RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 XRCC6P12956 609 aaKnown RBP eCLIP18.75■□□□□ 0.59
SNF8-203ENST00000504000 CPSF1Q10570 1443 aaKnown RBP18.75■□□□□ 0.59
SNF8-203ENST00000504000 LNPKQ9C0E8 428 aa18.74■□□□□ 0.59
SNF8-203ENST00000504000 MRE11P49959 708 aa18.73■□□□□ 0.59
SNF8-203ENST00000504000 LMOD3Q0VAK6 560 aa18.73■□□□□ 0.59
SNF8-203ENST00000504000 EDC4Q6P2E9 1401 aaKnown RBP18.73■□□□□ 0.59
SNF8-203ENST00000504000 IL13P35225 146 aa18.71■□□□□ 0.59
SNF8-203ENST00000504000 MAP2P11137 1827 aaKnown RBP18.71■□□□□ 0.59
SNF8-203ENST00000504000 SETD1AO15047 1707 aaKnown RBP18.71■□□□□ 0.59
SNF8-203ENST00000504000 SKOR2Q2VWA4 1001 aaPredicted RBP18.71■□□□□ 0.59
SNF8-203ENST00000504000 SPRYD3Q8NCJ5 442 aa18.71■□□□□ 0.59
SNF8-203ENST00000504000 KIF2CQ99661 725 aa18.71■□□□□ 0.59
SNF8-203ENST00000504000 API5Q9BZZ5 524 aaKnown RBP18.71■□□□□ 0.59
SNF8-203ENST00000504000 PHACTR3Q96KR7 559 aa18.7■□□□□ 0.58
SNF8-203ENST00000504000 RAB3GAP1Q15042 981 aa18.69■□□□□ 0.58
SNF8-203ENST00000504000 ANKRD45Q5TZF3 282 aa18.69■□□□□ 0.58
SNF8-203ENST00000504000 GBP4Q96PP9 640 aa18.69■□□□□ 0.58
SNF8-203ENST00000504000 AGLP35573 1532 aa18.69■□□□□ 0.58
SNF8-203ENST00000504000 CLEC17AQ6ZS10 378 aa18.68■□□□□ 0.58
SNF8-203ENST00000504000 RIMBP3CA6NJZ7 1639 aa18.68■□□□□ 0.58
SNF8-203ENST00000504000 RIMBP3BA6NNM3 1639 aa18.68■□□□□ 0.58
SNF8-203ENST00000504000 RIMBP3Q9UFD9 1639 aa18.68■□□□□ 0.58
SNF8-203ENST00000504000 A2ML1A8K2U0 1454 aa18.67■□□□□ 0.58
SNF8-203ENST00000504000 HAP1P54257 671 aaPredicted RBP18.67■□□□□ 0.58
SNF8-203ENST00000504000 SIRT2Q8IXJ6 389 aa18.67■□□□□ 0.58
SNF8-203ENST00000504000 SIRT1Q96EB6 747 aa18.67■□□□□ 0.58
SNF8-203ENST00000504000 MBIPQ9NS73 344 aa18.67■□□□□ 0.58
SNF8-203ENST00000504000 SPATA31D1Q6ZQQ2 1576 aa18.67■□□□□ 0.58
SNF8-203ENST00000504000 HSP90AB1P08238 724 aaKnown RBP18.66■□□□□ 0.58
SNF8-203ENST00000504000 TWISTNBQ3B726 338 aaPredicted RBP18.66■□□□□ 0.58
SNF8-203ENST00000504000 TBC1D9Q6ZT07 1266 aa18.66■□□□□ 0.58
SNF8-203ENST00000504000 TNPO1Q92973 898 aaKnown RBP18.66■□□□□ 0.58
SNF8-203ENST00000504000 K7ELQ4 463 aaPredicted RBP18.65■□□□□ 0.58
SNF8-203ENST00000504000 FBXO31Q5XUX0 539 aaPredicted RBP18.65■□□□□ 0.58
SNF8-203ENST00000504000 TSPYL6Q8N831 410 aa18.65■□□□□ 0.58
SNF8-203ENST00000504000 RRAGDQ9NQL2 400 aaPredicted RBP18.65■□□□□ 0.58
SNF8-203ENST00000504000 CDC45O75419 566 aa18.65■□□□□ 0.58
SNF8-203ENST00000504000 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.65■□□□□ 0.58
SNF8-203ENST00000504000 WASLO00401 505 aaPredicted RBP18.64■□□□□ 0.57
SNF8-203ENST00000504000 STAG3Q9UJ98 1225 aa18.64■□□□□ 0.57
SNF8-203ENST00000504000 RIMS2Q9UQ26 1411 aa18.64■□□□□ 0.57
SNF8-203ENST00000504000 HMOX1P09601 288 aa18.63■□□□□ 0.57
SNF8-203ENST00000504000 CLCN1P35523 988 aa18.63■□□□□ 0.57
SNF8-203ENST00000504000 DCTPP1Q9H773 170 aa18.63■□□□□ 0.57
SNF8-203ENST00000504000 GRPEL1Q9HAV7 217 aa18.63■□□□□ 0.57
SNF8-203ENST00000504000 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.63■□□□□ 0.57
SNF8-203ENST00000504000 MON2Q7Z3U7 1717 aa18.63■□□□□ 0.57
SNF8-203ENST00000504000 INTS3Q68E01 1043 aaKnown RBP18.63■□□□□ 0.57
SNF8-203ENST00000504000 GZF1Q9H116 711 aaPredicted RBP18.62■□□□□ 0.57
SNF8-203ENST00000504000 EMILIN1Q9Y6C2 1016 aa18.62■□□□□ 0.57
SNF8-203ENST00000504000 DLG5Q8TDM6 1919 aa18.61■□□□□ 0.57
SNF8-203ENST00000504000 TECPR2O15040 1411 aa18.61■□□□□ 0.57
SNF8-203ENST00000504000 WAPLQ7Z5K2 1190 aa18.61■□□□□ 0.57
SNF8-203ENST00000504000 KNDC1Q76NI1 1749 aa18.6■□□□□ 0.57
SNF8-203ENST00000504000 C8orf58Q8NAV2 365 aa18.6■□□□□ 0.57
SNF8-203ENST00000504000 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.6■□□□□ 0.57
SNF8-203ENST00000504000 COG3Q96JB2 828 aa18.6■□□□□ 0.57
SNF8-203ENST00000504000 THUMPD2Q9BTF0 503 aaKnown RBP18.6■□□□□ 0.57
SNF8-203ENST00000504000 NRKQ7Z2Y5 1582 aa18.6■□□□□ 0.57
SNF8-203ENST00000504000 IBTKQ9P2D0 1353 aaPredicted RBP18.59■□□□□ 0.57
SNF8-203ENST00000504000 RPAP2Q8IXW5 612 aaPredicted RBP18.59■□□□□ 0.57
SNF8-203ENST00000504000 KIAA0232Q92628 1395 aa18.59■□□□□ 0.57
SNF8-203ENST00000504000 C3P01024 1663 aa18.59■□□□□ 0.57
SNF8-203ENST00000504000 RABEP1Q15276 862 aa18.58■□□□□ 0.57
SNF8-203ENST00000504000 PLEKHM2Q8IWE5 1019 aa18.58■□□□□ 0.57
SNF8-203ENST00000504000 PANK2Q9BZ23 570 aa18.58■□□□□ 0.57
SNF8-203ENST00000504000 C1orf115Q9H7X2 142 aa18.58■□□□□ 0.57
SNF8-203ENST00000504000 CCDC61Q9Y6R9 512 aa18.58■□□□□ 0.57
SNF8-203ENST00000504000 NRXN3Q9Y4C0 1643 aa18.58■□□□□ 0.57
SNF8-203ENST00000504000 FBLN1P23142 703 aa18.58■□□□□ 0.56
SNF8-203ENST00000504000 NME9Q86XW9 330 aa18.58■□□□□ 0.56
SNF8-203ENST00000504000 AKAP12Q02952 1782 aa18.58■□□□□ 0.56
SNF8-203ENST00000504000 HSP90AA1P07900 732 aaKnown RBP18.57■□□□□ 0.56
SNF8-203ENST00000504000 ANKRD44Q8N8A2 993 aa18.57■□□□□ 0.56
SNF8-203ENST00000504000 GOLGA6L22H0YM25 854 aa18.56■□□□□ 0.56
SNF8-203ENST00000504000 CD2BP2O95400 341 aaKnown RBP18.56■□□□□ 0.56
SNF8-203ENST00000504000 GSPT1P15170 499 aaKnown RBP18.56■□□□□ 0.56
SNF8-203ENST00000504000 TTC22Q5TAA0 569 aa18.56■□□□□ 0.56
SNF8-203ENST00000504000 NUDT16Q96DE0 195 aaKnown RBP18.56■□□□□ 0.56
SNF8-203ENST00000504000 PTPRCP08575 1304 aa18.56■□□□□ 0.56
SNF8-203ENST00000504000 CPS1P31327 1500 aa18.55■□□□□ 0.56
SNF8-203ENST00000504000 ATP10DQ9P241 1426 aa18.55■□□□□ 0.56
SNF8-203ENST00000504000 RGS12O14924 1447 aa18.54■□□□□ 0.56
SNF8-203ENST00000504000 ELL2O00472 640 aaPredicted RBP18.54■□□□□ 0.56
SNF8-203ENST00000504000 CHL1O00533 1208 aa18.54■□□□□ 0.56
SNF8-203ENST00000504000 SENP3Q9H4L4 574 aaPredicted RBP18.53■□□□□ 0.56
SNF8-203ENST00000504000 ITSN1Q15811 1721 aa18.53■□□□□ 0.56
SNF8-203ENST00000504000 NUCB2P80303 420 aa18.52■□□□□ 0.56
SNF8-203ENST00000504000 KLHL40Q2TBA0 621 aa18.52■□□□□ 0.56
SNF8-203ENST00000504000 USP26Q9BXU7 913 aa18.52■□□□□ 0.56
SNF8-203ENST00000504000 HDGFP51858 240 aaKnown RBP18.52■□□□□ 0.55
SNF8-203ENST00000504000 GAS2L2Q8NHY3 880 aa18.52■□□□□ 0.55
SNF8-203ENST00000504000 CWC22Q9HCG8 908 aaKnown RBP18.51■□□□□ 0.55
SNF8-203ENST00000504000 METP08581 1390 aa18.51■□□□□ 0.55
SNF8-203ENST00000504000 CASC1Q6TDU7 716 aa18.5■□□□□ 0.55
SNF8-203ENST00000504000 RBM42Q9BTD8 480 aaKnown RBP18.5■□□□□ 0.55
SNF8-203ENST00000504000 CEP85Q6P2H3 762 aa18.5■□□□□ 0.55
SNF8-203ENST00000504000 FAM83GA6ND36 823 aa18.49■□□□□ 0.55
SNF8-203ENST00000504000 ESPNB1AK53 854 aa18.49■□□□□ 0.55
SNF8-203ENST00000504000 BAG4O95429 457 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms