RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 CPSF1Q10570 1443 aaKnown RBP9.29□□□□□ -0.92
PDGFC-203ENST00000502773 CDC42BPGQ6DT37 1551 aa9.29□□□□□ -0.92
PDGFC-203ENST00000502773 IQSEC2Q5JU85 1478 aa9.29□□□□□ -0.92
PDGFC-203ENST00000502773 TRHP20396 242 aaPredicted RBP9.29□□□□□ -0.92
PDGFC-203ENST00000502773 PLEKHF1Q96S99 279 aa9.29□□□□□ -0.92
PDGFC-203ENST00000502773 ANKARQ7Z5J8 1434 aa9.28□□□□□ -0.92
PDGFC-203ENST00000502773 ANKRD26Q9UPS8 1709 aa9.28□□□□□ -0.92
PDGFC-203ENST00000502773 PTMSP20962 102 aa9.28□□□□□ -0.92
PDGFC-203ENST00000502773 CPS1P31327 1500 aa9.28□□□□□ -0.92
PDGFC-203ENST00000502773 KNDC1Q76NI1 1749 aa9.27□□□□□ -0.92
PDGFC-203ENST00000502773 STK31Q9BXU1 1019 aa9.27□□□□□ -0.92
PDGFC-203ENST00000502773 AMOTL2Q9Y2J4 779 aa9.27□□□□□ -0.92
PDGFC-203ENST00000502773 KCNH5Q8NCM2 988 aa9.27□□□□□ -0.93
PDGFC-203ENST00000502773 PTCH1Q13635 1447 aa9.27□□□□□ -0.93
PDGFC-203ENST00000502773 PANK1Q8TE04 598 aa9.27□□□□□ -0.93
PDGFC-203ENST00000502773 IL13P35225 146 aa9.26□□□□□ -0.93
PDGFC-203ENST00000502773 PTPRCP08575 1304 aa9.26□□□□□ -0.93
PDGFC-203ENST00000502773 ADGRB2O60241 1585 aa9.25□□□□□ -0.93
PDGFC-203ENST00000502773 TWISTNBQ3B726 338 aaPredicted RBP9.25□□□□□ -0.93
PDGFC-203ENST00000502773 RTL1A6NKG5 1358 aa9.25□□□□□ -0.93
PDGFC-203ENST00000502773 ACEP12821 1306 aa9.25□□□□□ -0.93
PDGFC-203ENST00000502773 C20orf194Q5TEA3 1177 aa9.25□□□□□ -0.93
PDGFC-203ENST00000502773 METP08581 1390 aa9.25□□□□□ -0.93
PDGFC-203ENST00000502773 ARHGEF10O15013 1369 aa9.25□□□□□ -0.93
PDGFC-203ENST00000502773 FLT4P35916 1363 aa9.25□□□□□ -0.93
PDGFC-203ENST00000502773 KIF20BQ96Q89 1820 aa9.24□□□□□ -0.93
PDGFC-203ENST00000502773 NME9Q86XW9 330 aa9.24□□□□□ -0.93
PDGFC-203ENST00000502773 NOB1Q9ULX3 412 aaKnown RBP9.24□□□□□ -0.93
PDGFC-203ENST00000502773 TRIM35Q9UPQ4 493 aa9.24□□□□□ -0.93
PDGFC-203ENST00000502773 KIAA0232Q92628 1395 aa9.24□□□□□ -0.93
PDGFC-203ENST00000502773 C14orf37Q86TY3 774 aa9.24□□□□□ -0.93
PDGFC-203ENST00000502773 RPAP2Q8IXW5 612 aaPredicted RBP9.24□□□□□ -0.93
PDGFC-203ENST00000502773 SSH1Q8WYL5 1049 aa9.24□□□□□ -0.93
PDGFC-203ENST00000502773 SBNO1A3KN83 1393 aa9.24□□□□□ -0.93
PDGFC-203ENST00000502773 SLIT1O75093 1534 aa9.24□□□□□ -0.93
PDGFC-203ENST00000502773 USP31Q70CQ4 1352 aa9.23□□□□□ -0.93
PDGFC-203ENST00000502773 CCT4P50991 539 aaKnown RBP9.23□□□□□ -0.93
PDGFC-203ENST00000502773 SPINK5Q9NQ38 1064 aaPredicted RBP9.22□□□□□ -0.93
PDGFC-203ENST00000502773 PDZRN3Q9UPQ7 1066 aa9.22□□□□□ -0.93
PDGFC-203ENST00000502773 COL3A1P02461 1466 aaPredicted RBP9.22□□□□□ -0.93
PDGFC-203ENST00000502773 HMOX1P09601 288 aa9.22□□□□□ -0.93
PDGFC-203ENST00000502773 ARID3AQ99856 593 aa9.22□□□□□ -0.93
PDGFC-203ENST00000502773 USP6P35125 1406 aa9.22□□□□□ -0.93
PDGFC-203ENST00000502773 CD163L1Q9NR16 1453 aa9.22□□□□□ -0.93
PDGFC-203ENST00000502773 NLRP6P59044 892 aa9.22□□□□□ -0.93
PDGFC-203ENST00000502773 CCDC30Q5VVM6 783 aa9.22□□□□□ -0.93
PDGFC-203ENST00000502773 SULT6B1Q6IMI4 303 aa9.22□□□□□ -0.93
PDGFC-203ENST00000502773 ARHGAP23Q9P227 1491 aa9.22□□□□□ -0.93
PDGFC-203ENST00000502773 TRIM27P14373 513 aa9.21□□□□□ -0.93
PDGFC-203ENST00000502773 PSME1Q06323 249 aa9.21□□□□□ -0.93
PDGFC-203ENST00000502773 SHPRHQ149N8 1683 aa9.21□□□□□ -0.93
PDGFC-203ENST00000502773 HSCBQ8IWL3 235 aa9.21□□□□□ -0.93
PDGFC-203ENST00000502773 TSR2Q969E8 191 aaKnown RBP9.21□□□□□ -0.93
PDGFC-203ENST00000502773 BCL11BQ9C0K0 894 aaPredicted RBP9.21□□□□□ -0.93
PDGFC-203ENST00000502773 GNAI3P08754 354 aa9.21□□□□□ -0.94
PDGFC-203ENST00000502773 EMILIN1Q9Y6C2 1016 aa9.21□□□□□ -0.94
PDGFC-203ENST00000502773 SMC5Q8IY18 1101 aa9.2□□□□□ -0.94
PDGFC-203ENST00000502773 MYO5BQ9ULV0 1848 aa9.2□□□□□ -0.94
PDGFC-203ENST00000502773 ADAMTS13Q76LX8 1427 aa9.2□□□□□ -0.94
PDGFC-203ENST00000502773 SLC26A8Q96RN1 970 aa9.2□□□□□ -0.94
PDGFC-203ENST00000502773 BCL2L13Q9BXK5 485 aa9.2□□□□□ -0.94
PDGFC-203ENST00000502773 NCLP19338 710 aaKnown RBP9.2□□□□□ -0.94
PDGFC-203ENST00000502773 ITSN1Q15811 1721 aa9.2□□□□□ -0.94
PDGFC-203ENST00000502773 VAMP4O75379 141 aa9.2□□□□□ -0.94
PDGFC-203ENST00000502773 ZNF853P0CG23 659 aa9.2□□□□□ -0.94
PDGFC-203ENST00000502773 AMOTQ4VCS5 1084 aa9.2□□□□□ -0.94
PDGFC-203ENST00000502773 PTPRUQ92729 1446 aa9.19□□□□□ -0.94
PDGFC-203ENST00000502773 MRPL50Q8N5N7 158 aaKnown RBP9.19□□□□□ -0.94
PDGFC-203ENST00000502773 PHF8Q9UPP1 1060 aa9.19□□□□□ -0.94
PDGFC-203ENST00000502773 ROBO2Q9HCK4 1378 aa9.19□□□□□ -0.94
PDGFC-203ENST00000502773 PLEKHO1Q53GL0 409 aaPredicted RBP9.19□□□□□ -0.94
PDGFC-203ENST00000502773 ABTB2Q8N961 1025 aa9.19□□□□□ -0.94
PDGFC-203ENST00000502773 ZBTB40Q9NUA8 1239 aa9.19□□□□□ -0.94
PDGFC-203ENST00000502773 TSPYL4Q9UJ04 414 aa9.19□□□□□ -0.94
PDGFC-203ENST00000502773 HSP90AB4PQ58FF6 505 aa9.19□□□□□ -0.94
PDGFC-203ENST00000502773 PAK3O75914 559 aaPredicted RBP9.18□□□□□ -0.94
PDGFC-203ENST00000502773 EIF4A2Q14240 407 aaKnown RBP9.18□□□□□ -0.94
PDGFC-203ENST00000502773 TMEM57Q8N5G2 664 aa9.18□□□□□ -0.94
PDGFC-203ENST00000502773 UBR1Q8IWV7 1749 aa9.18□□□□□ -0.94
PDGFC-203ENST00000502773 GNAT3A8MTJ3 354 aa9.18□□□□□ -0.94
PDGFC-203ENST00000502773 LTKP29376 864 aa9.18□□□□□ -0.94
PDGFC-203ENST00000502773 KIF13AQ9H1H9 1805 aa9.18□□□□□ -0.94
PDGFC-203ENST00000502773 GOLGA6L22H0YM25 854 aa9.18□□□□□ -0.94
PDGFC-203ENST00000502773 MSH5O43196 834 aa9.18□□□□□ -0.94
PDGFC-203ENST00000502773 MCCP23508 829 aa9.18□□□□□ -0.94
PDGFC-203ENST00000502773 RBM10P98175 930 aaKnown RBP9.18□□□□□ -0.94
PDGFC-203ENST00000502773 CHD1LQ86WJ1 897 aa9.18□□□□□ -0.94
PDGFC-203ENST00000502773 MBIPQ9NS73 344 aa9.18□□□□□ -0.94
PDGFC-203ENST00000502773 CHL1O00533 1208 aa9.17□□□□□ -0.94
PDGFC-203ENST00000502773 RRS1Q15050 365 aaKnown RBP9.17□□□□□ -0.94
PDGFC-203ENST00000502773 IGHDP01880 384 aa9.17□□□□□ -0.94
PDGFC-203ENST00000502773 HOXB7P09629 217 aa9.17□□□□□ -0.94
PDGFC-203ENST00000502773 C8orf34Q49A92 452 aa9.17□□□□□ -0.94
PDGFC-203ENST00000502773 LRRC7Q96NW7 1537 aa9.17□□□□□ -0.94
PDGFC-203ENST00000502773 BMP2KLQ5H9B9 411 aa9.17□□□□□ -0.94
PDGFC-203ENST00000502773 NUCB1Q02818 461 aa9.16□□□□□ -0.94
PDGFC-203ENST00000502773 C1orf141Q5JVX7 400 aa9.16□□□□□ -0.94
PDGFC-203ENST00000502773 ADGRL3Q9HAR2 1447 aa9.16□□□□□ -0.94
PDGFC-203ENST00000502773 ANKRD45Q5TZF3 282 aa9.16□□□□□ -0.94
PDGFC-203ENST00000502773 INTS3Q68E01 1043 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms