RNA–Protein interactions for RNA: ENST00000503613.5

FBXO38-206, Transcript of F-box protein 38, human

TSL 3

Gene FBXO38, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXO38-206	ENST00000503613	XIRP1	Q702N8	1843 aa	Known RBP	13.91	□□□□□ -0.18
FBXO38-206	ENST00000503613	MAP3K19	Q56UN5	1328 aa		13.9	□□□□□ -0.18
FBXO38-206	ENST00000503613	NLRP6	P59044	892 aa		13.9	□□□□□ -0.18
FBXO38-206	ENST00000503613	LMOD3	Q0VAK6	560 aa		13.9	□□□□□ -0.18
FBXO38-206	ENST00000503613	C14orf37	Q86TY3	774 aa		13.9	□□□□□ -0.18
FBXO38-206	ENST00000503613	ARHGEF10	O15013	1369 aa		13.9	□□□□□ -0.18
FBXO38-206	ENST00000503613	FANCI	Q9NVI1	1328 aa		13.9	□□□□□ -0.19
FBXO38-206	ENST00000503613	BCAR3	O75815	825 aa		13.89	□□□□□ -0.19
FBXO38-206	ENST00000503613	RARS	P54136	660 aa	Known RBP	13.89	□□□□□ -0.19
FBXO38-206	ENST00000503613	PDE3A	Q14432	1141 aa		13.89	□□□□□ -0.19
FBXO38-206	ENST00000503613	C20orf194	Q5TEA3	1177 aa		13.89	□□□□□ -0.19
FBXO38-206	ENST00000503613	PHACTR3	Q96KR7	559 aa		13.89	□□□□□ -0.19
FBXO38-206	ENST00000503613	DCC	P43146	1447 aa		13.89	□□□□□ -0.19
FBXO38-206	ENST00000503613	ABTB2	Q8N961	1025 aa		13.88	□□□□□ -0.19
FBXO38-206	ENST00000503613	NFAT5	O94916	1531 aa		13.88	□□□□□ -0.19
FBXO38-206	ENST00000503613	RTL1	A6NKG5	1358 aa		13.87	□□□□□ -0.19
FBXO38-206	ENST00000503613	AMPH	P49418	695 aa		13.87	□□□□□ -0.19
FBXO38-206	ENST00000503613	PSME1	Q06323	249 aa		13.87	□□□□□ -0.19
FBXO38-206	ENST00000503613	HSP90AB2P	Q58FF8	381 aa		13.87	□□□□□ -0.19
FBXO38-206	ENST00000503613	ESCO1	Q5FWF5	840 aa		13.87	□□□□□ -0.19
FBXO38-206	ENST00000503613	RBM33	Q96EV2	1170 aa	Known RBP	13.87	□□□□□ -0.19
FBXO38-206	ENST00000503613	C19orf44	Q9H6X5	657 aa		13.87	□□□□□ -0.19
FBXO38-206	ENST00000503613	ALS2	Q96Q42	1657 aa		13.87	□□□□□ -0.19
FBXO38-206	ENST00000503613	PAK3	O75914	559 aa	Predicted RBP	13.86	□□□□□ -0.19
FBXO38-206	ENST00000503613	C1orf167	Q5SNV9	1468 aa		13.86	□□□□□ -0.19
FBXO38-206	ENST00000503613	SLIT3	O75094	1523 aa		13.85	□□□□□ -0.19
FBXO38-206	ENST00000503613	KDR	P35968	1356 aa		13.85	□□□□□ -0.19
FBXO38-206	ENST00000503613	SULT6B1	Q6IMI4	303 aa		13.85	□□□□□ -0.19
FBXO38-206	ENST00000503613	TSR2	Q969E8	191 aa	Known RBP	13.85	□□□□□ -0.19
FBXO38-206	ENST00000503613	LMTK3	Q96Q04	1460 aa		13.85	□□□□□ -0.19
FBXO38-206	ENST00000503613	RGPD2	P0DJD1	1756 aa		13.84	□□□□□ -0.19
FBXO38-206	ENST00000503613	MST1R	Q04912	1400 aa		13.84	□□□□□ -0.19
FBXO38-206	ENST00000503613	SOX12	O15370	315 aa		13.84	□□□□□ -0.19
FBXO38-206	ENST00000503613	CANX	P27824	592 aa	Known RBP	13.84	□□□□□ -0.19
FBXO38-206	ENST00000503613	GNAI1	P63096	354 aa		13.84	□□□□□ -0.19
FBXO38-206	ENST00000503613	EXOSC9	Q06265	439 aa	Known RBP	13.84	□□□□□ -0.19
FBXO38-206	ENST00000503613	IFT57	Q9NWB7	429 aa		13.84	□□□□□ -0.19
FBXO38-206	ENST00000503613	AAMP	Q13685	434 aa		13.83	□□□□□ -0.2
FBXO38-206	ENST00000503613	AEBP1	Q8IUX7	1158 aa		13.83	□□□□□ -0.2
FBXO38-206	ENST00000503613	KCNH5	Q8NCM2	988 aa		13.83	□□□□□ -0.2
FBXO38-206	ENST00000503613	ZNF428	Q96B54	188 aa		13.83	□□□□□ -0.2
FBXO38-206	ENST00000503613	IGSF1	Q8N6C5	1336 aa		13.83	□□□□□ -0.2
FBXO38-206	ENST00000503613	VIRMA	Q69YN4	1812 aa	Known RBP	13.83	□□□□□ -0.2
FBXO38-206	ENST00000503613	TMEM94	Q12767	1356 aa		13.83	□□□□□ -0.2
FBXO38-206	ENST00000503613	RGPD5	Q99666	1765 aa		13.82	□□□□□ -0.2
FBXO38-206	ENST00000503613	ZNF853	P0CG23	659 aa		13.82	□□□□□ -0.2
FBXO38-206	ENST00000503613	MS4A1	P11836	297 aa		13.82	□□□□□ -0.2
FBXO38-206	ENST00000503613	HOXC9	P31274	260 aa		13.82	□□□□□ -0.2
FBXO38-206	ENST00000503613	ORAI2	Q96SN7	254 aa		13.82	□□□□□ -0.2
FBXO38-206	ENST00000503613	CACNA1F	O60840	1977 aa		13.82	□□□□□ -0.2
FBXO38-206	ENST00000503613	KDM4F	A0A1W2PPD8	638 aa		13.81	□□□□□ -0.2
FBXO38-206	ENST00000503613	ATF3	P18847	181 aa		13.81	□□□□□ -0.2
FBXO38-206	ENST00000503613	NUTM2G	Q5VZR2	741 aa		13.81	□□□□□ -0.2
FBXO38-206	ENST00000503613	LRRC37A3	O60309	1634 aa		13.81	□□□□□ -0.2
FBXO38-206	ENST00000503613	ALDH1L2	Q3SY69	923 aa		13.8	□□□□□ -0.2
FBXO38-206	ENST00000503613	EYA1	Q99502	592 aa		13.8	□□□□□ -0.2
FBXO38-206	ENST00000503613	CAMTA1	Q9Y6Y1	1673 aa		13.79	□□□□□ -0.2
FBXO38-206	ENST00000503613	FOXO3	O43524	673 aa		13.79	□□□□□ -0.2
FBXO38-206	ENST00000503613	HSPA2	P54652	639 aa		13.79	□□□□□ -0.2
FBXO38-206	ENST00000503613	ZKSCAN2	Q63HK3	967 aa		13.79	□□□□□ -0.2
FBXO38-206	ENST00000503613	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.79	□□□□□ -0.2
FBXO38-206	ENST00000503613	IP6K1	Q92551	441 aa		13.79	□□□□□ -0.2
FBXO38-206	ENST00000503613	FRAT1	Q92837	279 aa	Predicted RBP	13.79	□□□□□ -0.2
FBXO38-206	ENST00000503613	CFAP44	Q96MT7	982 aa		13.79	□□□□□ -0.2
FBXO38-206	ENST00000503613	CRYBG1	Q9Y4K1	1723 aa		13.78	□□□□□ -0.2
FBXO38-206	ENST00000503613	BRPF1	P55201	1214 aa	Predicted RBP	13.78	□□□□□ -0.2
FBXO38-206	ENST00000503613	KRT28	Q7Z3Y7	464 aa		13.78	□□□□□ -0.2
FBXO38-206	ENST00000503613	CADPS2	Q86UW7	1296 aa		13.78	□□□□□ -0.2
FBXO38-206	ENST00000503613	SSH1	Q8WYL5	1049 aa		13.78	□□□□□ -0.2
FBXO38-206	ENST00000503613	THUMPD2	Q9BTF0	503 aa	Known RBP	13.78	□□□□□ -0.2
FBXO38-206	ENST00000503613	SMC4	Q9NTJ3	1288 aa		13.78	□□□□□ -0.2
FBXO38-206	ENST00000503613	USP19	O94966	1318 aa		13.78	□□□□□ -0.2
FBXO38-206	ENST00000503613	KDM2B	Q8NHM5	1336 aa		13.78	□□□□□ -0.2
FBXO38-206	ENST00000503613	MSH6	P52701	1360 aa		13.77	□□□□□ -0.21
FBXO38-206	ENST00000503613	GAS2L2	Q8NHY3	880 aa		13.77	□□□□□ -0.21
FBXO38-206	ENST00000503613	PANK1	Q8TE04	598 aa		13.77	□□□□□ -0.21
FBXO38-206	ENST00000503613	KIF16B	Q96L93	1317 aa		13.77	□□□□□ -0.21
FBXO38-206	ENST00000503613	BCL2L13	Q9BXK5	485 aa		13.77	□□□□□ -0.21
FBXO38-206	ENST00000503613	LAS1L	Q9Y4W2	734 aa	Known RBP	13.77	□□□□□ -0.21
FBXO38-206	ENST00000503613	LMO7	Q8WWI1	1683 aa		13.76	□□□□□ -0.21
FBXO38-206	ENST00000503613	IPO8	O15397	1037 aa	Known RBP	13.76	□□□□□ -0.21
FBXO38-206	ENST00000503613	HTATSF1	O43719	755 aa	Known RBP	13.76	□□□□□ -0.21
FBXO38-206	ENST00000503613	MBIP	Q9NS73	344 aa		13.76	□□□□□ -0.21
FBXO38-206	ENST00000503613	RBM19	Q9Y4C8	960 aa	Known RBP	13.76	□□□□□ -0.21
FBXO38-206	ENST00000503613	FAM208A	Q9UK61	1670 aa	Known RBP	13.75	□□□□□ -0.21
FBXO38-206	ENST00000503613	FAM83G	A6ND36	823 aa		13.75	□□□□□ -0.21
FBXO38-206	ENST00000503613	TCERG1	O14776	1098 aa	Known RBP	13.75	□□□□□ -0.21
FBXO38-206	ENST00000503613	VAMP4	O75379	141 aa		13.75	□□□□□ -0.21
FBXO38-206	ENST00000503613	CLUAP1	Q96AJ1	413 aa		13.75	□□□□□ -0.21
FBXO38-206	ENST00000503613	COG6	Q9Y2V7	657 aa		13.75	□□□□□ -0.21
FBXO38-206	ENST00000503613	COL18A1	P39060	1754 aa		13.75	□□□□□ -0.21
FBXO38-206	ENST00000503613	MED1	Q15648	1581 aa	Predicted RBP	13.75	□□□□□ -0.21
FBXO38-206	ENST00000503613	CRB1	P82279	1406 aa		13.74	□□□□□ -0.21
FBXO38-206	ENST00000503613	CHL1	O00533	1208 aa		13.74	□□□□□ -0.21
FBXO38-206	ENST00000503613	GC	P02774	474 aa		13.74	□□□□□ -0.21
FBXO38-206	ENST00000503613	RLBP1	P12271	317 aa		13.74	□□□□□ -0.21
FBXO38-206	ENST00000503613	HAP1	P54257	671 aa	Predicted RBP	13.74	□□□□□ -0.21
FBXO38-206	ENST00000503613	ATF7IP	Q6VMQ6	1270 aa		13.74	□□□□□ -0.21
FBXO38-206	ENST00000503613	DZIP1L	Q8IYY4	767 aa	Known RBP	13.74	□□□□□ -0.21
FBXO38-206	ENST00000503613	ABCC6	O95255	1503 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms