RNA–Protein interactions for RNA: ENST00000497403.5

GRHL1-208, Transcript of grainyhead like transcription factor 1, human

TSL 2

Gene GRHL1, Length 5,400 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRHL1-208	ENST00000497403	CCDC57	Q2TAC2	916 aa		13.8	□□□□□ -0.2
GRHL1-208	ENST00000497403	CCAR1	Q8IX12	1150 aa	Known RBP	13.8	□□□□□ -0.2
GRHL1-208	ENST00000497403	NECTIN2	Q92692	538 aa		13.8	□□□□□ -0.2
GRHL1-208	ENST00000497403	BRMS1	Q9HCU9	246 aa		13.8	□□□□□ -0.2
GRHL1-208	ENST00000497403	SLF2	Q8IX21	1173 aa		13.8	□□□□□ -0.2
GRHL1-208	ENST00000497403	ABCA8	O94911	1581 aa		13.8	□□□□□ -0.2
GRHL1-208	ENST00000497403	XPC	Q01831	940 aa	Predicted RBP	13.79	□□□□□ -0.2
GRHL1-208	ENST00000497403	INTS3	Q68E01	1043 aa	Known RBP	13.79	□□□□□ -0.2
GRHL1-208	ENST00000497403	RALYL	Q86SE5	291 aa	Known RBP	13.79	□□□□□ -0.2
GRHL1-208	ENST00000497403	TTC39A	Q5SRH9	613 aa		13.79	□□□□□ -0.2
GRHL1-208	ENST00000497403	NEUROD6	Q96NK8	337 aa		13.79	□□□□□ -0.2
GRHL1-208	ENST00000497403	FMNL2	Q96PY5	1086 aa		13.79	□□□□□ -0.2
GRHL1-208	ENST00000497403		H3BQV1	296 aa		13.79	□□□□□ -0.2
GRHL1-208	ENST00000497403	TPM2	P07951	284 aa		13.79	□□□□□ -0.2
GRHL1-208	ENST00000497403	IFFO2	Q5TF58	517 aa		13.79	□□□□□ -0.2
GRHL1-208	ENST00000497403	CCDC27	Q2M243	656 aa		13.79	□□□□□ -0.2
GRHL1-208	ENST00000497403	PHF14	O94880	888 aa		13.78	□□□□□ -0.2
GRHL1-208	ENST00000497403	NACAP1	Q9BZK3	213 aa		13.78	□□□□□ -0.2
GRHL1-208	ENST00000497403	NCKAP5L	Q9HCH0	1330 aa		13.78	□□□□□ -0.2
GRHL1-208	ENST00000497403	PSMA5	P28066	241 aa		13.78	□□□□□ -0.2
GRHL1-208	ENST00000497403	DHX16	O60231	1041 aa	Known RBP	13.78	□□□□□ -0.2
GRHL1-208	ENST00000497403	TAF7	Q15545	349 aa	Predicted RBP	13.78	□□□□□ -0.2
GRHL1-208	ENST00000497403	LARP1	Q6PKG0	1096 aa	Known RBP	13.78	□□□□□ -0.2
GRHL1-208	ENST00000497403	CPLX1	O14810	134 aa		13.77	□□□□□ -0.2
GRHL1-208	ENST00000497403	IFT57	Q9NWB7	429 aa		13.77	□□□□□ -0.2
GRHL1-208	ENST00000497403	HOOK1	Q9UJC3	728 aa	Known RBP	13.77	□□□□□ -0.2
GRHL1-208	ENST00000497403	ACE	P12821	1306 aa		13.77	□□□□□ -0.2
GRHL1-208	ENST00000497403	SIRT1	Q96EB6	747 aa		13.77	□□□□□ -0.21
GRHL1-208	ENST00000497403	SAFB	Q15424	915 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
GRHL1-208	ENST00000497403	SF3A1	Q15459	793 aa	Known RBP	13.77	□□□□□ -0.21
GRHL1-208	ENST00000497403	AKAP2	Q9Y2D5	859 aa		13.77	□□□□□ -0.21
GRHL1-208	ENST00000497403	POLD1	P28340	1107 aa		13.77	□□□□□ -0.21
GRHL1-208	ENST00000497403	ARHGEF12	Q9NZN5	1544 aa		13.76	□□□□□ -0.21
GRHL1-208	ENST00000497403	GCC1	Q96CN9	775 aa		13.76	□□□□□ -0.21
GRHL1-208	ENST00000497403	CCDC43	Q96MW1	224 aa	Known RBP	13.76	□□□□□ -0.21
GRHL1-208	ENST00000497403	ZNF287	Q9HBT7	754 aa		13.76	□□□□□ -0.21
GRHL1-208	ENST00000497403	NFXL1	Q6ZNB6	911 aa		13.76	□□□□□ -0.21
GRHL1-208	ENST00000497403	HYPK	Q9NX55	129 aa		13.76	□□□□□ -0.21
GRHL1-208	ENST00000497403	WASHC4	Q2M389	1173 aa		13.76	□□□□□ -0.21
GRHL1-208	ENST00000497403	PPIP5K1	Q6PFW1	1433 aa		13.76	□□□□□ -0.21
GRHL1-208	ENST00000497403	ST5	P78524	1137 aa		13.76	□□□□□ -0.21
GRHL1-208	ENST00000497403	NLRP1	Q9C000	1473 aa		13.75	□□□□□ -0.21
GRHL1-208	ENST00000497403	KDM5D	Q9BY66	1539 aa		13.75	□□□□□ -0.21
GRHL1-208	ENST00000497403	ANKRD24	Q8TF21	1146 aa		13.75	□□□□□ -0.21
GRHL1-208	ENST00000497403	RALGAPB	Q86X10	1494 aa		13.75	□□□□□ -0.21
GRHL1-208	ENST00000497403	RRS1	Q15050	365 aa	Known RBP	13.74	□□□□□ -0.21
GRHL1-208	ENST00000497403	RPGR	Q92834	1020 aa	Known RBP	13.74	□□□□□ -0.21
GRHL1-208	ENST00000497403	PDE3A	Q14432	1141 aa		13.74	□□□□□ -0.21
GRHL1-208	ENST00000497403	PPP1R42	Q7Z4L9	355 aa		13.74	□□□□□ -0.21
GRHL1-208	ENST00000497403	ADAMTS8	Q9UP79	889 aa		13.74	□□□□□ -0.21
GRHL1-208	ENST00000497403	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.74	□□□□□ -0.21
GRHL1-208	ENST00000497403	MLH3	Q9UHC1	1453 aa		13.74	□□□□□ -0.21
GRHL1-208	ENST00000497403	ARAP3	Q8WWN8	1544 aa		13.74	□□□□□ -0.21
GRHL1-208	ENST00000497403	ANO2	Q9NQ90	1003 aa		13.73	□□□□□ -0.21
GRHL1-208	ENST00000497403	PIK3C2G	O75747	1445 aa		13.73	□□□□□ -0.21
GRHL1-208	ENST00000497403	ZFYVE9	O95405	1425 aa		13.73	□□□□□ -0.21
GRHL1-208	ENST00000497403	RAD21	O60216	631 aa		13.73	□□□□□ -0.21
GRHL1-208	ENST00000497403	ADGB	Q8N7X0	1667 aa		13.73	□□□□□ -0.21
GRHL1-208	ENST00000497403	MAGI3	Q5TCQ9	1506 aa		13.73	□□□□□ -0.21
GRHL1-208	ENST00000497403	SLC4A2	P04920	1241 aa		13.72	□□□□□ -0.21
GRHL1-208	ENST00000497403	ZCRB1	Q8TBF4	217 aa	Known RBP	13.72	□□□□□ -0.21
GRHL1-208	ENST00000497403	BCL2L13	Q9BXK5	485 aa		13.72	□□□□□ -0.21
GRHL1-208	ENST00000497403	DDB1	Q16531	1140 aa		13.72	□□□□□ -0.21
GRHL1-208	ENST00000497403	ABCC1	P33527	1531 aa		13.72	□□□□□ -0.21
GRHL1-208	ENST00000497403	COG6	Q9Y2V7	657 aa		13.72	□□□□□ -0.21
GRHL1-208	ENST00000497403	CEP126	Q9P2H0	1117 aa		13.71	□□□□□ -0.21
GRHL1-208	ENST00000497403	CAVIN4	Q5BKX8	364 aa		13.71	□□□□□ -0.21
GRHL1-208	ENST00000497403	TMEM2	Q9UHN6	1383 aa		13.71	□□□□□ -0.22
GRHL1-208	ENST00000497403	NME9	Q86XW9	330 aa		13.71	□□□□□ -0.22
GRHL1-208	ENST00000497403	NKTR	P30414	1462 aa	Known RBP	13.7	□□□□□ -0.22
GRHL1-208	ENST00000497403	SOS1	Q07889	1333 aa	Predicted RBP	13.7	□□□□□ -0.22
GRHL1-208	ENST00000497403	HECW2	Q9P2P5	1572 aa		13.7	□□□□□ -0.22
GRHL1-208	ENST00000497403	ALDH1L2	Q3SY69	923 aa		13.7	□□□□□ -0.22
GRHL1-208	ENST00000497403	FSD1	Q9BTV5	496 aa		13.7	□□□□□ -0.22
GRHL1-208	ENST00000497403	SURF6	O75683	361 aa	Known RBP	13.7	□□□□□ -0.22
GRHL1-208	ENST00000497403	IFIT1	P09914	478 aa	Known RBP	13.7	□□□□□ -0.22
GRHL1-208	ENST00000497403	IL2RB	P14784	551 aa		13.7	□□□□□ -0.22
GRHL1-208	ENST00000497403	RFC4	P35249	363 aa		13.7	□□□□□ -0.22
GRHL1-208	ENST00000497403	WWC2	Q6AWC2	1192 aa		13.7	□□□□□ -0.22
GRHL1-208	ENST00000497403	C8orf37	Q96NL8	207 aa		13.7	□□□□□ -0.22
GRHL1-208	ENST00000497403	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.7	□□□□□ -0.22
GRHL1-208	ENST00000497403	PLIN1	O60240	522 aa		13.7	□□□□□ -0.22
GRHL1-208	ENST00000497403	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.7	□□□□□ -0.22
GRHL1-208	ENST00000497403	EXOSC9	Q06265	439 aa	Known RBP	13.69	□□□□□ -0.22
GRHL1-208	ENST00000497403	CDC5L	Q99459	802 aa	Known RBP	13.69	□□□□□ -0.22
GRHL1-208	ENST00000497403	NYX	Q9GZU5	481 aa		13.69	□□□□□ -0.22
GRHL1-208	ENST00000497403	NOP58	Q9Y2X3	529 aa	Known RBP	13.69	□□□□□ -0.22
GRHL1-208	ENST00000497403	KDM6B	O15054	1643 aa		13.69	□□□□□ -0.22
GRHL1-208	ENST00000497403	FAM177B	A6PVY3	158 aa		13.69	□□□□□ -0.22
GRHL1-208	ENST00000497403	FAM161A	Q3B820	660 aa		13.69	□□□□□ -0.22
GRHL1-208	ENST00000497403	CEP89	Q96ST8	783 aa		13.69	□□□□□ -0.22
GRHL1-208	ENST00000497403	CDC45	O75419	566 aa		13.69	□□□□□ -0.22
GRHL1-208	ENST00000497403	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
GRHL1-208	ENST00000497403	DBF4	Q9UBU7	674 aa	Predicted RBP	13.68	□□□□□ -0.22
GRHL1-208	ENST00000497403	FLT4	P35916	1363 aa		13.68	□□□□□ -0.22
GRHL1-208	ENST00000497403	PLCB2	Q00722	1185 aa		13.68	□□□□□ -0.22
GRHL1-208	ENST00000497403	DRC7	Q8IY82	874 aa		13.68	□□□□□ -0.22
GRHL1-208	ENST00000497403	CTNNA3	Q9UI47	895 aa		13.68	□□□□□ -0.22
GRHL1-208	ENST00000497403	PCDH11X	Q9BZA7	1347 aa		13.68	□□□□□ -0.22
GRHL1-208	ENST00000497403	PCDH11Y	Q9BZA8	1340 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms