RNA–Protein interactions for RNA: ENST00000502479.1

LINC00939-201, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best) BASIC

Gene LINC00939, Length 4,972 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-201ENST00000502479 CCDC61Q9Y6R9 512 aa8.06□□□□□ -1.12
LINC00939-201ENST00000502479 GAS2L2Q8NHY3 880 aa8.05□□□□□ -1.12
LINC00939-201ENST00000502479 ANP32BQ92688 251 aaKnown RBP8.05□□□□□ -1.12
LINC00939-201ENST00000502479 C3P01024 1663 aa8.05□□□□□ -1.12
LINC00939-201ENST00000502479 CD163L1Q9NR16 1453 aa8.05□□□□□ -1.12
LINC00939-201ENST00000502479 LAS1LQ9Y4W2 734 aaKnown RBP8.05□□□□□ -1.12
LINC00939-201ENST00000502479 PIK3R4Q99570 1358 aa8.05□□□□□ -1.12
LINC00939-201ENST00000502479 PRKAR2BP31323 418 aa8.05□□□□□ -1.12
LINC00939-201ENST00000502479 THEMISQ8N1K5 641 aaPredicted RBP8.05□□□□□ -1.12
LINC00939-201ENST00000502479 BABAM1Q9NWV8 329 aa8.05□□□□□ -1.12
LINC00939-201ENST00000502479 SKOR2Q2VWA4 1001 aaPredicted RBP8.04□□□□□ -1.12
LINC00939-201ENST00000502479 RSPH6AQ9H0K4 717 aa8.04□□□□□ -1.12
LINC00939-201ENST00000502479 GSE1Q14687 1217 aa8.04□□□□□ -1.12
LINC00939-201ENST00000502479 MCCP23508 829 aa8.04□□□□□ -1.12
LINC00939-201ENST00000502479 GBP4Q96PP9 640 aa8.04□□□□□ -1.12
LINC00939-201ENST00000502479 KIAA0232Q92628 1395 aa8.04□□□□□ -1.12
LINC00939-201ENST00000502479 NRXN3Q9Y4C0 1643 aa8.03□□□□□ -1.12
LINC00939-201ENST00000502479 SLIT1O75093 1534 aa8.03□□□□□ -1.12
LINC00939-201ENST00000502479 ISY1Q9ULR0 285 aaKnown RBP8.03□□□□□ -1.12
LINC00939-201ENST00000502479 HSP90AA1P07900 732 aaKnown RBP8.02□□□□□ -1.12
LINC00939-201ENST00000502479 HSP90AB1P08238 724 aaKnown RBP8.02□□□□□ -1.12
LINC00939-201ENST00000502479 MLECQ14165 292 aa8.02□□□□□ -1.12
LINC00939-201ENST00000502479 FBXO31Q5XUX0 539 aaPredicted RBP8.02□□□□□ -1.12
LINC00939-201ENST00000502479 CFAP65Q6ZU64 1925 aaKnown RBP8.02□□□□□ -1.12
LINC00939-201ENST00000502479 TWISTNBQ3B726 338 aaPredicted RBP8.02□□□□□ -1.13
LINC00939-201ENST00000502479 STK31Q9BXU1 1019 aa8.02□□□□□ -1.13
LINC00939-201ENST00000502479 CCT4P50991 539 aaKnown RBP8.02□□□□□ -1.13
LINC00939-201ENST00000502479 CIZ1Q9ULV3 898 aaPredicted RBP8.02□□□□□ -1.13
LINC00939-201ENST00000502479 CDC45O75419 566 aa8.02□□□□□ -1.13
LINC00939-201ENST00000502479 IGHDP01880 384 aa8.02□□□□□ -1.13
LINC00939-201ENST00000502479 IL13P35225 146 aa8.02□□□□□ -1.13
LINC00939-201ENST00000502479 NUCB1Q02818 461 aa8.02□□□□□ -1.13
LINC00939-201ENST00000502479 MRPL50Q8N5N7 158 aaKnown RBP8.02□□□□□ -1.13
LINC00939-201ENST00000502479 C22orf23Q9BZE7 217 aa8.02□□□□□ -1.13
LINC00939-201ENST00000502479 CHMP5Q9NZZ3 219 aa8.02□□□□□ -1.13
LINC00939-201ENST00000502479 TRIM35Q9UPQ4 493 aa8.02□□□□□ -1.13
LINC00939-201ENST00000502479 CHD1LQ86WJ1 897 aa8.01□□□□□ -1.13
LINC00939-201ENST00000502479 RPAP2Q8IXW5 612 aaPredicted RBP8.01□□□□□ -1.13
LINC00939-201ENST00000502479 FER1L4A9Z1Z3 1794 aa8.01□□□□□ -1.13
LINC00939-201ENST00000502479 SBNO1A3KN83 1393 aa8.01□□□□□ -1.13
LINC00939-201ENST00000502479 FMN2Q9NZ56 1722 aa8.01□□□□□ -1.13
LINC00939-201ENST00000502479 NALCNQ8IZF0 1738 aa8.01□□□□□ -1.13
LINC00939-201ENST00000502479 PLEKHG3A1L390 1219 aa8.01□□□□□ -1.13
LINC00939-201ENST00000502479 PAK3O75914 559 aaPredicted RBP8.01□□□□□ -1.13
LINC00939-201ENST00000502479 POLKQ9UBT6 870 aa8.01□□□□□ -1.13
LINC00939-201ENST00000502479 TRIM27P14373 513 aa8□□□□□ -1.13
LINC00939-201ENST00000502479 TBC1D32Q96NH3 1257 aa8□□□□□ -1.13
LINC00939-201ENST00000502479 INTS3Q68E01 1043 aaKnown RBP8□□□□□ -1.13
LINC00939-201ENST00000502479 SSH1Q8WYL5 1049 aa8□□□□□ -1.13
LINC00939-201ENST00000502479 FLT4P35916 1363 aa8□□□□□ -1.13
LINC00939-201ENST00000502479 NFKBIBQ15653 356 aa8□□□□□ -1.13
LINC00939-201ENST00000502479 SPINK5Q9NQ38 1064 aaPredicted RBP8□□□□□ -1.13
LINC00939-201ENST00000502479 USP54Q70EL1 1684 aa8□□□□□ -1.13
LINC00939-201ENST00000502479 TSR2Q969E8 191 aaKnown RBP7.99□□□□□ -1.13
LINC00939-201ENST00000502479 USP6P35125 1406 aa7.99□□□□□ -1.13
LINC00939-201ENST00000502479 AMPHP49418 695 aa7.99□□□□□ -1.13
LINC00939-201ENST00000502479 BMP2KLQ5H9B9 411 aa7.99□□□□□ -1.13
LINC00939-201ENST00000502479 TXNDC2Q86VQ3 553 aa7.99□□□□□ -1.13
LINC00939-201ENST00000502479 SMC5Q8IY18 1101 aa7.99□□□□□ -1.13
LINC00939-201ENST00000502479 TMEM57Q8N5G2 664 aa7.99□□□□□ -1.13
LINC00939-201ENST00000502479 NGDNQ8NEJ9 315 aaKnown RBP7.99□□□□□ -1.13
LINC00939-201ENST00000502479 SNX21Q969T3 373 aa7.99□□□□□ -1.13
LINC00939-201ENST00000502479 BCL11AQ9H165 835 aa7.99□□□□□ -1.13
LINC00939-201ENST00000502479 USP31Q70CQ4 1352 aa7.99□□□□□ -1.13
LINC00939-201ENST00000502479 CCDC30Q5VVM6 783 aa7.99□□□□□ -1.13
LINC00939-201ENST00000502479 TBX22Q9Y458 520 aa7.99□□□□□ -1.13
LINC00939-201ENST00000502479 PTPRUQ92729 1446 aa7.99□□□□□ -1.13
LINC00939-201ENST00000502479 ADGRL3Q9HAR2 1447 aa7.99□□□□□ -1.13
LINC00939-201ENST00000502479 MFAP1P55081 439 aaKnown RBP7.99□□□□□ -1.13
LINC00939-201ENST00000502479 ABCC4O15439 1325 aa7.99□□□□□ -1.13
LINC00939-201ENST00000502479 ZBTB40Q9NUA8 1239 aa7.98□□□□□ -1.13
LINC00939-201ENST00000502479 REC8O95072 547 aa7.98□□□□□ -1.13
LINC00939-201ENST00000502479 SRCIN1Q9C0H9 1055 aa7.98□□□□□ -1.13
LINC00939-201ENST00000502479 PXDNLA1KZ92 1463 aa7.98□□□□□ -1.13
LINC00939-201ENST00000502479 ST18O60284 1047 aa7.97□□□□□ -1.13
LINC00939-201ENST00000502479 ANKRD45Q5TZF3 282 aa7.97□□□□□ -1.13
LINC00939-201ENST00000502479 WAPLQ7Z5K2 1190 aa7.97□□□□□ -1.13
LINC00939-201ENST00000502479 MAP2P11137 1827 aaKnown RBP7.97□□□□□ -1.13
LINC00939-201ENST00000502479 ARHGAP23Q9P227 1491 aa7.97□□□□□ -1.13
LINC00939-201ENST00000502479 GNAI3P08754 354 aa7.97□□□□□ -1.13
LINC00939-201ENST00000502479 BCL2L13Q9BXK5 485 aa7.97□□□□□ -1.13
LINC00939-201ENST00000502479 MBIPQ9NS73 344 aa7.97□□□□□ -1.13
LINC00939-201ENST00000502479 OVOS2A0A0J9YW53 1432 aa7.97□□□□□ -1.13
LINC00939-201ENST00000502479 OVOS2Q6IE36 1432 aa7.97□□□□□ -1.13
LINC00939-201ENST00000502479 ZNF853P0CG23 659 aa7.97□□□□□ -1.13
LINC00939-201ENST00000502479 RABEP1Q15276 862 aa7.97□□□□□ -1.13
LINC00939-201ENST00000502479 HSP90AB4PQ58FF6 505 aa7.97□□□□□ -1.13
LINC00939-201ENST00000502479 METP08581 1390 aa7.97□□□□□ -1.13
LINC00939-201ENST00000502479 MCM2P49736 904 aa7.97□□□□□ -1.13
LINC00939-201ENST00000502479 KCNH5Q8NCM2 988 aa7.97□□□□□ -1.13
LINC00939-201ENST00000502479 NME9Q86XW9 330 aa7.96□□□□□ -1.13
LINC00939-201ENST00000502479 HMOX1P09601 288 aa7.96□□□□□ -1.14
LINC00939-201ENST00000502479 GPATCH3Q96I76 525 aa7.96□□□□□ -1.14
LINC00939-201ENST00000502479 CWC22Q9HCG8 908 aaKnown RBP7.96□□□□□ -1.14
LINC00939-201ENST00000502479 ACEP12821 1306 aa7.96□□□□□ -1.14
LINC00939-201ENST00000502479 EPB41L2O43491 1005 aaKnown RBP7.95□□□□□ -1.14
LINC00939-201ENST00000502479 VAMP4O75379 141 aa7.95□□□□□ -1.14
LINC00939-201ENST00000502479 MSH6P52701 1360 aa7.95□□□□□ -1.14
LINC00939-201ENST00000502479 GOLGA6L3A6NEY3 463 aa7.95□□□□□ -1.14
LINC00939-201ENST00000502479 TSPYL4Q9UJ04 414 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms