RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 SLC6A16Q9GZN6 736 aa12.08□□□□□ -0.48
CRNDE-202ENST00000502066 NPHP4O75161 1426 aaPredicted RBP12.08□□□□□ -0.48
CRNDE-202ENST00000502066 FAM187AA6NFU0 413 aa12.07□□□□□ -0.48
CRNDE-202ENST00000502066 NWD1Q149M9 1564 aa12.07□□□□□ -0.48
CRNDE-202ENST00000502066 KDM5CP41229 1560 aa12.06□□□□□ -0.48
CRNDE-202ENST00000502066 GIGYF1O75420 1035 aaPredicted RBP12.06□□□□□ -0.48
CRNDE-202ENST00000502066 GDF9O60383 454 aa12.05□□□□□ -0.48
CRNDE-202ENST00000502066 DGAT1O75907 488 aa12.05□□□□□ -0.48
CRNDE-202ENST00000502066 PRR20EP86478 221 aa12.05□□□□□ -0.48
CRNDE-202ENST00000502066 PRR20CP86479 221 aa12.05□□□□□ -0.48
CRNDE-202ENST00000502066 PRR20DP86480 221 aa12.05□□□□□ -0.48
CRNDE-202ENST00000502066 PRR20BP86481 221 aa12.05□□□□□ -0.48
CRNDE-202ENST00000502066 PRR20AP86496 221 aa12.05□□□□□ -0.48
CRNDE-202ENST00000502066 COL13A1Q5TAT6 717 aaPredicted RBP12.05□□□□□ -0.48
CRNDE-202ENST00000502066 A2ML1A8K2U0 1454 aa12.05□□□□□ -0.48
CRNDE-202ENST00000502066 COL16A1Q07092 1604 aaPredicted RBP12.04□□□□□ -0.48
CRNDE-202ENST00000502066 OATP04181 439 aa12.04□□□□□ -0.48
CRNDE-202ENST00000502066 FECHP22830 423 aa12.04□□□□□ -0.48
CRNDE-202ENST00000502066 RBM26Q5T8P6 1007 aaKnown RBP12.04□□□□□ -0.48
CRNDE-202ENST00000502066 NLRP7Q8WX94 980 aa12.04□□□□□ -0.48
CRNDE-202ENST00000502066 FOXC1Q12948 553 aa12.02□□□□□ -0.49
CRNDE-202ENST00000502066 METTL3Q86U44 580 aaKnown RBP12.02□□□□□ -0.49
CRNDE-202ENST00000502066 SPSB2Q99619 263 aa12.02□□□□□ -0.49
CRNDE-202ENST00000502066 FGD6Q6ZV73 1430 aa12.02□□□□□ -0.49
CRNDE-202ENST00000502066 DIP2CQ9Y2E4 1556 aa12.01□□□□□ -0.49
CRNDE-202ENST00000502066 IQGAP1P46940 1657 aa12.01□□□□□ -0.49
CRNDE-202ENST00000502066 CAMTA1Q9Y6Y1 1673 aa12.01□□□□□ -0.49
CRNDE-202ENST00000502066 ST8SIA5O15466 376 aa12.01□□□□□ -0.49
CRNDE-202ENST00000502066 TNS4Q8IZW8 715 aa12.01□□□□□ -0.49
CRNDE-202ENST00000502066 BLMP54132 1417 aaPredicted RBP12.01□□□□□ -0.49
CRNDE-202ENST00000502066 MED14O60244 1454 aa12□□□□□ -0.49
CRNDE-202ENST00000502066 REREQ9P2R6 1566 aa12□□□□□ -0.49
CRNDE-202ENST00000502066 P3H3Q8IVL6 736 aa11.99□□□□□ -0.49
CRNDE-202ENST00000502066 RDH13Q8NBN7 331 aa11.99□□□□□ -0.49
CRNDE-202ENST00000502066 C8orf37Q96NL8 207 aa11.99□□□□□ -0.49
CRNDE-202ENST00000502066 SHPRHQ149N8 1683 aa11.99□□□□□ -0.49
CRNDE-202ENST00000502066 HIC1Q14526 733 aa11.98□□□□□ -0.49
CRNDE-202ENST00000502066 R3HDM1Q15032 1099 aaKnown RBP11.98□□□□□ -0.49
CRNDE-202ENST00000502066 SF3B2Q13435 895 aaKnown RBP11.97□□□□□ -0.49
CRNDE-202ENST00000502066 RSPH4AQ5TD94 716 aa11.97□□□□□ -0.49
CRNDE-202ENST00000502066 PKD2L1Q9P0L9 805 aa11.97□□□□□ -0.49
CRNDE-202ENST00000502066 CARMIL1Q5VZK9 1371 aa11.96□□□□□ -0.49
CRNDE-202ENST00000502066 CLTCQ00610 1675 aaKnown RBP11.96□□□□□ -0.5
CRNDE-202ENST00000502066 LRRC9Q6ZRR7 1453 aa11.95□□□□□ -0.5
CRNDE-202ENST00000502066 DDX11L8A8MPP1 907 aa11.95□□□□□ -0.5
CRNDE-202ENST00000502066 FUT2Q10981 343 aa11.95□□□□□ -0.5
CRNDE-202ENST00000502066 DEPDC5O75140 1603 aa11.95□□□□□ -0.5
CRNDE-202ENST00000502066 ABCC1P33527 1531 aa11.95□□□□□ -0.5
CRNDE-202ENST00000502066 ABCA6Q8N139 1617 aa11.94□□□□□ -0.5
CRNDE-202ENST00000502066 AAASQ9NRG9 546 aa11.94□□□□□ -0.5
CRNDE-202ENST00000502066 ITSN2Q9NZM3 1697 aa11.94□□□□□ -0.5
CRNDE-202ENST00000502066 MORN1Q5T089 497 aa11.93□□□□□ -0.5
CRNDE-202ENST00000502066 AFAP1Q8N556 730 aa11.93□□□□□ -0.5
CRNDE-202ENST00000502066 FCF1Q9Y324 198 aaKnown RBP11.93□□□□□ -0.5
CRNDE-202ENST00000502066 KDM5DQ9BY66 1539 aa11.92□□□□□ -0.5
CRNDE-202ENST00000502066 SCAF11Q99590 1463 aaKnown RBP11.92□□□□□ -0.5
CRNDE-202ENST00000502066 TESPA1A2RU30 521 aaPredicted RBP11.92□□□□□ -0.5
CRNDE-202ENST00000502066 GNPATO15228 680 aa11.92□□□□□ -0.5
CRNDE-202ENST00000502066 SLAIN2Q9P270 581 aa11.92□□□□□ -0.5
CRNDE-202ENST00000502066 DAXXQ9UER7 740 aaPredicted RBP11.92□□□□□ -0.5
CRNDE-202ENST00000502066 RTEL1-TNFRSF6BF6WH68 1400 aa11.92□□□□□ -0.5
CRNDE-202ENST00000502066 PLCH2O75038 1416 aa11.92□□□□□ -0.5
CRNDE-202ENST00000502066 CHD4Q14839 1912 aa11.92□□□□□ -0.5
CRNDE-202ENST00000502066 FAM160A2Q8N612 972 aaPredicted RBP11.91□□□□□ -0.5
CRNDE-202ENST00000502066 PRDM9Q9NQV7 894 aa11.91□□□□□ -0.5
CRNDE-202ENST00000502066 PPP1R1BQ9UD71 204 aaPredicted RBP11.91□□□□□ -0.5
CRNDE-202ENST00000502066 DACH1Q9UI36 760 aa11.91□□□□□ -0.5
CRNDE-202ENST00000502066 SLC27A5Q9Y2P5 690 aa11.91□□□□□ -0.5
CRNDE-202ENST00000502066 ADGBQ8N7X0 1667 aa11.91□□□□□ -0.5
CRNDE-202ENST00000502066 THEMISQ8N1K5 641 aaPredicted RBP11.9□□□□□ -0.5
CRNDE-202ENST00000502066 THAP11Q96EK4 314 aa11.9□□□□□ -0.5
CRNDE-202ENST00000502066 PHOX2BQ99453 314 aa11.9□□□□□ -0.5
CRNDE-202ENST00000502066 TMEM94Q12767 1356 aa11.9□□□□□ -0.5
CRNDE-202ENST00000502066 GPR37O15354 613 aa11.89□□□□□ -0.51
CRNDE-202ENST00000502066 ATP6V1AP38606 617 aa11.88□□□□□ -0.51
CRNDE-202ENST00000502066 ZNF518AQ6AHZ1 1483 aa11.88□□□□□ -0.51
CRNDE-202ENST00000502066 HSPA6P17066 643 aa11.87□□□□□ -0.51
CRNDE-202ENST00000502066 FMNL1O95466 1100 aaPredicted RBP11.86□□□□□ -0.51
CRNDE-202ENST00000502066 GCGRP47871 477 aa11.86□□□□□ -0.51
CRNDE-202ENST00000502066 RPIAP49247 311 aa11.86□□□□□ -0.51
CRNDE-202ENST00000502066 ZC3H13Q5T200 1668 aaKnown RBP11.85□□□□□ -0.51
CRNDE-202ENST00000502066 NINLQ9Y2I6 1382 aa11.85□□□□□ -0.51
CRNDE-202ENST00000502066 CD2BP2O95400 341 aaKnown RBP11.85□□□□□ -0.51
CRNDE-202ENST00000502066 SMYD5Q6GMV2 418 aa11.85□□□□□ -0.51
CRNDE-202ENST00000502066 TRPC5Q9UL62 973 aaPredicted RBP11.85□□□□□ -0.51
CRNDE-202ENST00000502066 CYP4X1Q8N118 509 aa11.84□□□□□ -0.51
CRNDE-202ENST00000502066 TOR4AQ9NXH8 423 aa11.84□□□□□ -0.51
CRNDE-202ENST00000502066 GOLGA3Q08378 1498 aa11.83□□□□□ -0.52
CRNDE-202ENST00000502066 UTRNP46939 3433 aa11.83□□□□□ -0.52
CRNDE-202ENST00000502066 MAP3K1Q13233 1512 aa11.83□□□□□ -0.52
CRNDE-202ENST00000502066 BRICD5Q6PL45 260 aa11.83□□□□□ -0.52
CRNDE-202ENST00000502066 RNF19BQ6ZMZ0 732 aa11.83□□□□□ -0.52
CRNDE-202ENST00000502066 USP21Q9UK80 565 aa11.83□□□□□ -0.52
CRNDE-202ENST00000502066 FAM9AQ8IZU1 332 aaPredicted RBP11.82□□□□□ -0.52
CRNDE-202ENST00000502066 KIF27Q86VH2 1401 aa11.82□□□□□ -0.52
CRNDE-202ENST00000502066 PLEKHD1A6NEE1 506 aa11.81□□□□□ -0.52
CRNDE-202ENST00000502066 BAG6P46379 1132 aa11.81□□□□□ -0.52
CRNDE-202ENST00000502066 LMOD2Q6P5Q4 547 aa11.81□□□□□ -0.52
CRNDE-202ENST00000502066 FAM135AQ9P2D6 1515 aa11.81□□□□□ -0.52
CRNDE-202ENST00000502066 TREML4Q6UXN2 200 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms