RNA–Protein interactions for RNA: ENST00000498434.1

RTCB-206, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 4

Gene RTCB, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-206ENST00000498434 NSD3Q9BZ95 1437 aa11.11□□□□□ -0.63
RTCB-206ENST00000498434 TXNDC2Q86VQ3 553 aa11.11□□□□□ -0.63
RTCB-206ENST00000498434 KHSRPQ92945 711 aaKnown RBP eCLIP11.11□□□□□ -0.63
RTCB-206ENST00000498434 TECPR2O15040 1411 aa11.1□□□□□ -0.63
RTCB-206ENST00000498434 SLIT1O75093 1534 aa11.1□□□□□ -0.63
RTCB-206ENST00000498434 TULP4Q9NRJ4 1543 aa11.1□□□□□ -0.63
RTCB-206ENST00000498434 KNDC1Q76NI1 1749 aa11.1□□□□□ -0.63
RTCB-206ENST00000498434 SLC12A5Q9H2X9 1139 aa11.1□□□□□ -0.63
RTCB-206ENST00000498434 DIP2AQ14689 1571 aa11.1□□□□□ -0.63
RTCB-206ENST00000498434 MINK1Q8N4C8 1332 aaPredicted RBP11.09□□□□□ -0.63
RTCB-206ENST00000498434 SMG6Q86US8 1419 aaKnown RBP11.09□□□□□ -0.63
RTCB-206ENST00000498434 PBX2P40425 430 aa11.09□□□□□ -0.63
RTCB-206ENST00000498434 CDK19Q9BWU1 502 aa11.09□□□□□ -0.63
RTCB-206ENST00000498434 TBX22Q9Y458 520 aa11.09□□□□□ -0.63
RTCB-206ENST00000498434 ARHGAP23Q9P227 1491 aa11.08□□□□□ -0.64
RTCB-206ENST00000498434 SAFB2Q14151 953 aaKnown RBP eCLIP11.08□□□□□ -0.64
RTCB-206ENST00000498434 CARD14Q9BXL6 1004 aa11.08□□□□□ -0.64
RTCB-206ENST00000498434 NUDCQ9Y266 331 aa11.08□□□□□ -0.64
RTCB-206ENST00000498434 SETD1AO15047 1707 aaKnown RBP11.08□□□□□ -0.64
RTCB-206ENST00000498434 BLMP54132 1417 aaPredicted RBP11.08□□□□□ -0.64
RTCB-206ENST00000498434 POLR3AO14802 1390 aaPredicted RBP11.07□□□□□ -0.64
RTCB-206ENST00000498434 PIK3R4Q99570 1358 aa11.07□□□□□ -0.64
RTCB-206ENST00000498434 SUPT16HQ9Y5B9 1047 aaKnown RBP11.07□□□□□ -0.64
RTCB-206ENST00000498434 CPS1P31327 1500 aa11.07□□□□□ -0.64
RTCB-206ENST00000498434 MED14O60244 1454 aa11.06□□□□□ -0.64
RTCB-206ENST00000498434 ATP7BP35670 1465 aa11.06□□□□□ -0.64
RTCB-206ENST00000498434 WASLO00401 505 aaPredicted RBP11.06□□□□□ -0.64
RTCB-206ENST00000498434 HCSTQ9UBK5 93 aa11.06□□□□□ -0.64
RTCB-206ENST00000498434 NRXN3Q9Y4C0 1643 aa11.06□□□□□ -0.64
RTCB-206ENST00000498434 METP08581 1390 aa11.05□□□□□ -0.64
RTCB-206ENST00000498434 CEBPAP49715 358 aaPredicted RBP11.05□□□□□ -0.64
RTCB-206ENST00000498434 PNNQ9H307 717 aaKnown RBP11.05□□□□□ -0.64
RTCB-206ENST00000498434 PHF8Q9UPP1 1060 aa11.05□□□□□ -0.64
RTCB-206ENST00000498434 POTEEQ6S8J3 1075 aa11.04□□□□□ -0.64
RTCB-206ENST00000498434 ANKLE2Q86XL3 938 aa11.04□□□□□ -0.64
RTCB-206ENST00000498434 A0A1W2PP64 1363 aa11.03□□□□□ -0.64
RTCB-206ENST00000498434 SETD1BQ9UPS6 1966 aaKnown RBP11.03□□□□□ -0.64
RTCB-206ENST00000498434 ADAMTS13Q76LX8 1427 aa11.03□□□□□ -0.64
RTCB-206ENST00000498434 ADAMTS8Q9UP79 889 aa11.03□□□□□ -0.64
RTCB-206ENST00000498434 CEP170BQ9Y4F5 1589 aaPredicted RBP11.03□□□□□ -0.64
RTCB-206ENST00000498434 PTCH1Q13635 1447 aa11.02□□□□□ -0.64
RTCB-206ENST00000498434 LTKP29376 864 aa11.02□□□□□ -0.65
RTCB-206ENST00000498434 WAPLQ7Z5K2 1190 aa11.02□□□□□ -0.65
RTCB-206ENST00000498434 CABP1Q9NZU7 370 aa11.02□□□□□ -0.65
RTCB-206ENST00000498434 EDC4Q6P2E9 1401 aaKnown RBP11.01□□□□□ -0.65
RTCB-206ENST00000498434 CERKQ8TCT0 537 aa11.01□□□□□ -0.65
RTCB-206ENST00000498434 ADGRB2O60241 1585 aa11.01□□□□□ -0.65
RTCB-206ENST00000498434 ADAMTSL3P82987 1691 aa11.01□□□□□ -0.65
RTCB-206ENST00000498434 RIMS1Q86UR5 1692 aaKnown RBP11.01□□□□□ -0.65
RTCB-206ENST00000498434 NUDT16Q96DE0 195 aaKnown RBP11□□□□□ -0.65
RTCB-206ENST00000498434 ZNF142P52746 1687 aaPredicted RBP11□□□□□ -0.65
RTCB-206ENST00000498434 PPIP5K1Q6PFW1 1433 aa11□□□□□ -0.65
RTCB-206ENST00000498434 AMOTL2Q9Y2J4 779 aa10.99□□□□□ -0.65
RTCB-206ENST00000498434 ANKRD26Q9UPS8 1709 aa10.98□□□□□ -0.65
RTCB-206ENST00000498434 NEFMP07197 916 aa10.98□□□□□ -0.65
RTCB-206ENST00000498434 NUDT7P0C024 238 aa10.98□□□□□ -0.65
RTCB-206ENST00000498434 MTHFSP49914 203 aa10.98□□□□□ -0.65
RTCB-206ENST00000498434 AXIN2Q9Y2T1 843 aa10.98□□□□□ -0.65
RTCB-206ENST00000498434 PLEKHH1Q9ULM0 1364 aa10.98□□□□□ -0.65
RTCB-206ENST00000498434 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.97□□□□□ -0.65
RTCB-206ENST00000498434 FYB1O15117 783 aa10.97□□□□□ -0.65
RTCB-206ENST00000498434 RUNDC1Q96C34 613 aa10.97□□□□□ -0.65
RTCB-206ENST00000498434 ZFP91Q96JP5 570 aaPredicted RBP10.97□□□□□ -0.65
RTCB-206ENST00000498434 SLC26A8Q96RN1 970 aa10.97□□□□□ -0.65
RTCB-206ENST00000498434 ROBO2Q9HCK4 1378 aa10.97□□□□□ -0.65
RTCB-206ENST00000498434 CPSF1Q10570 1443 aaKnown RBP10.97□□□□□ -0.65
RTCB-206ENST00000498434 CDC42BPGQ6DT37 1551 aa10.96□□□□□ -0.65
RTCB-206ENST00000498434 CD163L1Q9NR16 1453 aa10.96□□□□□ -0.65
RTCB-206ENST00000498434 PLEKHG3A1L390 1219 aa10.96□□□□□ -0.65
RTCB-206ENST00000498434 RIOK3O14730 519 aaKnown RBP10.96□□□□□ -0.65
RTCB-206ENST00000498434 KIF3CO14782 793 aa10.96□□□□□ -0.65
RTCB-206ENST00000498434 TNNT2P45379 298 aaPredicted RBP10.96□□□□□ -0.65
RTCB-206ENST00000498434 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.96□□□□□ -0.65
RTCB-206ENST00000498434 RNF25Q96BH1 459 aaPredicted RBP10.96□□□□□ -0.65
RTCB-206ENST00000498434 COG3Q96JB2 828 aa10.96□□□□□ -0.65
RTCB-206ENST00000498434 PPP4R2Q9NY27 417 aa10.96□□□□□ -0.65
RTCB-206ENST00000498434 LHX6Q9UPM6 363 aa10.96□□□□□ -0.65
RTCB-206ENST00000498434 KIF20BQ96Q89 1820 aa10.95□□□□□ -0.66
RTCB-206ENST00000498434 ANKARQ7Z5J8 1434 aa10.95□□□□□ -0.66
RTCB-206ENST00000498434 RNF123Q5XPI4 1314 aa10.95□□□□□ -0.66
RTCB-206ENST00000498434 E9PSI1 815 aa10.95□□□□□ -0.66
RTCB-206ENST00000498434 HSPA2P54652 639 aa10.95□□□□□ -0.66
RTCB-206ENST00000498434 GGNBP2Q9H3C7 697 aa10.95□□□□□ -0.66
RTCB-206ENST00000498434 RCAN3Q9UKA8 241 aa10.95□□□□□ -0.66
RTCB-206ENST00000498434 ADGRD1Q6QNK2 874 aa10.94□□□□□ -0.66
RTCB-206ENST00000498434 ITSN1Q15811 1721 aa10.94□□□□□ -0.66
RTCB-206ENST00000498434 AATKQ6ZMQ8 1374 aa10.93□□□□□ -0.66
RTCB-206ENST00000498434 TTC21AQ8NDW8 1320 aa10.93□□□□□ -0.66
RTCB-206ENST00000498434 DIAPH1O60610 1272 aaKnown RBP10.93□□□□□ -0.66
RTCB-206ENST00000498434 U2AF1L5P0DN76 240 aaPredicted RBP10.93□□□□□ -0.66
RTCB-206ENST00000498434 U2AF1Q01081 240 aaKnown RBP eCLIP10.93□□□□□ -0.66
RTCB-206ENST00000498434 CCDC27Q2M243 656 aa10.93□□□□□ -0.66
RTCB-206ENST00000498434 SALL2Q9Y467 1007 aaPredicted RBP10.93□□□□□ -0.66
RTCB-206ENST00000498434 MAPK8IP3Q9UPT6 1336 aa10.92□□□□□ -0.66
RTCB-206ENST00000498434 APAF1O14727 1248 aa10.92□□□□□ -0.66
RTCB-206ENST00000498434 SLC34A2O95436 690 aa10.92□□□□□ -0.66
RTCB-206ENST00000498434 NLRP6P59044 892 aa10.92□□□□□ -0.66
RTCB-206ENST00000498434 WDR63Q8IWG1 891 aa10.92□□□□□ -0.66
RTCB-206ENST00000498434 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.92□□□□□ -0.66
RTCB-206ENST00000498434 FBXO22Q8NEZ5 403 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms