RNA–Protein interactions for RNA: ENST00000496108.5

LYSMD4-209, Transcript of LysM domain containing 4, humanhuman

TSL 2

Gene LYSMD4, Length 2,222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-209ENST00000496108 CDC42BPGQ6DT37 1551 aa25.44■■□□□ 1.66
LYSMD4-209ENST00000496108 CDC45O75419 566 aa25.44■■□□□ 1.66
LYSMD4-209ENST00000496108 PNPLA6Q8IY17 1366 aa25.44■■□□□ 1.66
LYSMD4-209ENST00000496108 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.44■■□□□ 1.66
LYSMD4-209ENST00000496108 FOXD4L1Q9NU39 408 aa25.43■■□□□ 1.66
LYSMD4-209ENST00000496108 CABP2Q9NPB3 220 aa25.42■■□□□ 1.66
LYSMD4-209ENST00000496108 MSNP26038 577 aaKnown RBP25.41■■□□□ 1.66
LYSMD4-209ENST00000496108 NUCB2P80303 420 aa25.41■■□□□ 1.66
LYSMD4-209ENST00000496108 RABEP1Q15276 862 aa25.41■■□□□ 1.66
LYSMD4-209ENST00000496108 RBM42Q9BTD8 480 aaKnown RBP25.41■■□□□ 1.66
LYSMD4-209ENST00000496108 DIAPH1O60610 1272 aaKnown RBP25.41■■□□□ 1.66
LYSMD4-209ENST00000496108 GGNBP2Q9H3C7 697 aa25.4■■□□□ 1.66
LYSMD4-209ENST00000496108 ZFYVE9O95405 1425 aa25.39■■□□□ 1.66
LYSMD4-209ENST00000496108 CYP2E1P05181 493 aaPredicted RBP25.39■■□□□ 1.65
LYSMD4-209ENST00000496108 FCHSD2O94868 740 aa25.38■■□□□ 1.65
LYSMD4-209ENST00000496108 MRPL50Q8N5N7 158 aaKnown RBP25.38■■□□□ 1.65
LYSMD4-209ENST00000496108 CAMSAP1Q5T5Y3 1602 aa25.38■■□□□ 1.65
LYSMD4-209ENST00000496108 ATAD2Q6PL18 1390 aa25.37■■□□□ 1.65
LYSMD4-209ENST00000496108 ABCC4O15439 1325 aa25.37■■□□□ 1.65
LYSMD4-209ENST00000496108 LRRC7Q96NW7 1537 aa25.37■■□□□ 1.65
LYSMD4-209ENST00000496108 PIK3C2BO00750 1634 aa25.37■■□□□ 1.65
LYSMD4-209ENST00000496108 HECW2Q9P2P5 1572 aa25.37■■□□□ 1.65
LYSMD4-209ENST00000496108 FAM135BQ49AJ0 1406 aa25.36■■□□□ 1.65
LYSMD4-209ENST00000496108 FYB1O15117 783 aa25.36■■□□□ 1.65
LYSMD4-209ENST00000496108 VGFO15240 615 aaPredicted RBP25.36■■□□□ 1.65
LYSMD4-209ENST00000496108 NEXMIFQ5QGS0 1516 aa25.36■■□□□ 1.65
LYSMD4-209ENST00000496108 SIRT2Q8IXJ6 389 aa25.36■■□□□ 1.65
LYSMD4-209ENST00000496108 PDLIM2Q96JY6 352 aa25.35■■□□□ 1.65
LYSMD4-209ENST00000496108 TERF2IPQ9NYB0 399 aa25.35■■□□□ 1.65
LYSMD4-209ENST00000496108 RICTORQ6R327 1708 aa25.35■■□□□ 1.65
LYSMD4-209ENST00000496108 FRMPD1Q5SYB0 1578 aa25.35■■□□□ 1.65
LYSMD4-209ENST00000496108 VAMP4O75379 141 aa25.35■■□□□ 1.65
LYSMD4-209ENST00000496108 CALD1Q05682 793 aaKnown RBP25.35■■□□□ 1.65
LYSMD4-209ENST00000496108 RAPGEF3O95398 923 aa25.33■■□□□ 1.65
LYSMD4-209ENST00000496108 ZSCAN23Q3MJ62 389 aa25.33■■□□□ 1.65
LYSMD4-209ENST00000496108 CWC22Q9HCG8 908 aaKnown RBP25.33■■□□□ 1.65
LYSMD4-209ENST00000496108 LMBRD1Q9NUN5 540 aa25.33■■□□□ 1.65
LYSMD4-209ENST00000496108 NOL7Q9UMY1 257 aaKnown RBP25.33■■□□□ 1.65
LYSMD4-209ENST00000496108 CD163L1Q9NR16 1453 aa25.33■■□□□ 1.65
LYSMD4-209ENST00000496108 ZNF500O60304 480 aaPredicted RBP25.33■■□□□ 1.65
LYSMD4-209ENST00000496108 KIF24Q5T7B8 1368 aa25.32■■□□□ 1.64
LYSMD4-209ENST00000496108 C1orf115Q9H7X2 142 aa25.32■■□□□ 1.64
LYSMD4-209ENST00000496108 GSPT1P15170 499 aaKnown RBP25.32■■□□□ 1.64
LYSMD4-209ENST00000496108 MCTP1Q6DN14 999 aa25.32■■□□□ 1.64
LYSMD4-209ENST00000496108 CLTCQ00610 1675 aaKnown RBP25.31■■□□□ 1.64
LYSMD4-209ENST00000496108 MAP7D2Q96T17 732 aa25.31■■□□□ 1.64
LYSMD4-209ENST00000496108 YEATS2Q9ULM3 1422 aa25.3■■□□□ 1.64
LYSMD4-209ENST00000496108 ABCC3O15438 1527 aa25.3■■□□□ 1.64
LYSMD4-209ENST00000496108 SRPK2P78362 688 aaKnown RBP25.3■■□□□ 1.64
LYSMD4-209ENST00000496108 CAVIN1Q6NZI2 390 aaKnown RBP25.3■■□□□ 1.64
LYSMD4-209ENST00000496108 PLEKHM2Q8IWE5 1019 aa25.29■■□□□ 1.64
LYSMD4-209ENST00000496108 IFT57Q9NWB7 429 aa25.28■■□□□ 1.64
LYSMD4-209ENST00000496108 USP26Q9BXU7 913 aa25.28■■□□□ 1.64
LYSMD4-209ENST00000496108 MCM5P33992 734 aa25.27■■□□□ 1.64
LYSMD4-209ENST00000496108 GNAI1P63096 354 aa25.27■■□□□ 1.64
LYSMD4-209ENST00000496108 NFE2L2Q16236 605 aa25.27■■□□□ 1.64
LYSMD4-209ENST00000496108 TTC22Q5TAA0 569 aa25.27■■□□□ 1.64
LYSMD4-209ENST00000496108 PRKAR2BP31323 418 aa25.27■■□□□ 1.64
LYSMD4-209ENST00000496108 API5Q9BZZ5 524 aaKnown RBP25.27■■□□□ 1.64
LYSMD4-209ENST00000496108 RBSNQ9H1K0 784 aa25.27■■□□□ 1.64
LYSMD4-209ENST00000496108 POGZQ7Z3K3 1410 aa25.26■■□□□ 1.63
LYSMD4-209ENST00000496108 INTS3Q68E01 1043 aaKnown RBP25.25■■□□□ 1.63
LYSMD4-209ENST00000496108 DCTPP1Q9H773 170 aa25.25■■□□□ 1.63
LYSMD4-209ENST00000496108 PTPRMP28827 1452 aa25.25■■□□□ 1.63
LYSMD4-209ENST00000496108 ZNF853P0CG23 659 aa25.24■■□□□ 1.63
LYSMD4-209ENST00000496108 KIF20BQ96Q89 1820 aa25.24■■□□□ 1.63
LYSMD4-209ENST00000496108 MLH3Q9UHC1 1453 aa25.23■■□□□ 1.63
LYSMD4-209ENST00000496108 NCLP19338 710 aaKnown RBP25.23■■□□□ 1.63
LYSMD4-209ENST00000496108 HDGFL2Q7Z4V5 671 aaPredicted RBP25.23■■□□□ 1.63
LYSMD4-209ENST00000496108 TSPYL6Q8N831 410 aa25.23■■□□□ 1.63
LYSMD4-209ENST00000496108 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.23■■□□□ 1.63
LYSMD4-209ENST00000496108 ST18O60284 1047 aa25.22■■□□□ 1.63
LYSMD4-209ENST00000496108 CSPP1Q1MSJ5 1256 aa25.22■■□□□ 1.63
LYSMD4-209ENST00000496108 ZKSCAN5Q9Y2L8 839 aa25.22■■□□□ 1.63
LYSMD4-209ENST00000496108 PRIM1P49642 420 aaKnown RBP25.22■■□□□ 1.63
LYSMD4-209ENST00000496108 SAFB2Q14151 953 aaKnown RBP eCLIP25.22■■□□□ 1.63
LYSMD4-209ENST00000496108 KNDC1Q76NI1 1749 aa25.21■■□□□ 1.63
LYSMD4-209ENST00000496108 SIGLEC1Q9BZZ2 1709 aa25.21■■□□□ 1.63
LYSMD4-209ENST00000496108 CFAP65Q6ZU64 1925 aaKnown RBP25.21■■□□□ 1.63
LYSMD4-209ENST00000496108 R3HCC1Q9Y3T6 440 aaKnown RBP25.2■■□□□ 1.62
LYSMD4-209ENST00000496108 GGT6Q6P531 493 aa25.2■■□□□ 1.62
LYSMD4-209ENST00000496108 LRSAM1Q6UWE0 723 aa25.2■■□□□ 1.62
LYSMD4-209ENST00000496108 GPT2Q8TD30 523 aa25.2■■□□□ 1.62
LYSMD4-209ENST00000496108 PKP1Q13835 747 aa25.19■■□□□ 1.62
LYSMD4-209ENST00000496108 CASC1Q6TDU7 716 aa25.19■■□□□ 1.62
LYSMD4-209ENST00000496108 MBIPQ9NS73 344 aa25.19■■□□□ 1.62
LYSMD4-209ENST00000496108 TWISTNBQ3B726 338 aaPredicted RBP25.18■■□□□ 1.62
LYSMD4-209ENST00000496108 MTERF4Q7Z6M4 381 aaKnown RBP25.18■■□□□ 1.62
LYSMD4-209ENST00000496108 PRPF40AO75400 957 aaKnown RBP25.17■■□□□ 1.62
LYSMD4-209ENST00000496108 NUTM2DQ5VT03 806 aaPredicted RBP25.17■■□□□ 1.62
LYSMD4-209ENST00000496108 ARHGEF40Q8TER5 1519 aa25.17■■□□□ 1.62
LYSMD4-209ENST00000496108 AK9Q5TCS8 1911 aa25.17■■□□□ 1.62
LYSMD4-209ENST00000496108 CCDC39Q9UFE4 941 aa25.17■■□□□ 1.62
LYSMD4-209ENST00000496108 PHACTR3Q96KR7 559 aa25.16■■□□□ 1.62
LYSMD4-209ENST00000496108 ZDHHC9Q9Y397 364 aa25.16■■□□□ 1.62
LYSMD4-209ENST00000496108 LMOD3Q0VAK6 560 aa25.16■■□□□ 1.62
LYSMD4-209ENST00000496108 ANKRD44Q8N8A2 993 aa25.16■■□□□ 1.62
LYSMD4-209ENST00000496108 POLKQ9UBT6 870 aa25.16■■□□□ 1.62
LYSMD4-209ENST00000496108 THUMPD2Q9BTF0 503 aaKnown RBP25.15■■□□□ 1.62
LYSMD4-209ENST00000496108 YTHDC2Q9H6S0 1430 aaKnown RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms