RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 AATKQ6ZMQ8 1374 aa14.3□□□□□ -0.12
ECHDC3-204ENST00000495787 KRT28Q7Z3Y7 464 aa14.29□□□□□ -0.12
ECHDC3-204ENST00000495787 CCDC9Q9Y3X0 531 aaKnown RBP14.29□□□□□ -0.12
ECHDC3-204ENST00000495787 OVOS2A0A0J9YW53 1432 aa14.28□□□□□ -0.12
ECHDC3-204ENST00000495787 BAG6P46379 1132 aa14.28□□□□□ -0.12
ECHDC3-204ENST00000495787 TNS3Q68CZ2 1445 aa14.28□□□□□ -0.12
ECHDC3-204ENST00000495787 OVOS2Q6IE36 1432 aa14.28□□□□□ -0.12
ECHDC3-204ENST00000495787 USP31Q70CQ4 1352 aa14.28□□□□□ -0.12
ECHDC3-204ENST00000495787 USP54Q70EL1 1684 aa14.28□□□□□ -0.12
ECHDC3-204ENST00000495787 NWD2Q9ULI1 1742 aa14.28□□□□□ -0.12
ECHDC3-204ENST00000495787 COL3A1P02461 1466 aaPredicted RBP14.27□□□□□ -0.12
ECHDC3-204ENST00000495787 SMG6Q86US8 1419 aaKnown RBP14.27□□□□□ -0.12
ECHDC3-204ENST00000495787 PSDA5PKW4 1024 aaPredicted RBP14.27□□□□□ -0.13
ECHDC3-204ENST00000495787 PSME1Q06323 249 aa14.27□□□□□ -0.13
ECHDC3-204ENST00000495787 POLKQ9UBT6 870 aa14.26□□□□□ -0.13
ECHDC3-204ENST00000495787 PIK3C2AO00443 1686 aa14.26□□□□□ -0.13
ECHDC3-204ENST00000495787 PLCH1Q4KWH8 1693 aa14.26□□□□□ -0.13
ECHDC3-204ENST00000495787 SBNO1A3KN83 1393 aa14.25□□□□□ -0.13
ECHDC3-204ENST00000495787 A0A0G2JS52 829 aa14.25□□□□□ -0.13
ECHDC3-204ENST00000495787 MYT1Q01538 1121 aa14.25□□□□□ -0.13
ECHDC3-204ENST00000495787 CABLES1Q8TDN4 633 aa14.25□□□□□ -0.13
ECHDC3-204ENST00000495787 NUDCQ9Y266 331 aa14.25□□□□□ -0.13
ECHDC3-204ENST00000495787 ARHGEF10O15013 1369 aa14.24□□□□□ -0.13
ECHDC3-204ENST00000495787 LMOD2Q6P5Q4 547 aa14.23□□□□□ -0.13
ECHDC3-204ENST00000495787 DIAPH1O60610 1272 aaKnown RBP14.22□□□□□ -0.13
ECHDC3-204ENST00000495787 PLEKHG5O94827 1062 aa14.22□□□□□ -0.13
ECHDC3-204ENST00000495787 ABCA3Q99758 1704 aa14.21□□□□□ -0.13
ECHDC3-204ENST00000495787 FAM83GA6ND36 823 aa14.21□□□□□ -0.13
ECHDC3-204ENST00000495787 FBLN1P23142 703 aa14.21□□□□□ -0.13
ECHDC3-204ENST00000495787 PDE3BQ13370 1112 aa14.21□□□□□ -0.13
ECHDC3-204ENST00000495787 FAM98CQ17RN3 349 aaKnown RBP14.21□□□□□ -0.13
ECHDC3-204ENST00000495787 NGEFQ8N5V2 710 aa14.21□□□□□ -0.13
ECHDC3-204ENST00000495787 EMILIN1Q9Y6C2 1016 aa14.21□□□□□ -0.13
ECHDC3-204ENST00000495787 TRPM3Q9HCF6 1732 aaPredicted RBP14.21□□□□□ -0.14
ECHDC3-204ENST00000495787 NLRP6P59044 892 aa14.2□□□□□ -0.14
ECHDC3-204ENST00000495787 EN1Q05925 392 aaPredicted RBP14.2□□□□□ -0.14
ECHDC3-204ENST00000495787 CCDC146Q8IYE0 955 aa14.2□□□□□ -0.14
ECHDC3-204ENST00000495787 ABTB2Q8N961 1025 aa14.2□□□□□ -0.14
ECHDC3-204ENST00000495787 RUNDC1Q96C34 613 aa14.2□□□□□ -0.14
ECHDC3-204ENST00000495787 RGPD1P0DJD0 1748 aa14.19□□□□□ -0.14
ECHDC3-204ENST00000495787 PPM1GO15355 546 aaPredicted RBP14.19□□□□□ -0.14
ECHDC3-204ENST00000495787 PAK3O75914 559 aaPredicted RBP14.19□□□□□ -0.14
ECHDC3-204ENST00000495787 U2AF1L5P0DN76 240 aaPredicted RBP14.19□□□□□ -0.14
ECHDC3-204ENST00000495787 U2AF1Q01081 240 aaKnown RBP eCLIP14.19□□□□□ -0.14
ECHDC3-204ENST00000495787 RRS1Q15050 365 aaKnown RBP14.19□□□□□ -0.14
ECHDC3-204ENST00000495787 NRAPQ86VF7 1730 aa14.18□□□□□ -0.14
ECHDC3-204ENST00000495787 DISP2A7MBM2 1401 aa14.18□□□□□ -0.14
ECHDC3-204ENST00000495787 SENP3-EIF4A1A0A087X0R7 540 aa14.18□□□□□ -0.14
ECHDC3-204ENST00000495787 R3HDM1Q15032 1099 aaKnown RBP14.18□□□□□ -0.14
ECHDC3-204ENST00000495787 BTG4Q9NY30 223 aa14.18□□□□□ -0.14
ECHDC3-204ENST00000495787 PEAK1Q9H792 1746 aa14.18□□□□□ -0.14
ECHDC3-204ENST00000495787 APAF1O14727 1248 aa14.17□□□□□ -0.14
ECHDC3-204ENST00000495787 U2SURPO15042 1029 aaKnown RBP14.17□□□□□ -0.14
ECHDC3-204ENST00000495787 PNNQ9H307 717 aaKnown RBP14.17□□□□□ -0.14
ECHDC3-204ENST00000495787 SALL2Q9Y467 1007 aaPredicted RBP14.17□□□□□ -0.14
ECHDC3-204ENST00000495787 GTF3C3Q9Y5Q9 886 aa14.17□□□□□ -0.14
ECHDC3-204ENST00000495787 IL13P35225 146 aa14.16□□□□□ -0.14
ECHDC3-204ENST00000495787 NCBP3Q53F19 620 aaKnown RBP14.16□□□□□ -0.14
ECHDC3-204ENST00000495787 KIF24Q5T7B8 1368 aa14.16□□□□□ -0.14
ECHDC3-204ENST00000495787 COL14A1Q05707 1796 aaKnown RBP14.16□□□□□ -0.14
ECHDC3-204ENST00000495787 ALS2Q96Q42 1657 aa14.15□□□□□ -0.14
ECHDC3-204ENST00000495787 MAP3K19Q56UN5 1328 aa14.15□□□□□ -0.15
ECHDC3-204ENST00000495787 SPATA31A5Q5VU36 1347 aa14.15□□□□□ -0.15
ECHDC3-204ENST00000495787 SPATA31A7Q8IWB4 1347 aa14.15□□□□□ -0.15
ECHDC3-204ENST00000495787 ZNF521Q96K83 1311 aa14.15□□□□□ -0.15
ECHDC3-204ENST00000495787 FCHSD2O94868 740 aa14.14□□□□□ -0.15
ECHDC3-204ENST00000495787 FAM182BQ5T319 152 aa14.14□□□□□ -0.15
ECHDC3-204ENST00000495787 NUTM2GQ5VZR2 741 aa14.14□□□□□ -0.15
ECHDC3-204ENST00000495787 FLT4P35916 1363 aa14.13□□□□□ -0.15
ECHDC3-204ENST00000495787 SOX12O15370 315 aa14.13□□□□□ -0.15
ECHDC3-204ENST00000495787 TCP11L2Q8N4U5 519 aa14.13□□□□□ -0.15
ECHDC3-204ENST00000495787 PLEKHF1Q96S99 279 aa14.13□□□□□ -0.15
ECHDC3-204ENST00000495787 SLIT3O75094 1523 aa14.13□□□□□ -0.15
ECHDC3-204ENST00000495787 LTN1O94822 1766 aa14.13□□□□□ -0.15
ECHDC3-204ENST00000495787 THSD7AQ9UPZ6 1657 aa14.13□□□□□ -0.15
ECHDC3-204ENST00000495787 TNS1Q9HBL0 1735 aaKnown RBP14.12□□□□□ -0.15
ECHDC3-204ENST00000495787 NFAT5O94916 1531 aa14.12□□□□□ -0.15
ECHDC3-204ENST00000495787 EZH2Q15910 746 aaKnown RBP14.12□□□□□ -0.15
ECHDC3-204ENST00000495787 KCNH5Q8NCM2 988 aa14.12□□□□□ -0.15
ECHDC3-204ENST00000495787 RTL1A6NKG5 1358 aa14.11□□□□□ -0.15
ECHDC3-204ENST00000495787 AMPHP49418 695 aa14.11□□□□□ -0.15
ECHDC3-204ENST00000495787 GOLGA2Q08379 1002 aa14.11□□□□□ -0.15
ECHDC3-204ENST00000495787 EIF4A2Q14240 407 aaKnown RBP14.11□□□□□ -0.15
ECHDC3-204ENST00000495787 CCDC27Q2M243 656 aa14.11□□□□□ -0.15
ECHDC3-204ENST00000495787 RSPH6AQ9H0K4 717 aa14.11□□□□□ -0.15
ECHDC3-204ENST00000495787 PHRF1Q9P1Y6 1649 aaKnown RBP14.11□□□□□ -0.15
ECHDC3-204ENST00000495787 USP19O94966 1318 aa14.11□□□□□ -0.15
ECHDC3-204ENST00000495787 MAPK8IP3Q9UPT6 1336 aa14.11□□□□□ -0.15
ECHDC3-204ENST00000495787 HSP90AB2PQ58FF8 381 aa14.1□□□□□ -0.15
ECHDC3-204ENST00000495787 FAM196AQ6ZSG2 479 aa14.1□□□□□ -0.15
ECHDC3-204ENST00000495787 CDCA7LQ96GN5 454 aa14.1□□□□□ -0.15
ECHDC3-204ENST00000495787 CAMKK2Q96RR4 588 aa14.1□□□□□ -0.15
ECHDC3-204ENST00000495787 PRDM11Q9NQV5 511 aa14.1□□□□□ -0.15
ECHDC3-204ENST00000495787 TRIM37O94972 964 aa14.09□□□□□ -0.15
ECHDC3-204ENST00000495787 NEFMP07197 916 aa14.09□□□□□ -0.15
ECHDC3-204ENST00000495787 YY1P25490 414 aa14.09□□□□□ -0.15
ECHDC3-204ENST00000495787 SUPT16HQ9Y5B9 1047 aaKnown RBP14.09□□□□□ -0.15
ECHDC3-204ENST00000495787 HOXC9P31274 260 aa14.08□□□□□ -0.16
ECHDC3-204ENST00000495787 PRKAR2BP31323 418 aa14.08□□□□□ -0.16
ECHDC3-204ENST00000495787 WWC1Q8IX03 1113 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms