RNA–Protein interactions for RNA: ENST00000497947.6

LMO7-213, Transcript of LIM domain 7, humanhuman

TSL 5

Gene LMO7, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-213ENST00000497947 C1orf167Q5SNV9 1468 aa11.57□□□□□ -0.56
LMO7-213ENST00000497947 PLEKHH1Q9ULM0 1364 aa11.56□□□□□ -0.56
LMO7-213ENST00000497947 PLIN1O60240 522 aa11.56□□□□□ -0.56
LMO7-213ENST00000497947 XRN1Q8IZH2 1706 aaKnown RBP11.56□□□□□ -0.56
LMO7-213ENST00000497947 ORAI2Q96SN7 254 aa11.56□□□□□ -0.56
LMO7-213ENST00000497947 NFKBIBQ15653 356 aa11.55□□□□□ -0.56
LMO7-213ENST00000497947 MYOM2P54296 1465 aa11.55□□□□□ -0.56
LMO7-213ENST00000497947 BECN1Q14457 450 aa11.54□□□□□ -0.56
LMO7-213ENST00000497947 BCL9LQ86UU0 1499 aa11.54□□□□□ -0.56
LMO7-213ENST00000497947 SBNO2Q9Y2G9 1366 aa11.54□□□□□ -0.56
LMO7-213ENST00000497947 SF3B2Q13435 895 aaKnown RBP11.53□□□□□ -0.56
LMO7-213ENST00000497947 C8orf34Q49A92 452 aa11.53□□□□□ -0.56
LMO7-213ENST00000497947 SENP3-EIF4A1A0A087X0R7 540 aa11.52□□□□□ -0.57
LMO7-213ENST00000497947 NPHP3Q7Z494 1330 aa11.52□□□□□ -0.57
LMO7-213ENST00000497947 POLR3AO14802 1390 aaPredicted RBP11.52□□□□□ -0.57
LMO7-213ENST00000497947 NRXN3Q9Y4C0 1643 aa11.51□□□□□ -0.57
LMO7-213ENST00000497947 C20orf194Q5TEA3 1177 aa11.5□□□□□ -0.57
LMO7-213ENST00000497947 DEFB132Q7Z7B7 95 aa11.5□□□□□ -0.57
LMO7-213ENST00000497947 UNC5CLQ8IV45 518 aa11.5□□□□□ -0.57
LMO7-213ENST00000497947 PMFBP1Q8TBY8 1022 aa11.5□□□□□ -0.57
LMO7-213ENST00000497947 MYOM1P52179 1685 aa11.49□□□□□ -0.57
LMO7-213ENST00000497947 NUBP1P53384 320 aa11.49□□□□□ -0.57
LMO7-213ENST00000497947 ESCO1Q5FWF5 840 aa11.49□□□□□ -0.57
LMO7-213ENST00000497947 KLHL34Q8N239 644 aa11.49□□□□□ -0.57
LMO7-213ENST00000497947 UPF2Q9HAU5 1272 aaKnown RBP11.49□□□□□ -0.57
LMO7-213ENST00000497947 VGFO15240 615 aaPredicted RBP11.48□□□□□ -0.57
LMO7-213ENST00000497947 CENPJQ9HC77 1338 aaPredicted RBP11.48□□□□□ -0.57
LMO7-213ENST00000497947 ROBO2Q9HCK4 1378 aa11.48□□□□□ -0.57
LMO7-213ENST00000497947 CLTCL1P53675 1640 aa11.48□□□□□ -0.57
LMO7-213ENST00000497947 COL22A1Q8NFW1 1626 aaPredicted RBP11.48□□□□□ -0.57
LMO7-213ENST00000497947 NALCNQ8IZF0 1738 aa11.47□□□□□ -0.57
LMO7-213ENST00000497947 FOXO3O43524 673 aa11.47□□□□□ -0.57
LMO7-213ENST00000497947 ONECUT3O60422 494 aaPredicted RBP11.46□□□□□ -0.57
LMO7-213ENST00000497947 CT47B1P0C2W7 299 aaPredicted RBP11.46□□□□□ -0.57
LMO7-213ENST00000497947 CANXP27824 592 aaKnown RBP11.46□□□□□ -0.57
LMO7-213ENST00000497947 L1TD1Q5T7N2 865 aaKnown RBP11.46□□□□□ -0.57
LMO7-213ENST00000497947 WDR63Q8IWG1 891 aa11.46□□□□□ -0.57
LMO7-213ENST00000497947 SEPT12Q8IYM1 358 aa11.46□□□□□ -0.57
LMO7-213ENST00000497947 SPOCK2Q92563 424 aa11.46□□□□□ -0.57
LMO7-213ENST00000497947 CLUAP1Q96AJ1 413 aa11.46□□□□□ -0.57
LMO7-213ENST00000497947 PUS7Q96PZ0 661 aaKnown RBP11.46□□□□□ -0.57
LMO7-213ENST00000497947 VIRMAQ69YN4 1812 aaKnown RBP11.46□□□□□ -0.58
LMO7-213ENST00000497947 C19orf67A6NJJ6 358 aa11.45□□□□□ -0.58
LMO7-213ENST00000497947 APAF1O14727 1248 aa11.45□□□□□ -0.58
LMO7-213ENST00000497947 CCDC27Q2M243 656 aa11.45□□□□□ -0.58
LMO7-213ENST00000497947 IL27Q8NEV9 243 aa11.45□□□□□ -0.58
LMO7-213ENST00000497947 LRP5O75197 1615 aa11.45□□□□□ -0.58
LMO7-213ENST00000497947 NRXN1Q9ULB1 1477 aa11.44□□□□□ -0.58
LMO7-213ENST00000497947 BAG6P46379 1132 aa11.44□□□□□ -0.58
LMO7-213ENST00000497947 FAM43AQ8N2R8 423 aa11.44□□□□□ -0.58
LMO7-213ENST00000497947 FRAT1Q92837 279 aaPredicted RBP11.44□□□□□ -0.58
LMO7-213ENST00000497947 USP32Q8NFA0 1604 aa11.44□□□□□ -0.58
LMO7-213ENST00000497947 SLIT2O94813 1529 aa11.44□□□□□ -0.58
LMO7-213ENST00000497947 PXDNQ92626 1479 aa11.44□□□□□ -0.58
LMO7-213ENST00000497947 NSD2O96028 1365 aa11.43□□□□□ -0.58
LMO7-213ENST00000497947 RPGRIP1LQ68CZ1 1315 aa11.43□□□□□ -0.58
LMO7-213ENST00000497947 PSDA5PKW4 1024 aaPredicted RBP11.43□□□□□ -0.58
LMO7-213ENST00000497947 RGS3P49796 1198 aa11.43□□□□□ -0.58
LMO7-213ENST00000497947 XPCQ01831 940 aaPredicted RBP11.43□□□□□ -0.58
LMO7-213ENST00000497947 VPS72Q15906 364 aa11.43□□□□□ -0.58
LMO7-213ENST00000497947 KRT27Q7Z3Y8 459 aa11.43□□□□□ -0.58
LMO7-213ENST00000497947 RASEFQ8IZ41 740 aa11.43□□□□□ -0.58
LMO7-213ENST00000497947 RUNDC1Q96C34 613 aa11.43□□□□□ -0.58
LMO7-213ENST00000497947 CFAP53Q96M91 514 aa11.43□□□□□ -0.58
LMO7-213ENST00000497947 NEXMIFQ5QGS0 1516 aa11.42□□□□□ -0.58
LMO7-213ENST00000497947 RWDD1Q9H446 243 aaPredicted RBP11.42□□□□□ -0.58
LMO7-213ENST00000497947 GLI3P10071 1580 aa11.41□□□□□ -0.58
LMO7-213ENST00000497947 SPATA31A3Q5VYP0 1347 aa11.41□□□□□ -0.58
LMO7-213ENST00000497947 WWC1Q8IX03 1113 aa11.41□□□□□ -0.58
LMO7-213ENST00000497947 MYH16Q9H6N6 1097 aa11.41□□□□□ -0.58
LMO7-213ENST00000497947 CCDC146Q8IYE0 955 aa11.4□□□□□ -0.58
LMO7-213ENST00000497947 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.4□□□□□ -0.58
LMO7-213ENST00000497947 BCAR3O75815 825 aa11.39□□□□□ -0.59
LMO7-213ENST00000497947 HAP1P54257 671 aaPredicted RBP11.39□□□□□ -0.59
LMO7-213ENST00000497947 RSPH6AQ9H0K4 717 aa11.39□□□□□ -0.59
LMO7-213ENST00000497947 IFT172Q9UG01 1749 aa11.39□□□□□ -0.59
LMO7-213ENST00000497947 CCDC9Q9Y3X0 531 aaKnown RBP11.39□□□□□ -0.59
LMO7-213ENST00000497947 USP19O94966 1318 aa11.38□□□□□ -0.59
LMO7-213ENST00000497947 MARF1Q9Y4F3 1742 aaKnown RBP11.38□□□□□ -0.59
LMO7-213ENST00000497947 KIF1BO60333 1816 aa11.38□□□□□ -0.59
LMO7-213ENST00000497947 FRAT2O75474 233 aaPredicted RBP11.38□□□□□ -0.59
LMO7-213ENST00000497947 KRT28Q7Z3Y7 464 aa11.38□□□□□ -0.59
LMO7-213ENST00000497947 MORC1Q86VD1 984 aa11.38□□□□□ -0.59
LMO7-213ENST00000497947 CDC42BPGQ6DT37 1551 aa11.37□□□□□ -0.59
LMO7-213ENST00000497947 NUTM2FA1L443 756 aa11.37□□□□□ -0.59
LMO7-213ENST00000497947 EIF5BO60841 1220 aaKnown RBP11.37□□□□□ -0.59
LMO7-213ENST00000497947 IGHDP01880 384 aa11.37□□□□□ -0.59
LMO7-213ENST00000497947 CD44P16070 742 aaKnown RBP11.37□□□□□ -0.59
LMO7-213ENST00000497947 SLC4A3P48751 1232 aa11.37□□□□□ -0.59
LMO7-213ENST00000497947 RARSP54136 660 aaKnown RBP11.37□□□□□ -0.59
LMO7-213ENST00000497947 EVX2Q03828 476 aa11.37□□□□□ -0.59
LMO7-213ENST00000497947 PSME1Q06323 249 aa11.37□□□□□ -0.59
LMO7-213ENST00000497947 SKAP1Q86WV1 359 aa11.37□□□□□ -0.59
LMO7-213ENST00000497947 ISY1Q9ULR0 285 aaKnown RBP11.37□□□□□ -0.59
LMO7-213ENST00000497947 NSD3Q9BZ95 1437 aa11.36□□□□□ -0.59
LMO7-213ENST00000497947 HAX1O00165 279 aa11.36□□□□□ -0.59
LMO7-213ENST00000497947 PTMSP20962 102 aa11.36□□□□□ -0.59
LMO7-213ENST00000497947 EN1Q05925 392 aaPredicted RBP11.36□□□□□ -0.59
LMO7-213ENST00000497947 R3HDM1Q15032 1099 aaKnown RBP11.36□□□□□ -0.59
LMO7-213ENST00000497947 TBC1D32Q96NH3 1257 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms