ERVH48-1M5A8F1 160 aa6.34□□□□□ -1.39
ATXN3-208ENST00000504047 ST8SIA5O15466 376 aa6.34□□□□□ -1.39
ATXN3-208ENST00000504047 UPP2O95045 317 aa6.34□□□□□ -1.39
ATXN3-208ENST00000504047 FNBP4Q8N3X1 1017 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-208ENST00000504047 KLF16Q9BXK1 252 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-208ENST00000504047 RNF135Q8IUD6 432 aa6.33□□□□□ -1.4
ATXN3-208ENST00000504047 ZMYND15Q9H091 742 aa6.33□□□□□ -1.4
ATXN3-208ENST00000504047 ZFAND3Q9H8U3 227 aa6.33□□□□□ -1.4
ATXN3-208ENST00000504047 TMPRSS4Q9NRS4 437 aa6.33□□□□□ -1.4
ATXN3-208ENST00000504047 SCARF1Q14162 830 aa6.32□□□□□ -1.4
ATXN3-208ENST00000504047 C14orf37Q86TY3 774 aa6.32□□□□□ -1.4
ATXN3-208ENST00000504047 ZNF784Q8NCA9 323 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-208ENST00000504047 ALG2Q9H553 416 aa6.32□□□□□ -1.4
ATXN3-208ENST00000504047 SENP2Q9HC62 589 aa6.32□□□□□ -1.4
ATXN3-208ENST00000504047 PCDHB11Q9Y5F2 797 aa6.32□□□□□ -1.4
ATXN3-208ENST00000504047 POM121CA8CG34 1229 aa6.31□□□□□ -1.4
ATXN3-208ENST00000504047 TRAK2O60296 914 aa6.31□□□□□ -1.4
ATXN3-208ENST00000504047 HDGFL1Q5TGJ6 251 aa6.31□□□□□ -1.4
ATXN3-208ENST00000504047 MRPL14Q6P1L8 145 aaKnown RBP6.31□□□□□ -1.4
ATXN3-208ENST00000504047 ATP13A2Q9NQ11 1180 aa6.31□□□□□ -1.4
ATXN3-208ENST00000504047 CYLDQ9NQC7 956 aa6.31□□□□□ -1.4
ATXN3-208ENST00000504047 DOLKQ9UPQ8 538 aa6.31□□□□□ -1.4
ATXN3-208ENST00000504047 MYCP01106 439 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-208ENST00000504047 MAP7D1Q3KQU3 841 aa6.3□□□□□ -1.4
ATXN3-208ENST00000504047 CC2D2BQ6DHV5 1058 aa6.3□□□□□ -1.4
ATXN3-208ENST00000504047 Q6ZVU0 165 aa6.3□□□□□ -1.4
ATXN3-208ENST00000504047 PHTF2Q8N3S3 785 aa6.3□□□□□ -1.4
ATXN3-208ENST00000504047 MEIOBQ8N635 442 aa6.3□□□□□ -1.4
ATXN3-208ENST00000504047 GLMNQ92990 594 aa6.3□□□□□ -1.4
ATXN3-208ENST00000504047 KIFC2Q96AC6 838 aa6.3□□□□□ -1.4
ATXN3-208ENST00000504047 SIRT1Q96EB6 747 aa6.3□□□□□ -1.4
ATXN3-208ENST00000504047 CALR3Q96L12 384 aaKnown RBP6.3□□□□□ -1.4
ATXN3-208ENST00000504047 TSEN34Q9BSV6 310 aaKnown RBP6.3□□□□□ -1.4
ATXN3-208ENST00000504047 LCE2BO14633 110 aa6.29□□□□□ -1.4
ATXN3-208ENST00000504047 BMP1P13497 986 aa6.29□□□□□ -1.4
ATXN3-208ENST00000504047 ERVK-9P63128 1117 aa6.29□□□□□ -1.4
ATXN3-208ENST00000504047 USP4Q13107 963 aa6.29□□□□□ -1.4
ATXN3-208ENST00000504047 CBLBQ13191 982 aa6.29□□□□□ -1.4
ATXN3-208ENST00000504047 LINC00528Q8N1L1 170 aa6.29□□□□□ -1.4
ATXN3-208ENST00000504047 NFATC2IPQ8NCF5 419 aa6.29□□□□□ -1.4
ATXN3-208ENST00000504047 ADH1AP07327 375 aa6.28□□□□□ -1.4
ATXN3-208ENST00000504047 BMP2P12643 396 aa6.28□□□□□ -1.4
ATXN3-208ENST00000504047 SKIP12755 728 aa6.28□□□□□ -1.4
ATXN3-208ENST00000504047 OXLD1Q5BKU9 147 aa6.28□□□□□ -1.4
ATXN3-208ENST00000504047 CYP2U1Q7Z449 544 aa6.28□□□□□ -1.4
ATXN3-208ENST00000504047 PLPP7Q8NBV4 271 aa6.28□□□□□ -1.4
ATXN3-208ENST00000504047 CCDC85AQ96PX6 553 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-208ENST00000504047 PURBQ96QR8 312 aaKnown RBP6.28□□□□□ -1.4
ATXN3-208ENST00000504047 DACH1Q9UI36 760 aa6.28□□□□□ -1.4
ATXN3-208ENST00000504047 ATP5J2-PTCD1G3V325 749 aa6.27□□□□□ -1.41
ATXN3-208ENST00000504047 LZTS3O60299 673 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-208ENST00000504047 LILRA1O75019 489 aa6.27□□□□□ -1.41
ATXN3-208ENST00000504047 C6orf118Q5T5N4 469 aa6.27□□□□□ -1.41
ATXN3-208ENST00000504047 ZNF787Q6DD87 383 aa6.27□□□□□ -1.41
ATXN3-208ENST00000504047 TRIM46Q7Z4K8 759 aa6.27□□□□□ -1.41
ATXN3-208ENST00000504047 CHIC2Q9UKJ5 165 aa6.27□□□□□ -1.41
ATXN3-208ENST00000504047 ZNF777Q9ULD5 760 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-208ENST00000504047 C11orf95C9JLR9 678 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-208ENST00000504047 RELBQ01201 579 aa6.26□□□□□ -1.41
ATXN3-208ENST00000504047 EML3Q32P44 896 aa6.26□□□□□ -1.41
ATXN3-208ENST00000504047 ADAMTS19Q8TE59 1207 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms