RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 PAK3O75914 559 aaPredicted RBP16.09■□□□□ 0.17
AFF3-215ENST00000498090 AAMPQ13685 434 aa16.09■□□□□ 0.17
AFF3-215ENST00000498090 NHSL1Q5SYE7 1610 aa16.09■□□□□ 0.17
AFF3-215ENST00000498090 ALS2Q96Q42 1657 aa16.08■□□□□ 0.17
AFF3-215ENST00000498090 ROBO1Q9Y6N7 1651 aa16.08■□□□□ 0.17
AFF3-215ENST00000498090 COG3Q96JB2 828 aa16.08■□□□□ 0.17
AFF3-215ENST00000498090 SBNO1A3KN83 1393 aa16.08■□□□□ 0.16
AFF3-215ENST00000498090 FBLN1P23142 703 aa16.08■□□□□ 0.16
AFF3-215ENST00000498090 PDE3AQ14432 1141 aa16.07■□□□□ 0.16
AFF3-215ENST00000498090 C20orf194Q5TEA3 1177 aa16.07■□□□□ 0.16
AFF3-215ENST00000498090 NUTM2GQ5VZR2 741 aa16.07■□□□□ 0.16
AFF3-215ENST00000498090 CFAP53Q96M91 514 aa16.07■□□□□ 0.16
AFF3-215ENST00000498090 CCDC146Q8IYE0 955 aa16.06■□□□□ 0.16
AFF3-215ENST00000498090 ABTB2Q8N961 1025 aa16.06■□□□□ 0.16
AFF3-215ENST00000498090 RUNDC1Q96C34 613 aa16.06■□□□□ 0.16
AFF3-215ENST00000498090 TNS3Q68CZ2 1445 aa16.06■□□□□ 0.16
AFF3-215ENST00000498090 SOS2Q07890 1332 aaPredicted RBP16.06■□□□□ 0.16
AFF3-215ENST00000498090 NLRP6P59044 892 aa16.05■□□□□ 0.16
AFF3-215ENST00000498090 AATKQ6ZMQ8 1374 aa16.05■□□□□ 0.16
AFF3-215ENST00000498090 AHDC1Q5TGY3 1603 aaPredicted RBP16.05■□□□□ 0.16
AFF3-215ENST00000498090 CCDC27Q2M243 656 aa16.05■□□□□ 0.16
AFF3-215ENST00000498090 RTL5Q5HYW3 569 aaPredicted RBP16.04■□□□□ 0.16
AFF3-215ENST00000498090 WDR63Q8IWG1 891 aa16.04■□□□□ 0.16
AFF3-215ENST00000498090 USP35Q9P2H5 1018 aa16.04■□□□□ 0.16
AFF3-215ENST00000498090 SLIT3O75094 1523 aa16.04■□□□□ 0.16
AFF3-215ENST00000498090 SPATA31A3Q5VYP0 1347 aa16.03■□□□□ 0.16
AFF3-215ENST00000498090 MTHFSP49914 203 aa16.03■□□□□ 0.16
AFF3-215ENST00000498090 WWC1Q8IX03 1113 aa16.03■□□□□ 0.16
AFF3-215ENST00000498090 MED1Q15648 1581 aaPredicted RBP16.03■□□□□ 0.16
AFF3-215ENST00000498090 USP19O94966 1318 aa16.03■□□□□ 0.16
AFF3-215ENST00000498090 NFAT5O94916 1531 aa16.02■□□□□ 0.16
AFF3-215ENST00000498090 POLKQ9UBT6 870 aa16.02■□□□□ 0.16
AFF3-215ENST00000498090 COL3A1P02461 1466 aaPredicted RBP16.02■□□□□ 0.16
AFF3-215ENST00000498090 FAM161AQ3B820 660 aa16.02■□□□□ 0.15
AFF3-215ENST00000498090 EMILIN1Q9Y6C2 1016 aa16.02■□□□□ 0.15
AFF3-215ENST00000498090 PPM1GO15355 546 aaPredicted RBP16.01■□□□□ 0.15
AFF3-215ENST00000498090 SOX12O15370 315 aa16.01■□□□□ 0.15
AFF3-215ENST00000498090 RRS1Q15050 365 aaKnown RBP16.01■□□□□ 0.15
AFF3-215ENST00000498090 LMOD2Q6P5Q4 547 aa16.01■□□□□ 0.15
AFF3-215ENST00000498090 PEAK1Q9H792 1746 aa16■□□□□ 0.15
AFF3-215ENST00000498090 SHPRHQ149N8 1683 aa16■□□□□ 0.15
AFF3-215ENST00000498090 CRYBG1Q9Y4K1 1723 aa16■□□□□ 0.15
AFF3-215ENST00000498090 NPM2Q86SE8 214 aaKnown RBP15.99■□□□□ 0.15
AFF3-215ENST00000498090 SPINK5Q9NQ38 1064 aaPredicted RBP15.99■□□□□ 0.15
AFF3-215ENST00000498090 CDK12Q9NYV4 1490 aaPredicted RBP15.99■□□□□ 0.15
AFF3-215ENST00000498090 PHRF1Q9P1Y6 1649 aaKnown RBP15.99■□□□□ 0.15
AFF3-215ENST00000498090 ARHGEF10O15013 1369 aa15.99■□□□□ 0.15
AFF3-215ENST00000498090 PNPLA6Q8IY17 1366 aa15.99■□□□□ 0.15
AFF3-215ENST00000498090 COL16A1Q07092 1604 aaPredicted RBP15.98■□□□□ 0.15
AFF3-215ENST00000498090 MAP3K19Q56UN5 1328 aa15.98■□□□□ 0.15
AFF3-215ENST00000498090 PLEKHG5O94827 1062 aa15.97■□□□□ 0.15
AFF3-215ENST00000498090 CT47B1P0C2W7 299 aaPredicted RBP15.97■□□□□ 0.15
AFF3-215ENST00000498090 MAP2P11137 1827 aaKnown RBP15.97■□□□□ 0.15
AFF3-215ENST00000498090 DEKP35659 375 aaKnown RBP15.96■□□□□ 0.15
AFF3-215ENST00000498090 MYH16Q9H6N6 1097 aa15.96■□□□□ 0.15
AFF3-215ENST00000498090 BCAR3O75815 825 aa15.95■□□□□ 0.14
AFF3-215ENST00000498090 NBR1Q14596 966 aa15.95■□□□□ 0.14
AFF3-215ENST00000498090 MAPK8IP3Q9UPT6 1336 aa15.95■□□□□ 0.14
AFF3-215ENST00000498090 PHLPP1O60346 1717 aa15.95■□□□□ 0.14
AFF3-215ENST00000498090 GCP02774 474 aa15.95■□□□□ 0.14
AFF3-215ENST00000498090 CANXP27824 592 aaKnown RBP15.95■□□□□ 0.14
AFF3-215ENST00000498090 TCP11L2Q8N4U5 519 aa15.95■□□□□ 0.14
AFF3-215ENST00000498090 CABLES1Q8TDN4 633 aa15.95■□□□□ 0.14
AFF3-215ENST00000498090 ABCA3Q99758 1704 aa15.94■□□□□ 0.14
AFF3-215ENST00000498090 KCNH5Q8NCM2 988 aa15.94■□□□□ 0.14
AFF3-215ENST00000498090 CLUAP1Q96AJ1 413 aa15.94■□□□□ 0.14
AFF3-215ENST00000498090 BCL11AQ9H165 835 aa15.93■□□□□ 0.14
AFF3-215ENST00000498090 C8orf34Q49A92 452 aa15.92■□□□□ 0.14
AFF3-215ENST00000498090 FLT4P35916 1363 aa15.92■□□□□ 0.14
AFF3-215ENST00000498090 LTN1O94822 1766 aa15.92■□□□□ 0.14
AFF3-215ENST00000498090 RARSP54136 660 aaKnown RBP15.92■□□□□ 0.14
AFF3-215ENST00000498090 ARHGEF25Q86VW2 580 aa15.92■□□□□ 0.14
AFF3-215ENST00000498090 DAXXQ9UER7 740 aaPredicted RBP15.92■□□□□ 0.14
AFF3-215ENST00000498090 COL22A1Q8NFW1 1626 aaPredicted RBP15.91■□□□□ 0.14
AFF3-215ENST00000498090 RTL1A6NKG5 1358 aa15.91■□□□□ 0.14
AFF3-215ENST00000498090 KIF24Q5T7B8 1368 aa15.91■□□□□ 0.14
AFF3-215ENST00000498090 HSP90AB2PQ58FF8 381 aa15.91■□□□□ 0.14
AFF3-215ENST00000498090 PNNQ9H307 717 aaKnown RBP15.91■□□□□ 0.14
AFF3-215ENST00000498090 JCADQ9P266 1359 aa15.9■□□□□ 0.14
AFF3-215ENST00000498090 HOXC9P31274 260 aa15.9■□□□□ 0.14
AFF3-215ENST00000498090 LRRC59Q96AG4 307 aaKnown RBP15.9■□□□□ 0.14
AFF3-215ENST00000498090 DIAPH1O60610 1272 aaKnown RBP15.89■□□□□ 0.13
AFF3-215ENST00000498090 IL13P35225 146 aa15.89■□□□□ 0.13
AFF3-215ENST00000498090 AMPHP49418 695 aa15.89■□□□□ 0.13
AFF3-215ENST00000498090 ZC3H6P61129 1189 aaKnown RBP15.89■□□□□ 0.13
AFF3-215ENST00000498090 EIF4A2Q14240 407 aaKnown RBP15.89■□□□□ 0.13
AFF3-215ENST00000498090 ZBTB7CA1YPR0 619 aa15.88■□□□□ 0.13
AFF3-215ENST00000498090 CPDO75976 1380 aa15.87■□□□□ 0.13
AFF3-215ENST00000498090 KIAA0232Q92628 1395 aa15.87■□□□□ 0.13
AFF3-215ENST00000498090 IL16Q14005 1332 aa15.87■□□□□ 0.13
AFF3-215ENST00000498090 U2AF1L5P0DN76 240 aaPredicted RBP15.87■□□□□ 0.13
AFF3-215ENST00000498090 U2AF1Q01081 240 aaKnown RBP eCLIP15.87■□□□□ 0.13
AFF3-215ENST00000498090 IP6K1Q92551 441 aa15.87■□□□□ 0.13
AFF3-215ENST00000498090 COL18A1P39060 1754 aa15.86■□□□□ 0.13
AFF3-215ENST00000498090 RGPD1P0DJD0 1748 aa15.86■□□□□ 0.13
AFF3-215ENST00000498090 U2SURPO15042 1029 aaKnown RBP15.86■□□□□ 0.13
AFF3-215ENST00000498090 LRP6O75581 1613 aa15.85■□□□□ 0.13
AFF3-215ENST00000498090 IGHDP01880 384 aa15.85■□□□□ 0.13
AFF3-215ENST00000498090 NEFMP07197 916 aa15.85■□□□□ 0.13
AFF3-215ENST00000498090 NEUROD2Q15784 382 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms