RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 FANCIQ9NVI1 1328 aa23.75■■□□□ 1.39
LINC00535-201ENST00000501400 NFE2L2Q16236 605 aa23.74■■□□□ 1.39
LINC00535-201ENST00000501400 TSHZ2Q9NRE2 1034 aa23.74■■□□□ 1.39
LINC00535-201ENST00000501400 KIF1AQ12756 1690 aa23.74■■□□□ 1.39
LINC00535-201ENST00000501400 TRPM3Q9HCF6 1732 aaPredicted RBP23.74■■□□□ 1.39
LINC00535-201ENST00000501400 NUTM2GQ5VZR2 741 aa23.74■■□□□ 1.39
LINC00535-201ENST00000501400 NFAT5O94916 1531 aa23.73■■□□□ 1.39
LINC00535-201ENST00000501400 LTN1O94822 1766 aa23.73■■□□□ 1.39
LINC00535-201ENST00000501400 C1orf167Q5SNV9 1468 aa23.73■■□□□ 1.39
LINC00535-201ENST00000501400 AEBP1Q8IUX7 1158 aa23.72■■□□□ 1.39
LINC00535-201ENST00000501400 ABTB2Q8N961 1025 aa23.72■■□□□ 1.39
LINC00535-201ENST00000501400 ORAI2Q96SN7 254 aa23.72■■□□□ 1.39
LINC00535-201ENST00000501400 PAK3O75914 559 aaPredicted RBP23.72■■□□□ 1.39
LINC00535-201ENST00000501400 TSR2Q969E8 191 aaKnown RBP23.72■■□□□ 1.39
LINC00535-201ENST00000501400 TMEM94Q12767 1356 aa23.71■■□□□ 1.39
LINC00535-201ENST00000501400 NEFMP07197 916 aa23.71■■□□□ 1.39
LINC00535-201ENST00000501400 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.71■■□□□ 1.39
LINC00535-201ENST00000501400 ARHGEF10O15013 1369 aa23.7■■□□□ 1.38
LINC00535-201ENST00000501400 KIF24Q5T7B8 1368 aa23.7■■□□□ 1.38
LINC00535-201ENST00000501400 DCCP43146 1447 aa23.69■■□□□ 1.38
LINC00535-201ENST00000501400 RARSP54136 660 aaKnown RBP23.69■■□□□ 1.38
LINC00535-201ENST00000501400 C19orf44Q9H6X5 657 aa23.69■■□□□ 1.38
LINC00535-201ENST00000501400 XIRP1Q702N8 1843 aaKnown RBP23.69■■□□□ 1.38
LINC00535-201ENST00000501400 MST1RQ04912 1400 aa23.69■■□□□ 1.38
LINC00535-201ENST00000501400 SULT6B1Q6IMI4 303 aa23.69■■□□□ 1.38
LINC00535-201ENST00000501400 NCOA3Q9Y6Q9 1424 aa23.68■■□□□ 1.38
LINC00535-201ENST00000501400 PHRF1Q9P1Y6 1649 aaKnown RBP23.67■■□□□ 1.38
LINC00535-201ENST00000501400 PSME1Q06323 249 aa23.67■■□□□ 1.38
LINC00535-201ENST00000501400 AMPHP49418 695 aa23.66■■□□□ 1.38
LINC00535-201ENST00000501400 KDRP35968 1356 aa23.66■■□□□ 1.38
LINC00535-201ENST00000501400 SLIT3O75094 1523 aa23.65■■□□□ 1.38
LINC00535-201ENST00000501400 RTL1A6NKG5 1358 aa23.65■■□□□ 1.38
LINC00535-201ENST00000501400 FOXO3O43524 673 aa23.65■■□□□ 1.38
LINC00535-201ENST00000501400 HOXC9P31274 260 aa23.65■■□□□ 1.38
LINC00535-201ENST00000501400 IGSF1Q8N6C5 1336 aa23.64■■□□□ 1.37
LINC00535-201ENST00000501400 EXOSC9Q06265 439 aaKnown RBP23.64■■□□□ 1.37
LINC00535-201ENST00000501400 THUMPD2Q9BTF0 503 aaKnown RBP23.64■■□□□ 1.37
LINC00535-201ENST00000501400 ALS2Q96Q42 1657 aa23.63■■□□□ 1.37
LINC00535-201ENST00000501400 CT47B1P0C2W7 299 aaPredicted RBP23.63■■□□□ 1.37
LINC00535-201ENST00000501400 XPCQ01831 940 aaPredicted RBP23.62■■□□□ 1.37
LINC00535-201ENST00000501400 EYA1Q99502 592 aa23.61■■□□□ 1.37
LINC00535-201ENST00000501400 BCL2L13Q9BXK5 485 aa23.61■■□□□ 1.37
LINC00535-201ENST00000501400 LMOD3Q0VAK6 560 aa23.59■■□□□ 1.37
LINC00535-201ENST00000501400 PDE3AQ14432 1141 aa23.59■■□□□ 1.37
LINC00535-201ENST00000501400 FAM83GA6ND36 823 aa23.59■■□□□ 1.37
LINC00535-201ENST00000501400 ZNF853P0CG23 659 aa23.58■■□□□ 1.37
LINC00535-201ENST00000501400 ATF3P18847 181 aa23.57■■□□□ 1.36
LINC00535-201ENST00000501400 IFT57Q9NWB7 429 aa23.57■■□□□ 1.36
LINC00535-201ENST00000501400 USP19O94966 1318 aa23.57■■□□□ 1.36
LINC00535-201ENST00000501400 CALD1Q05682 793 aaKnown RBP23.57■■□□□ 1.36
LINC00535-201ENST00000501400 DCTN1Q14203 1278 aa23.55■■□□□ 1.36
LINC00535-201ENST00000501400 KRT28Q7Z3Y7 464 aa23.55■■□□□ 1.36
LINC00535-201ENST00000501400 FRAT1Q92837 279 aaPredicted RBP23.55■■□□□ 1.36
LINC00535-201ENST00000501400 PANK1Q8TE04 598 aa23.55■■□□□ 1.36
LINC00535-201ENST00000501400 TNNQ9UQP3 1299 aa23.55■■□□□ 1.36
LINC00535-201ENST00000501400 CANXP27824 592 aaKnown RBP23.54■■□□□ 1.36
LINC00535-201ENST00000501400 KCNH5Q8NCM2 988 aa23.54■■□□□ 1.36
LINC00535-201ENST00000501400 GNAI1P63096 354 aa23.53■■□□□ 1.36
LINC00535-201ENST00000501400 MED1Q15648 1581 aaPredicted RBP23.53■■□□□ 1.36
LINC00535-201ENST00000501400 IP6K1Q92551 441 aa23.53■■□□□ 1.36
LINC00535-201ENST00000501400 LAS1LQ9Y4W2 734 aaKnown RBP23.53■■□□□ 1.36
LINC00535-201ENST00000501400 RGPD2P0DJD1 1756 aa23.53■■□□□ 1.36
LINC00535-201ENST00000501400 MSH6P52701 1360 aa23.53■■□□□ 1.36
LINC00535-201ENST00000501400 SSH1Q8WYL5 1049 aa23.53■■□□□ 1.36
LINC00535-201ENST00000501400 MBIPQ9NS73 344 aa23.53■■□□□ 1.36
LINC00535-201ENST00000501400 RLBP1P12271 317 aa23.52■■□□□ 1.36
LINC00535-201ENST00000501400 CADPS2Q86UW7 1296 aa23.52■■□□□ 1.36
LINC00535-201ENST00000501400 CFAP44Q96MT7 982 aa23.52■■□□□ 1.36
LINC00535-201ENST00000501400 LRRC37A3O60309 1634 aa23.52■■□□□ 1.35
LINC00535-201ENST00000501400 KDM2BQ8NHM5 1336 aa23.51■■□□□ 1.35
LINC00535-201ENST00000501400 MTHFSDQ2M296 383 aaKnown RBP23.51■■□□□ 1.35
LINC00535-201ENST00000501400 SMC4Q9NTJ3 1288 aa23.51■■□□□ 1.35
LINC00535-201ENST00000501400 GCP02774 474 aa23.5■■□□□ 1.35
LINC00535-201ENST00000501400 DDX17Q92841 729 aaKnown RBP23.49■■□□□ 1.35
LINC00535-201ENST00000501400 LTV1Q96GA3 475 aaPredicted RBP23.49■■□□□ 1.35
LINC00535-201ENST00000501400 COG6Q9Y2V7 657 aa23.49■■□□□ 1.35
LINC00535-201ENST00000501400 ZNF335Q9H4Z2 1342 aaPredicted RBP23.49■■□□□ 1.35
LINC00535-201ENST00000501400 PXDNQ92626 1479 aa23.49■■□□□ 1.35
LINC00535-201ENST00000501400 ARHGEF25Q86VW2 580 aa23.49■■□□□ 1.35
LINC00535-201ENST00000501400 CRB1P82279 1406 aa23.49■■□□□ 1.35
LINC00535-201ENST00000501400 CRYBG1Q9Y4K1 1723 aa23.48■■□□□ 1.35
LINC00535-201ENST00000501400 MCM10Q7L590 875 aa23.48■■□□□ 1.35
LINC00535-201ENST00000501400 CAMTA1Q9Y6Y1 1673 aa23.47■■□□□ 1.35
LINC00535-201ENST00000501400 LMOD2Q6P5Q4 547 aa23.47■■□□□ 1.35
LINC00535-201ENST00000501400 TSPYL6Q8N831 410 aa23.47■■□□□ 1.35
LINC00535-201ENST00000501400 ALDH1L2Q3SY69 923 aa23.46■■□□□ 1.35
LINC00535-201ENST00000501400 ZKSCAN2Q63HK3 967 aa23.46■■□□□ 1.35
LINC00535-201ENST00000501400 RGPD5Q99666 1765 aa23.45■■□□□ 1.34
LINC00535-201ENST00000501400 NCAPD2Q15021 1401 aa23.45■■□□□ 1.34
LINC00535-201ENST00000501400 VAMP4O75379 141 aa23.45■■□□□ 1.34
LINC00535-201ENST00000501400 USHBP1Q8N6Y0 703 aa23.45■■□□□ 1.34
LINC00535-201ENST00000501400 ZNF428Q96B54 188 aa23.45■■□□□ 1.34
LINC00535-201ENST00000501400 NPHP3Q7Z494 1330 aa23.44■■□□□ 1.34
LINC00535-201ENST00000501400 GAS2L2Q8NHY3 880 aa23.44■■□□□ 1.34
LINC00535-201ENST00000501400 CLUAP1Q96AJ1 413 aa23.44■■□□□ 1.34
LINC00535-201ENST00000501400 TNS3Q68CZ2 1445 aa23.44■■□□□ 1.34
LINC00535-201ENST00000501400 TRIM27P14373 513 aa23.43■■□□□ 1.34
LINC00535-201ENST00000501400 ZBTB7CA1YPR0 619 aa23.43■■□□□ 1.34
LINC00535-201ENST00000501400 PLEKHG5O94827 1062 aa23.43■■□□□ 1.34
LINC00535-201ENST00000501400 NBPF6Q5VWK0 638 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms