RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 ANKRD23Q86SG2 305 aa8.14□□□□□ -1.11
CLCN3-203ENST00000502998 FAM210AQ96ND0 272 aa8.14□□□□□ -1.11
CLCN3-203ENST00000502998 STRCP1A6NGW2 1772 aa8.14□□□□□ -1.11
CLCN3-203ENST00000502998 TNRQ92752 1358 aa8.13□□□□□ -1.11
CLCN3-203ENST00000502998 LCE2DQ5TA82 110 aaPredicted RBP8.13□□□□□ -1.11
CLCN3-203ENST00000502998 CTR9Q6PD62 1173 aa8.13□□□□□ -1.11
CLCN3-203ENST00000502998 SGSM3Q96HU1 749 aa8.13□□□□□ -1.11
CLCN3-203ENST00000502998 SCUBE2Q9NQ36 999 aa8.13□□□□□ -1.11
CLCN3-203ENST00000502998 MTMR7Q9Y216 660 aa8.13□□□□□ -1.11
CLCN3-203ENST00000502998 RIPOR2Q9Y4F9 1068 aa8.13□□□□□ -1.11
CLCN3-203ENST00000502998 CPS1P31327 1500 aa8.13□□□□□ -1.11
CLCN3-203ENST00000502998 RNF17Q9BXT8 1623 aaKnown RBP8.12□□□□□ -1.11
CLCN3-203ENST00000502998 CCDC66A2RUB6 948 aa8.12□□□□□ -1.11
CLCN3-203ENST00000502998 KIF1CO43896 1103 aaKnown RBP8.12□□□□□ -1.11
CLCN3-203ENST00000502998 CCDC172P0C7W6 258 aa8.12□□□□□ -1.11
CLCN3-203ENST00000502998 ATN1P54259 1190 aaPredicted RBP8.12□□□□□ -1.11
CLCN3-203ENST00000502998 NFKBIBQ15653 356 aa8.12□□□□□ -1.11
CLCN3-203ENST00000502998 AEBP1Q8IUX7 1158 aa8.12□□□□□ -1.11
CLCN3-203ENST00000502998 SDR16C5Q8N3Y7 309 aa8.12□□□□□ -1.11
CLCN3-203ENST00000502998 ZNF428Q96B54 188 aa8.12□□□□□ -1.11
CLCN3-203ENST00000502998 NUB1Q9Y5A7 615 aa8.12□□□□□ -1.11
CLCN3-203ENST00000502998 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.11□□□□□ -1.11
CLCN3-203ENST00000502998 EIF2AK4Q9P2K8 1649 aaKnown RBP8.11□□□□□ -1.11
CLCN3-203ENST00000502998 POTEAQ6S8J7 498 aa8.11□□□□□ -1.11
CLCN3-203ENST00000502998 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.11□□□□□ -1.11
CLCN3-203ENST00000502998 MSL3Q8N5Y2 521 aaKnown RBP8.11□□□□□ -1.11
CLCN3-203ENST00000502998 ITFG2Q969R8 447 aa8.11□□□□□ -1.11
CLCN3-203ENST00000502998 PAIP2Q9BPZ3 127 aaKnown RBP8.11□□□□□ -1.11
CLCN3-203ENST00000502998 CCDC61Q9Y6R9 512 aa8.11□□□□□ -1.11
CLCN3-203ENST00000502998 ABCC3O15438 1527 aa8.11□□□□□ -1.11
CLCN3-203ENST00000502998 POLR1AO95602 1720 aaPredicted RBP8.11□□□□□ -1.11
CLCN3-203ENST00000502998 ZC3H13Q5T200 1668 aaKnown RBP8.11□□□□□ -1.11
CLCN3-203ENST00000502998 MROH1Q8NDA8 1641 aa8.11□□□□□ -1.11
CLCN3-203ENST00000502998 PTPN23Q9H3S7 1636 aa8.11□□□□□ -1.11
CLCN3-203ENST00000502998 DYNC1I1O14576 645 aa8.1□□□□□ -1.11
CLCN3-203ENST00000502998 ANP32CO43423 234 aa8.1□□□□□ -1.11
CLCN3-203ENST00000502998 BRPF1P55201 1214 aaPredicted RBP8.1□□□□□ -1.11
CLCN3-203ENST00000502998 FAM163AQ96GL9 167 aaPredicted RBP8.1□□□□□ -1.11
CLCN3-203ENST00000502998 NBPF3Q9H094 633 aa8.1□□□□□ -1.11
CLCN3-203ENST00000502998 TSPYL2Q9H2G4 693 aaPredicted RBP8.1□□□□□ -1.11
CLCN3-203ENST00000502998 CROCC2H7BZ55 1655 aa8.1□□□□□ -1.11
CLCN3-203ENST00000502998 ABCC5O15440 1437 aa8.1□□□□□ -1.11
CLCN3-203ENST00000502998 LRRC7Q96NW7 1537 aa8.09□□□□□ -1.11
CLCN3-203ENST00000502998 DUOX2Q9NRD8 1548 aa8.09□□□□□ -1.11
CLCN3-203ENST00000502998 NLRP1Q9C000 1473 aa8.09□□□□□ -1.11
CLCN3-203ENST00000502998 ERCC3P19447 782 aa8.09□□□□□ -1.11
CLCN3-203ENST00000502998 ARMCX6Q7L4S7 300 aa8.09□□□□□ -1.11
CLCN3-203ENST00000502998 CCDC125Q86Z20 511 aa8.09□□□□□ -1.11
CLCN3-203ENST00000502998 MPNDQ8N594 471 aa8.09□□□□□ -1.11
CLCN3-203ENST00000502998 MNS1Q8NEH6 495 aa8.09□□□□□ -1.11
CLCN3-203ENST00000502998 RNF217Q8TC41 542 aa8.09□□□□□ -1.11
CLCN3-203ENST00000502998 NCAPGQ9BPX3 1015 aa8.09□□□□□ -1.11
CLCN3-203ENST00000502998 UGGT1Q9NYU2 1555 aa8.09□□□□□ -1.11
CLCN3-203ENST00000502998 CEP152O94986 1710 aa8.09□□□□□ -1.11
CLCN3-203ENST00000502998 KIF16BQ96L93 1317 aa8.08□□□□□ -1.12
CLCN3-203ENST00000502998 MED14O60244 1454 aa8.08□□□□□ -1.12
CLCN3-203ENST00000502998 NEFHP12036 1026 aa8.08□□□□□ -1.12
CLCN3-203ENST00000502998 KIAA1211Q6ZU35 1233 aa8.08□□□□□ -1.12
CLCN3-203ENST00000502998 ZNF513Q8N8E2 541 aaPredicted RBP8.08□□□□□ -1.12
CLCN3-203ENST00000502998 KIF12Q96FN5 646 aa8.08□□□□□ -1.12
CLCN3-203ENST00000502998 BRMS1Q9HCU9 246 aa8.08□□□□□ -1.12
CLCN3-203ENST00000502998 SMC4Q9NTJ3 1288 aa8.08□□□□□ -1.12
CLCN3-203ENST00000502998 FGD6Q6ZV73 1430 aa8.08□□□□□ -1.12
CLCN3-203ENST00000502998 KIF15Q9NS87 1388 aa8.08□□□□□ -1.12
CLCN3-203ENST00000502998 ERVK-7P63135 1459 aa8.07□□□□□ -1.12
CLCN3-203ENST00000502998 NPHP4O75161 1426 aaPredicted RBP8.07□□□□□ -1.12
CLCN3-203ENST00000502998 DAPK1P53355 1430 aa8.07□□□□□ -1.12
CLCN3-203ENST00000502998 KIF3CO14782 793 aa8.07□□□□□ -1.12
CLCN3-203ENST00000502998 MFAP1P55081 439 aaKnown RBP8.07□□□□□ -1.12
CLCN3-203ENST00000502998 RIPK4P57078 832 aa8.07□□□□□ -1.12
CLCN3-203ENST00000502998 FOXD4L6Q3SYB3 417 aaPredicted RBP8.07□□□□□ -1.12
CLCN3-203ENST00000502998 FOXD4L3Q6VB84 417 aaPredicted RBP8.07□□□□□ -1.12
CLCN3-203ENST00000502998 THEMISQ8N1K5 641 aaPredicted RBP8.07□□□□□ -1.12
CLCN3-203ENST00000502998 RRP7BPQ9NSQ0 103 aa8.07□□□□□ -1.12
CLCN3-203ENST00000502998 CGNQ9P2M7 1197 aaKnown RBP8.07□□□□□ -1.12
CLCN3-203ENST00000502998 KIF3AQ9Y496 699 aa8.07□□□□□ -1.12
CLCN3-203ENST00000502998 PRDM15P57071 1507 aaPredicted RBP8.07□□□□□ -1.12
CLCN3-203ENST00000502998 ERBINQ96RT1 1412 aa8.06□□□□□ -1.12
CLCN3-203ENST00000502998 POTEFA5A3E0 1075 aa8.06□□□□□ -1.12
CLCN3-203ENST00000502998 TULP2O00295 520 aa8.06□□□□□ -1.12
CLCN3-203ENST00000502998 OFD1O75665 1012 aa8.06□□□□□ -1.12
CLCN3-203ENST00000502998 FOXD4L5Q5VV16 416 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-203ENST00000502998 ANKLE2Q86XL3 938 aa8.06□□□□□ -1.12
CLCN3-203ENST00000502998 FOXD4L4Q8WXT5 416 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-203ENST00000502998 ARHGEF1Q92888 912 aaKnown RBP8.06□□□□□ -1.12
CLCN3-203ENST00000502998 BMP2KQ9NSY1 1161 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-203ENST00000502998 DONSONQ9NYP3 566 aa8.06□□□□□ -1.12
CLCN3-203ENST00000502998 ISY1Q9ULR0 285 aaKnown RBP8.06□□□□□ -1.12
CLCN3-203ENST00000502998 DEPDC5O75140 1603 aa8.06□□□□□ -1.12
CLCN3-203ENST00000502998 XIRP1Q702N8 1843 aaKnown RBP8.06□□□□□ -1.12
CLCN3-203ENST00000502998 ZNF853P0CG23 659 aa8.05□□□□□ -1.12
CLCN3-203ENST00000502998 ZRSR2Q15696 482 aaKnown RBP8.05□□□□□ -1.12
CLCN3-203ENST00000502998 TIGD1Q96MW7 591 aa8.05□□□□□ -1.12
CLCN3-203ENST00000502998 MYH16Q9H6N6 1097 aa8.05□□□□□ -1.12
CLCN3-203ENST00000502998 IQGAP1P46940 1657 aa8.05□□□□□ -1.12
CLCN3-203ENST00000502998 ZBED9Q6R2W3 1325 aa8.04□□□□□ -1.12
CLCN3-203ENST00000502998 SETD1AO15047 1707 aaKnown RBP8.04□□□□□ -1.12
CLCN3-203ENST00000502998 UBR1Q8IWV7 1749 aa8.04□□□□□ -1.12
CLCN3-203ENST00000502998 POLD1P28340 1107 aa8.04□□□□□ -1.12
CLCN3-203ENST00000502998 UVSSAQ2YD98 709 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms