RNA–Protein interactions for RNA: ENST00000498787.1

PARP1-209, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 628 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-209ENST00000498787 PIK3C2AO00443 1686 aa18.96■□□□□ 0.63
PARP1-209ENST00000498787 EIF4A2Q14240 407 aaKnown RBP18.96■□□□□ 0.63
PARP1-209ENST00000498787 ARHGEF10O15013 1369 aa18.94■□□□□ 0.62
PARP1-209ENST00000498787 RIPK4P57078 832 aa18.94■□□□□ 0.62
PARP1-209ENST00000498787 NFE2L2Q16236 605 aa18.94■□□□□ 0.62
PARP1-209ENST00000498787 SOX12O15370 315 aa18.93■□□□□ 0.62
PARP1-209ENST00000498787 CT47B1P0C2W7 299 aaPredicted RBP18.93■□□□□ 0.62
PARP1-209ENST00000498787 RRP1P56182 461 aaKnown RBP18.93■□□□□ 0.62
PARP1-209ENST00000498787 RRP7AQ9Y3A4 280 aaKnown RBP18.93■□□□□ 0.62
PARP1-209ENST00000498787 HSP90AB2PQ58FF8 381 aa18.92■□□□□ 0.62
PARP1-209ENST00000498787 STRCP1A6NGW2 1772 aa18.91■□□□□ 0.62
PARP1-209ENST00000498787 HMOX1P09601 288 aa18.91■□□□□ 0.62
PARP1-209ENST00000498787 HOXC9P31274 260 aa18.91■□□□□ 0.62
PARP1-209ENST00000498787 NUTM2GQ5VZR2 741 aa18.91■□□□□ 0.62
PARP1-209ENST00000498787 PPP4R2Q9NY27 417 aa18.91■□□□□ 0.62
PARP1-209ENST00000498787 ZNF335Q9H4Z2 1342 aaPredicted RBP18.91■□□□□ 0.62
PARP1-209ENST00000498787 IP6K1Q92551 441 aa18.9■□□□□ 0.62
PARP1-209ENST00000498787 SULT6B1Q6IMI4 303 aa18.89■□□□□ 0.61
PARP1-209ENST00000498787 LMOD2Q6P5Q4 547 aa18.89■□□□□ 0.61
PARP1-209ENST00000498787 USP19O94966 1318 aa18.89■□□□□ 0.61
PARP1-209ENST00000498787 GCP02774 474 aa18.88■□□□□ 0.61
PARP1-209ENST00000498787 TRIM35Q9UPQ4 493 aa18.88■□□□□ 0.61
PARP1-209ENST00000498787 IGSF1Q8N6C5 1336 aa18.87■□□□□ 0.61
PARP1-209ENST00000498787 SLAIN2Q9P270 581 aa18.87■□□□□ 0.61
PARP1-209ENST00000498787 SLIT3O75094 1523 aa18.86■□□□□ 0.61
PARP1-209ENST00000498787 KDRP35968 1356 aa18.85■□□□□ 0.61
PARP1-209ENST00000498787 SPINK5Q9NQ38 1064 aaPredicted RBP18.85■□□□□ 0.61
PARP1-209ENST00000498787 NFAT5O94916 1531 aa18.84■□□□□ 0.61
PARP1-209ENST00000498787 PEAK1Q9H792 1746 aa18.84■□□□□ 0.61
PARP1-209ENST00000498787 GNAI1P63096 354 aa18.84■□□□□ 0.61
PARP1-209ENST00000498787 ARHGEF25Q86VW2 580 aa18.84■□□□□ 0.61
PARP1-209ENST00000498787 GAS2L2Q8NHY3 880 aa18.84■□□□□ 0.61
PARP1-209ENST00000498787 TNS3Q68CZ2 1445 aa18.83■□□□□ 0.61
PARP1-209ENST00000498787 IRX6P78412 446 aaPredicted RBP18.83■□□□□ 0.6
PARP1-209ENST00000498787 XPCQ01831 940 aaPredicted RBP18.83■□□□□ 0.6
PARP1-209ENST00000498787 BRINP3Q76B58 766 aa18.83■□□□□ 0.6
PARP1-209ENST00000498787 ZNF428Q96B54 188 aa18.83■□□□□ 0.6
PARP1-209ENST00000498787 PHACTR3Q96KR7 559 aa18.83■□□□□ 0.6
PARP1-209ENST00000498787 EYA1Q99502 592 aa18.83■□□□□ 0.6
PARP1-209ENST00000498787 TRPM3Q9HCF6 1732 aaPredicted RBP18.83■□□□□ 0.6
PARP1-209ENST00000498787 HTATSF1O43719 755 aaKnown RBP18.82■□□□□ 0.6
PARP1-209ENST00000498787 SPATA31A3Q5VYP0 1347 aa18.81■□□□□ 0.6
PARP1-209ENST00000498787 HAP1P54257 671 aaPredicted RBP18.81■□□□□ 0.6
PARP1-209ENST00000498787 IFT57Q9NWB7 429 aa18.81■□□□□ 0.6
PARP1-209ENST00000498787 MARF1Q9Y4F3 1742 aaKnown RBP18.8■□□□□ 0.6
PARP1-209ENST00000498787 PHRF1Q9P1Y6 1649 aaKnown RBP18.8■□□□□ 0.6
PARP1-209ENST00000498787 AEBP1Q8IUX7 1158 aa18.79■□□□□ 0.6
PARP1-209ENST00000498787 RTF1Q92541 710 aaKnown RBP18.79■□□□□ 0.6
PARP1-209ENST00000498787 RGPD1P0DJD0 1748 aa18.79■□□□□ 0.6
PARP1-209ENST00000498787 FANCIQ9NVI1 1328 aa18.78■□□□□ 0.6
PARP1-209ENST00000498787 MS4A1P11836 297 aa18.78■□□□□ 0.6
PARP1-209ENST00000498787 PXDNQ92626 1479 aa18.77■□□□□ 0.6
PARP1-209ENST00000498787 SOS2Q07890 1332 aaPredicted RBP18.77■□□□□ 0.6
PARP1-209ENST00000498787 CFAP44Q96MT7 982 aa18.77■□□□□ 0.6
PARP1-209ENST00000498787 ALS2Q96Q42 1657 aa18.76■□□□□ 0.59
PARP1-209ENST00000498787 ABCC6O95255 1503 aa18.76■□□□□ 0.59
PARP1-209ENST00000498787 ZBTB7CA1YPR0 619 aa18.76■□□□□ 0.59
PARP1-209ENST00000498787 LTV1Q96GA3 475 aaPredicted RBP18.76■□□□□ 0.59
PARP1-209ENST00000498787 XIRP1Q702N8 1843 aaKnown RBP18.76■□□□□ 0.59
PARP1-209ENST00000498787 CANXP27824 592 aaKnown RBP18.75■□□□□ 0.59
PARP1-209ENST00000498787 RARSP54136 660 aaKnown RBP18.75■□□□□ 0.59
PARP1-209ENST00000498787 PDE3AQ14432 1141 aa18.75■□□□□ 0.59
PARP1-209ENST00000498787 PLEKHG2Q9H7P9 1386 aa18.73■□□□□ 0.59
PARP1-209ENST00000498787 ZNF853P0CG23 659 aa18.73■□□□□ 0.59
PARP1-209ENST00000498787 EXOSC9Q06265 439 aaKnown RBP18.73■□□□□ 0.59
PARP1-209ENST00000498787 AAMPQ13685 434 aa18.73■□□□□ 0.59
PARP1-209ENST00000498787 ALDH1L2Q3SY69 923 aa18.73■□□□□ 0.59
PARP1-209ENST00000498787 AMOTQ4VCS5 1084 aa18.73■□□□□ 0.59
PARP1-209ENST00000498787 ANKRD24Q8TF21 1146 aa18.73■□□□□ 0.59
PARP1-209ENST00000498787 CCDC136Q96JN2 1154 aa18.73■□□□□ 0.59
PARP1-209ENST00000498787 MED1Q15648 1581 aaPredicted RBP18.72■□□□□ 0.59
PARP1-209ENST00000498787 CPDO75976 1380 aa18.72■□□□□ 0.59
PARP1-209ENST00000498787 MTHFSDQ2M296 383 aaKnown RBP18.72■□□□□ 0.59
PARP1-209ENST00000498787 LTN1O94822 1766 aa18.71■□□□□ 0.59
PARP1-209ENST00000498787 PLEKHO1Q53GL0 409 aaPredicted RBP18.71■□□□□ 0.59
PARP1-209ENST00000498787 TSR2Q969E8 191 aaKnown RBP18.71■□□□□ 0.59
PARP1-209ENST00000498787 BABAM1Q9NWV8 329 aa18.71■□□□□ 0.59
PARP1-209ENST00000498787 LAS1LQ9Y4W2 734 aaKnown RBP18.71■□□□□ 0.59
PARP1-209ENST00000498787 GNAT3A8MTJ3 354 aa18.7■□□□□ 0.58
PARP1-209ENST00000498787 IPO8O15397 1037 aaKnown RBP18.7■□□□□ 0.58
PARP1-209ENST00000498787 ZC3H6P61129 1189 aaKnown RBP18.7■□□□□ 0.58
PARP1-209ENST00000498787 DDX17Q92841 729 aaKnown RBP18.7■□□□□ 0.58
PARP1-209ENST00000498787 PLIN1O60240 522 aa18.69■□□□□ 0.58
PARP1-209ENST00000498787 BCAR3O75815 825 aa18.69■□□□□ 0.58
PARP1-209ENST00000498787 NBPF6Q5VWK0 638 aa18.69■□□□□ 0.58
PARP1-209ENST00000498787 NBPF4Q96M43 638 aa18.69■□□□□ 0.58
PARP1-209ENST00000498787 NCAPD2Q15021 1401 aa18.68■□□□□ 0.58
PARP1-209ENST00000498787 EXOC6Q8TAG9 804 aa18.68■□□□□ 0.58
PARP1-209ENST00000498787 ERBB3P21860 1342 aa18.68■□□□□ 0.58
PARP1-209ENST00000498787 KIF16BQ96L93 1317 aa18.68■□□□□ 0.58
PARP1-209ENST00000498787 CHL1O00533 1208 aa18.67■□□□□ 0.58
PARP1-209ENST00000498787 BRPF1P55201 1214 aaPredicted RBP18.67■□□□□ 0.58
PARP1-209ENST00000498787 MBIPQ9NS73 344 aa18.67■□□□□ 0.58
PARP1-209ENST00000498787 MAP3K5Q99683 1374 aa18.67■□□□□ 0.58
PARP1-209ENST00000498787 ZKSCAN2Q63HK3 967 aa18.66■□□□□ 0.58
PARP1-209ENST00000498787 LRRC59Q96AG4 307 aaKnown RBP18.66■□□□□ 0.58
PARP1-209ENST00000498787 CRBNQ96SW2 442 aa18.66■□□□□ 0.58
PARP1-209ENST00000498787 CHMP4AQ9BY43 222 aa18.66■□□□□ 0.58
PARP1-209ENST00000498787 SMC4Q9NTJ3 1288 aa18.66■□□□□ 0.58
PARP1-209ENST00000498787 PLEKHG5O94827 1062 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 191.8 ms