RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 WDR63Q8IWG1 891 aa21.48■■□□□ 1.03
HLA-A-208ENST00000496081 XPCQ01831 940 aaPredicted RBP21.47■■□□□ 1.03
HLA-A-208ENST00000496081 FLT4P35916 1363 aa21.47■■□□□ 1.03
HLA-A-208ENST00000496081 TRPM3Q9HCF6 1732 aaPredicted RBP21.46■■□□□ 1.03
HLA-A-208ENST00000496081 ERICH6BQ5W0A0 696 aa21.46■■□□□ 1.03
HLA-A-208ENST00000496081 KRT28Q7Z3Y7 464 aa21.45■■□□□ 1.02
HLA-A-208ENST00000496081 AMPHP49418 695 aa21.44■■□□□ 1.02
HLA-A-208ENST00000496081 TRIM35Q9UPQ4 493 aa21.44■■□□□ 1.02
HLA-A-208ENST00000496081 RGPD1P0DJD0 1748 aa21.44■■□□□ 1.02
HLA-A-208ENST00000496081 PHACTR3Q96KR7 559 aa21.43■■□□□ 1.02
HLA-A-208ENST00000496081 KIF24Q5T7B8 1368 aa21.43■■□□□ 1.02
HLA-A-208ENST00000496081 NEFMP07197 916 aa21.43■■□□□ 1.02
HLA-A-208ENST00000496081 RRP1P56182 461 aaKnown RBP21.43■■□□□ 1.02
HLA-A-208ENST00000496081 RIPK4P57078 832 aa21.43■■□□□ 1.02
HLA-A-208ENST00000496081 NFAT5O94916 1531 aa21.42■■□□□ 1.02
HLA-A-208ENST00000496081 HOXC9P31274 260 aa21.41■■□□□ 1.02
HLA-A-208ENST00000496081 KCNH5Q8NCM2 988 aa21.4■■□□□ 1.02
HLA-A-208ENST00000496081 LTN1O94822 1766 aa21.39■■□□□ 1.02
HLA-A-208ENST00000496081 SULT6B1Q6IMI4 303 aa21.39■■□□□ 1.01
HLA-A-208ENST00000496081 AEBP1Q8IUX7 1158 aa21.39■■□□□ 1.01
HLA-A-208ENST00000496081 NFE2L2Q16236 605 aa21.38■■□□□ 1.01
HLA-A-208ENST00000496081 SLIT3O75094 1523 aa21.38■■□□□ 1.01
HLA-A-208ENST00000496081 CERKQ8TCT0 537 aa21.38■■□□□ 1.01
HLA-A-208ENST00000496081 DDX17Q92841 729 aaKnown RBP21.38■■□□□ 1.01
HLA-A-208ENST00000496081 RTL1A6NKG5 1358 aa21.37■■□□□ 1.01
HLA-A-208ENST00000496081 ARHGEF10O15013 1369 aa21.37■■□□□ 1.01
HLA-A-208ENST00000496081 ALS2Q96Q42 1657 aa21.37■■□□□ 1.01
HLA-A-208ENST00000496081 LMOD2Q6P5Q4 547 aa21.37■■□□□ 1.01
HLA-A-208ENST00000496081 USP19O94966 1318 aa21.36■■□□□ 1.01
HLA-A-208ENST00000496081 NPHP3Q7Z494 1330 aa21.36■■□□□ 1.01
HLA-A-208ENST00000496081 MYH16Q9H6N6 1097 aa21.36■■□□□ 1.01
HLA-A-208ENST00000496081 GCP02774 474 aa21.35■■□□□ 1.01
HLA-A-208ENST00000496081 EYA1Q99502 592 aa21.35■■□□□ 1.01
HLA-A-208ENST00000496081 IL16Q14005 1332 aa21.34■■□□□ 1.01
HLA-A-208ENST00000496081 DLG5Q8TDM6 1919 aa21.34■■□□□ 1.01
HLA-A-208ENST00000496081 PHRF1Q9P1Y6 1649 aaKnown RBP21.34■■□□□ 1.01
HLA-A-208ENST00000496081 IGSF1Q8N6C5 1336 aa21.34■■□□□ 1.01
HLA-A-208ENST00000496081 IP6K1Q92551 441 aa21.33■■□□□ 1.01
HLA-A-208ENST00000496081 PPP4R2Q9NY27 417 aa21.33■■□□□ 1.01
HLA-A-208ENST00000496081 KDRP35968 1356 aa21.33■■□□□ 1
HLA-A-208ENST00000496081 BRINP3Q76B58 766 aa21.33■■□□□ 1
HLA-A-208ENST00000496081 PLIN1O60240 522 aa21.32■■□□□ 1
HLA-A-208ENST00000496081 SLAIN2Q9P270 581 aa21.32■■□□□ 1
HLA-A-208ENST00000496081 PXDNQ92626 1479 aa21.32■■□□□ 1
HLA-A-208ENST00000496081 PLEKHG5O94827 1062 aa21.31■■□□□ 1
HLA-A-208ENST00000496081 ARHGEF25Q86VW2 580 aa21.31■■□□□ 1
HLA-A-208ENST00000496081 MED1Q15648 1581 aaPredicted RBP21.3■■□□□ 1
HLA-A-208ENST00000496081 FANCIQ9NVI1 1328 aa21.3■■□□□ 1
HLA-A-208ENST00000496081 TSR2Q969E8 191 aaKnown RBP21.29■■□□□ 1
HLA-A-208ENST00000496081 LTV1Q96GA3 475 aaPredicted RBP21.29■■□□□ 1
HLA-A-208ENST00000496081 ZBTB7CA1YPR0 619 aa21.28■■□□□ 1
HLA-A-208ENST00000496081 TNS3Q68CZ2 1445 aa21.28■■□□□ 1
HLA-A-208ENST00000496081 LMOD3Q0VAK6 560 aa21.28■■□□□ 1
HLA-A-208ENST00000496081 BCAR3O75815 825 aa21.27■■□□□ 1
HLA-A-208ENST00000496081 THUMPD2Q9BTF0 503 aaKnown RBP21.27■■□□□ 1
HLA-A-208ENST00000496081 SPATA31A3Q5VYP0 1347 aa21.27■■□□□ 1
HLA-A-208ENST00000496081 CALD1Q05682 793 aaKnown RBP21.25■□□□□ 0.99
HLA-A-208ENST00000496081 UBAP1LF5GYI3 381 aa21.25■□□□□ 0.99
HLA-A-208ENST00000496081 FAM83GA6ND36 823 aa21.24■□□□□ 0.99
HLA-A-208ENST00000496081 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.24■□□□□ 0.99
HLA-A-208ENST00000496081 EXOC6Q8TAG9 804 aa21.24■□□□□ 0.99
HLA-A-208ENST00000496081 RARSP54136 660 aaKnown RBP21.23■□□□□ 0.99
HLA-A-208ENST00000496081 EXOSC9Q06265 439 aaKnown RBP21.23■□□□□ 0.99
HLA-A-208ENST00000496081 MTHFSDQ2M296 383 aaKnown RBP21.23■□□□□ 0.99
HLA-A-208ENST00000496081 C20orf194Q5TEA3 1177 aa21.23■□□□□ 0.99
HLA-A-208ENST00000496081 SOS2Q07890 1332 aaPredicted RBP21.22■□□□□ 0.99
HLA-A-208ENST00000496081 CT47B1P0C2W7 299 aaPredicted RBP21.22■□□□□ 0.99
HLA-A-208ENST00000496081 DCTN1Q14203 1278 aa21.22■□□□□ 0.99
HLA-A-208ENST00000496081 NBPF6Q5VWK0 638 aa21.22■□□□□ 0.99
HLA-A-208ENST00000496081 B4GALNT3Q6L9W6 998 aa21.22■□□□□ 0.99
HLA-A-208ENST00000496081 NBPF4Q96M43 638 aa21.22■□□□□ 0.99
HLA-A-208ENST00000496081 IFT57Q9NWB7 429 aa21.22■□□□□ 0.99
HLA-A-208ENST00000496081 CRYBG1Q9Y4K1 1723 aa21.22■□□□□ 0.99
HLA-A-208ENST00000496081 TOM1O60784 492 aa21.21■□□□□ 0.99
HLA-A-208ENST00000496081 ZNF853P0CG23 659 aa21.21■□□□□ 0.99
HLA-A-208ENST00000496081 ZC3H6P61129 1189 aaKnown RBP21.21■□□□□ 0.99
HLA-A-208ENST00000496081 PIP4K2BP78356 416 aa21.21■□□□□ 0.99
HLA-A-208ENST00000496081 RGPD2P0DJD1 1756 aa21.21■□□□□ 0.99
HLA-A-208ENST00000496081 GNAI1P63096 354 aa21.2■□□□□ 0.99
HLA-A-208ENST00000496081 USHBP1Q8N6Y0 703 aa21.2■□□□□ 0.99
HLA-A-208ENST00000496081 CABLES1Q8TDN4 633 aa21.2■□□□□ 0.99
HLA-A-208ENST00000496081 AXIN2Q9Y2T1 843 aa21.2■□□□□ 0.99
HLA-A-208ENST00000496081 LAS1LQ9Y4W2 734 aaKnown RBP21.2■□□□□ 0.99
HLA-A-208ENST00000496081 CRBNQ96SW2 442 aa21.19■□□□□ 0.98
HLA-A-208ENST00000496081 RGPD5Q99666 1765 aa21.19■□□□□ 0.98
HLA-A-208ENST00000496081 GAS2L2Q8NHY3 880 aa21.18■□□□□ 0.98
HLA-A-208ENST00000496081 ANKRD24Q8TF21 1146 aa21.18■□□□□ 0.98
HLA-A-208ENST00000496081 CFAP44Q96MT7 982 aa21.18■□□□□ 0.98
HLA-A-208ENST00000496081 LRRC59Q96AG4 307 aaKnown RBP21.18■□□□□ 0.98
HLA-A-208ENST00000496081 MCM10Q7L590 875 aa21.17■□□□□ 0.98
HLA-A-208ENST00000496081 MBIPQ9NS73 344 aa21.17■□□□□ 0.98
HLA-A-208ENST00000496081 NHSL1Q5SYE7 1610 aa21.16■□□□□ 0.98
HLA-A-208ENST00000496081 COL18A1P39060 1754 aa21.15■□□□□ 0.98
HLA-A-208ENST00000496081 NCAPD2Q15021 1401 aa21.15■□□□□ 0.98
HLA-A-208ENST00000496081 PELP1Q8IZL8 1130 aaKnown RBP21.15■□□□□ 0.98
HLA-A-208ENST00000496081 CCDC136Q96JN2 1154 aa21.15■□□□□ 0.98
HLA-A-208ENST00000496081 BCL2L13Q9BXK5 485 aa21.15■□□□□ 0.98
HLA-A-208ENST00000496081 CAMTA1Q9Y6Y1 1673 aa21.14■□□□□ 0.97
HLA-A-208ENST00000496081 ERBB3P21860 1342 aa21.14■□□□□ 0.97
HLA-A-208ENST00000496081 RTF1Q92541 710 aaKnown RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms