RNA–Protein interactions for RNA: ENST00000498720.1

DNAJC6-208, Transcript of DnaJ heat shock protein family (Hsp40) member C6, human

TSL 2

Gene DNAJC6, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNAJC6-208	ENST00000498720	PRDM9	Q9NQV7	894 aa		8.01	□□□□□ -1.13
DNAJC6-208	ENST00000498720	SMARCA4	P51532	1647 aa		8	□□□□□ -1.13
DNAJC6-208	ENST00000498720	PPEF1	O14829	653 aa	Predicted RBP	8	□□□□□ -1.13
DNAJC6-208	ENST00000498720	FMNL1	O95466	1100 aa	Predicted RBP	8	□□□□□ -1.13
DNAJC6-208	ENST00000498720	S1PR4	O95977	384 aa		8	□□□□□ -1.13
DNAJC6-208	ENST00000498720	NFATC2IP	Q8NCF5	419 aa		8	□□□□□ -1.13
DNAJC6-208	ENST00000498720	IRX2	Q9BZI1	471 aa	Predicted RBP	8	□□□□□ -1.13
DNAJC6-208	ENST00000498720	SALL2	Q9Y467	1007 aa	Predicted RBP	8	□□□□□ -1.13
DNAJC6-208	ENST00000498720	RNF223	E7ERA6	249 aa		7.99	□□□□□ -1.13
DNAJC6-208	ENST00000498720	SSFA2	P28290	1259 aa		7.99	□□□□□ -1.13
DNAJC6-208	ENST00000498720	EIF4G2	P78344	907 aa	Known RBP eCLIP	7.99	□□□□□ -1.13
DNAJC6-208	ENST00000498720		Q3C1V9	767 aa		7.99	□□□□□ -1.13
DNAJC6-208	ENST00000498720	NOM1	Q5C9Z4	860 aa	Known RBP	7.99	□□□□□ -1.13
DNAJC6-208	ENST00000498720	STK32A	Q8WU08	396 aa		7.99	□□□□□ -1.13
DNAJC6-208	ENST00000498720	USP35	Q9P2H5	1018 aa		7.99	□□□□□ -1.13
DNAJC6-208	ENST00000498720	ARHGEF11	O15085	1522 aa		7.98	□□□□□ -1.13
DNAJC6-208	ENST00000498720	C6orf229	H3BNL8	230 aa		7.98	□□□□□ -1.13
DNAJC6-208	ENST00000498720	ARID4A	P29374	1257 aa	Predicted RBP	7.98	□□□□□ -1.13
DNAJC6-208	ENST00000498720	NR6A1	Q15406	480 aa		7.98	□□□□□ -1.13
DNAJC6-208	ENST00000498720	PNMA1	Q8ND90	353 aa		7.98	□□□□□ -1.13
DNAJC6-208	ENST00000498720	SIRT1	Q96EB6	747 aa		7.98	□□□□□ -1.13
DNAJC6-208	ENST00000498720	SLC6A16	Q9GZN6	736 aa		7.98	□□□□□ -1.13
DNAJC6-208	ENST00000498720	PLEKHM2	Q8IWE5	1019 aa		7.97	□□□□□ -1.13
DNAJC6-208	ENST00000498720	PUS7	Q96PZ0	661 aa	Known RBP	7.97	□□□□□ -1.13
DNAJC6-208	ENST00000498720	USB1	Q9BQ65	265 aa	Known RBP	7.97	□□□□□ -1.13
DNAJC6-208	ENST00000498720	SLAIN2	Q9P270	581 aa		7.97	□□□□□ -1.13
DNAJC6-208	ENST00000498720		V9GY48	417 aa	Predicted RBP	7.97	□□□□□ -1.13
DNAJC6-208	ENST00000498720	NR1H3	Q13133	447 aa		7.96	□□□□□ -1.14
DNAJC6-208	ENST00000498720	MRRF	Q96E11	262 aa	Known RBP	7.96	□□□□□ -1.14
DNAJC6-208	ENST00000498720	FAM196B	A6NMK8	535 aa		7.95	□□□□□ -1.14
DNAJC6-208	ENST00000498720	HMGB1	P09429	215 aa	Known RBP	7.95	□□□□□ -1.14
DNAJC6-208	ENST00000498720	ZNF16	P17020	682 aa	Predicted RBP	7.95	□□□□□ -1.14
DNAJC6-208	ENST00000498720	FAM69C	Q0P6D2	419 aa		7.95	□□□□□ -1.14
DNAJC6-208	ENST00000498720	RETREG3	Q86VR2	466 aa		7.95	□□□□□ -1.14
DNAJC6-208	ENST00000498720	TSC1	Q92574	1164 aa		7.95	□□□□□ -1.14
DNAJC6-208	ENST00000498720	NOVA2	Q9UNW9	492 aa	Known RBP	7.95	□□□□□ -1.14
DNAJC6-208	ENST00000498720	SOWAHD	A6NJG2	315 aa		7.94	□□□□□ -1.14
DNAJC6-208	ENST00000498720	PIK3CD	O00329	1044 aa		7.94	□□□□□ -1.14
DNAJC6-208	ENST00000498720	PER1	O15534	1290 aa	Predicted RBP	7.94	□□□□□ -1.14
DNAJC6-208	ENST00000498720	MSS51	Q4VC12	460 aa		7.94	□□□□□ -1.14
DNAJC6-208	ENST00000498720	ANKLE1	Q8NAG6	615 aa		7.94	□□□□□ -1.14
DNAJC6-208	ENST00000498720	PEG3	Q9GZU2	1588 aa		7.93	□□□□□ -1.14
DNAJC6-208	ENST00000498720	USP17L3	A6NCW0	530 aa		7.93	□□□□□ -1.14
DNAJC6-208	ENST00000498720	USP17L4	A6NCW7	530 aa		7.93	□□□□□ -1.14
DNAJC6-208	ENST00000498720	SLC19A1	P41440	591 aa		7.93	□□□□□ -1.14
DNAJC6-208	ENST00000498720	PLA2G2C	Q5R387	149 aa		7.93	□□□□□ -1.14
DNAJC6-208	ENST00000498720	DESI1	Q6ICB0	168 aa		7.93	□□□□□ -1.14
DNAJC6-208	ENST00000498720	USP17L2	Q6R6M4	530 aa		7.93	□□□□□ -1.14
DNAJC6-208	ENST00000498720	USP17L1	Q7RTZ2	530 aa		7.93	□□□□□ -1.14
DNAJC6-208	ENST00000498720	CLP1	Q92989	425 aa	Known RBP	7.93	□□□□□ -1.14
DNAJC6-208	ENST00000498720	EMID1	Q96A84	441 aa	Predicted RBP	7.93	□□□□□ -1.14
DNAJC6-208	ENST00000498720	HSP90B1	P14625	803 aa	Known RBP	7.92	□□□□□ -1.14
DNAJC6-208	ENST00000498720	MMP16	P51512	607 aa		7.92	□□□□□ -1.14
DNAJC6-208	ENST00000498720	CEP164	Q9UPV0	1460 aa		7.92	□□□□□ -1.14
DNAJC6-208	ENST00000498720	GFRA3	O60609	400 aa		7.91	□□□□□ -1.14
DNAJC6-208	ENST00000498720	DXO	O77932	396 aa	Known RBP	7.91	□□□□□ -1.14
DNAJC6-208	ENST00000498720	FBXO45	P0C2W1	286 aa		7.91	□□□□□ -1.14
DNAJC6-208	ENST00000498720	FCF1	Q9Y324	198 aa	Known RBP	7.91	□□□□□ -1.14
DNAJC6-208	ENST00000498720	ARAP1	Q96P48	1450 aa		7.9	□□□□□ -1.14
DNAJC6-208	ENST00000498720	USP17L5	A8MUK1	530 aa		7.9	□□□□□ -1.14
DNAJC6-208	ENST00000498720	JUND	P17535	347 aa		7.9	□□□□□ -1.14
DNAJC6-208	ENST00000498720	PTK7	Q13308	1070 aa		7.9	□□□□□ -1.14
DNAJC6-208	ENST00000498720	CRTC2	Q53ET0	693 aa	Predicted RBP	7.9	□□□□□ -1.14
DNAJC6-208	ENST00000498720	LIAT1	Q6ZQX7	453 aa		7.9	□□□□□ -1.14
DNAJC6-208	ENST00000498720	FANCD2	Q9BXW9	1451 aa		7.89	□□□□□ -1.15
DNAJC6-208	ENST00000498720	ZBBX	A8MT70	800 aa		7.89	□□□□□ -1.15
DNAJC6-208	ENST00000498720	USP17L15	C9J2P7	530 aa		7.89	□□□□□ -1.15
DNAJC6-208	ENST00000498720	USP17L10	C9JJH3	530 aa		7.89	□□□□□ -1.15
DNAJC6-208	ENST00000498720	USP17L13	C9JLJ4	530 aa		7.89	□□□□□ -1.15
DNAJC6-208	ENST00000498720	USP17L12	C9JPN9	530 aa		7.89	□□□□□ -1.15
DNAJC6-208	ENST00000498720	USP17L11	C9JVI0	530 aa		7.89	□□□□□ -1.15
DNAJC6-208	ENST00000498720	USP17L21	D6R901	530 aa		7.89	□□□□□ -1.15
DNAJC6-208	ENST00000498720	USP17L18	D6R9N7	530 aa		7.89	□□□□□ -1.15
DNAJC6-208	ENST00000498720	USP17L22	D6RA61	530 aa		7.89	□□□□□ -1.15
DNAJC6-208	ENST00000498720	USP17L17	D6RBQ6	530 aa		7.89	□□□□□ -1.15
DNAJC6-208	ENST00000498720	USP17L19	D6RCP7	530 aa		7.89	□□□□□ -1.15
DNAJC6-208	ENST00000498720	USP17L20	D6RJB6	530 aa		7.89	□□□□□ -1.15
DNAJC6-208	ENST00000498720	VAMP1	P23763	118 aa		7.89	□□□□□ -1.15
DNAJC6-208	ENST00000498720	USP17L24	Q0WX57	530 aa		7.89	□□□□□ -1.15
DNAJC6-208	ENST00000498720	LYPD8	Q6UX82	237 aa		7.89	□□□□□ -1.15
DNAJC6-208	ENST00000498720	FAM174A	Q8TBP5	190 aa		7.89	□□□□□ -1.15
DNAJC6-208	ENST00000498720	CDCA7	Q9BWT1	371 aa	Predicted RBP	7.89	□□□□□ -1.15
DNAJC6-208	ENST00000498720	BCL2L13	Q9BXK5	485 aa		7.89	□□□□□ -1.15
DNAJC6-208	ENST00000498720	SKI	P12755	728 aa		7.88	□□□□□ -1.15
DNAJC6-208	ENST00000498720	LAPTM4A	Q15012	233 aa		7.88	□□□□□ -1.15
DNAJC6-208	ENST00000498720	SPRYD7	Q5W111	196 aa		7.88	□□□□□ -1.15
DNAJC6-208	ENST00000498720	NPAS4	Q8IUM7	802 aa		7.88	□□□□□ -1.15
DNAJC6-208	ENST00000498720	C1orf216	Q8TAB5	229 aa		7.88	□□□□□ -1.15
DNAJC6-208	ENST00000498720	MKRN1	Q9UHC7	482 aa	Known RBP	7.88	□□□□□ -1.15
DNAJC6-208	ENST00000498720	TCF3	P15923	654 aa		7.87	□□□□□ -1.15
DNAJC6-208	ENST00000498720	SERPINB4	P48594	390 aa		7.87	□□□□□ -1.15
DNAJC6-208	ENST00000498720	MARS	P56192	900 aa	Known RBP	7.87	□□□□□ -1.15
DNAJC6-208	ENST00000498720	MROH2B	Q7Z745	1585 aa		7.87	□□□□□ -1.15
DNAJC6-208	ENST00000498720	LZTS3	O60299	673 aa	Predicted RBP	7.86	□□□□□ -1.15
DNAJC6-208	ENST00000498720	PTCRA	Q6ISU1	281 aa	Predicted RBP	7.86	□□□□□ -1.15
DNAJC6-208	ENST00000498720		Q6ZNB5	142 aa		7.86	□□□□□ -1.15
DNAJC6-208	ENST00000498720	ZNF598	Q86UK7	904 aa	Known RBP	7.86	□□□□□ -1.15
DNAJC6-208	ENST00000498720	PHTF2	Q8N3S3	785 aa		7.86	□□□□□ -1.15
DNAJC6-208	ENST00000498720	CCDC24	Q8N4L8	307 aa		7.86	□□□□□ -1.15
DNAJC6-208	ENST00000498720	FAM200A	Q8TCP9	573 aa		7.86	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms