RNA–Protein interactions for RNA: ENST00000495720.5

RAB13-204, Transcript of RAB13, member RAS oncogene family, human

TSL 5

Gene RAB13, Length 868 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB13-204	ENST00000495720	MAPK8IP3	Q9UPT6	1336 aa		13.85	□□□□□ -0.19
RAB13-204	ENST00000495720	SBNO1	A3KN83	1393 aa		13.84	□□□□□ -0.19
RAB13-204	ENST00000495720	DCC	P43146	1447 aa		13.84	□□□□□ -0.19
RAB13-204	ENST00000495720	SOX12	O15370	315 aa		13.84	□□□□□ -0.19
RAB13-204	ENST00000495720	ATF3	P18847	181 aa		13.84	□□□□□ -0.19
RAB13-204	ENST00000495720	RIPK4	P57078	832 aa		13.84	□□□□□ -0.19
RAB13-204	ENST00000495720	KRT28	Q7Z3Y7	464 aa		13.84	□□□□□ -0.19
RAB13-204	ENST00000495720	XIRP1	Q702N8	1843 aa	Known RBP	13.84	□□□□□ -0.19
RAB13-204	ENST00000495720	NFE2L2	Q16236	605 aa		13.83	□□□□□ -0.2
RAB13-204	ENST00000495720	RGPD1	P0DJD0	1748 aa		13.83	□□□□□ -0.2
RAB13-204	ENST00000495720	FLT4	P35916	1363 aa		13.83	□□□□□ -0.2
RAB13-204	ENST00000495720	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.82	□□□□□ -0.2
RAB13-204	ENST00000495720	KIF24	Q5T7B8	1368 aa		13.82	□□□□□ -0.2
RAB13-204	ENST00000495720	KIF1A	Q12756	1690 aa		13.82	□□□□□ -0.2
RAB13-204	ENST00000495720	HOXC9	P31274	260 aa		13.81	□□□□□ -0.2
RAB13-204	ENST00000495720	AMPH	P49418	695 aa		13.81	□□□□□ -0.2
RAB13-204	ENST00000495720	XPC	Q01831	940 aa	Predicted RBP	13.81	□□□□□ -0.2
RAB13-204	ENST00000495720	CADPS2	Q86UW7	1296 aa		13.81	□□□□□ -0.2
RAB13-204	ENST00000495720	AEBP1	Q8IUX7	1158 aa		13.81	□□□□□ -0.2
RAB13-204	ENST00000495720	IL16	Q14005	1332 aa		13.81	□□□□□ -0.2
RAB13-204	ENST00000495720	PLIN1	O60240	522 aa		13.8	□□□□□ -0.2
RAB13-204	ENST00000495720	SULT6B1	Q6IMI4	303 aa		13.8	□□□□□ -0.2
RAB13-204	ENST00000495720	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.8	□□□□□ -0.2
RAB13-204	ENST00000495720	NFAT5	O94916	1531 aa		13.8	□□□□□ -0.2
RAB13-204	ENST00000495720	IP6K1	Q92551	441 aa		13.79	□□□□□ -0.2
RAB13-204	ENST00000495720	EYA1	Q99502	592 aa		13.79	□□□□□ -0.2
RAB13-204	ENST00000495720	EXOC6	Q8TAG9	804 aa		13.78	□□□□□ -0.2
RAB13-204	ENST00000495720	ARHGEF10	O15013	1369 aa		13.78	□□□□□ -0.2
RAB13-204	ENST00000495720	MSH6	P52701	1360 aa		13.78	□□□□□ -0.2
RAB13-204	ENST00000495720	SLIT3	O75094	1523 aa		13.78	□□□□□ -0.2
RAB13-204	ENST00000495720	USP19	O94966	1318 aa		13.77	□□□□□ -0.21
RAB13-204	ENST00000495720	NEFM	P07197	916 aa		13.77	□□□□□ -0.21
RAB13-204	ENST00000495720	IGSF1	Q8N6C5	1336 aa		13.77	□□□□□ -0.21
RAB13-204	ENST00000495720	KCNH5	Q8NCM2	988 aa		13.77	□□□□□ -0.21
RAB13-204	ENST00000495720	DDX17	Q92841	729 aa	Known RBP	13.77	□□□□□ -0.21
RAB13-204	ENST00000495720	MYH16	Q9H6N6	1097 aa		13.77	□□□□□ -0.21
RAB13-204	ENST00000495720	DLG5	Q8TDM6	1919 aa		13.76	□□□□□ -0.21
RAB13-204	ENST00000495720	ALS2	Q96Q42	1657 aa		13.76	□□□□□ -0.21
RAB13-204	ENST00000495720	RTL1	A6NKG5	1358 aa		13.76	□□□□□ -0.21
RAB13-204	ENST00000495720	BCAR3	O75815	825 aa		13.76	□□□□□ -0.21
RAB13-204	ENST00000495720	GC	P02774	474 aa		13.76	□□□□□ -0.21
RAB13-204	ENST00000495720	ARHGEF25	Q86VW2	580 aa		13.76	□□□□□ -0.21
RAB13-204	ENST00000495720	KDR	P35968	1356 aa		13.75	□□□□□ -0.21
RAB13-204	ENST00000495720	FANCI	Q9NVI1	1328 aa		13.75	□□□□□ -0.21
RAB13-204	ENST00000495720	ZNF853	P0CG23	659 aa		13.75	□□□□□ -0.21
RAB13-204	ENST00000495720	RARS	P54136	660 aa	Known RBP	13.75	□□□□□ -0.21
RAB13-204	ENST00000495720	C20orf194	Q5TEA3	1177 aa		13.75	□□□□□ -0.21
RAB13-204	ENST00000495720	TSR2	Q969E8	191 aa	Known RBP	13.75	□□□□□ -0.21
RAB13-204	ENST00000495720	LTN1	O94822	1766 aa		13.75	□□□□□ -0.21
RAB13-204	ENST00000495720	EXOSC9	Q06265	439 aa	Known RBP	13.74	□□□□□ -0.21
RAB13-204	ENST00000495720	B4GALNT3	Q6L9W6	998 aa		13.74	□□□□□ -0.21
RAB13-204	ENST00000495720	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.74	□□□□□ -0.21
RAB13-204	ENST00000495720	BRINP3	Q76B58	766 aa		13.73	□□□□□ -0.21
RAB13-204	ENST00000495720	CRBN	Q96SW2	442 aa		13.73	□□□□□ -0.21
RAB13-204	ENST00000495720	THUMPD2	Q9BTF0	503 aa	Known RBP	13.73	□□□□□ -0.21
RAB13-204	ENST00000495720	NPHP3	Q7Z494	1330 aa		13.72	□□□□□ -0.21
RAB13-204	ENST00000495720	CT47B1	P0C2W7	299 aa	Predicted RBP	13.72	□□□□□ -0.21
RAB13-204	ENST00000495720	LMOD3	Q0VAK6	560 aa		13.72	□□□□□ -0.21
RAB13-204	ENST00000495720	LMOD2	Q6P5Q4	547 aa		13.72	□□□□□ -0.21
RAB13-204	ENST00000495720	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.72	□□□□□ -0.21
RAB13-204	ENST00000495720	SLAIN2	Q9P270	581 aa		13.72	□□□□□ -0.21
RAB13-204	ENST00000495720	PXDN	Q92626	1479 aa		13.72	□□□□□ -0.21
RAB13-204	ENST00000495720	MED1	Q15648	1581 aa	Predicted RBP	13.71	□□□□□ -0.21
RAB13-204	ENST00000495720	FAM83G	A6ND36	823 aa		13.71	□□□□□ -0.21
RAB13-204	ENST00000495720	MTHFSD	Q2M296	383 aa	Known RBP	13.71	□□□□□ -0.21
RAB13-204	ENST00000495720	LTV1	Q96GA3	475 aa	Predicted RBP	13.71	□□□□□ -0.21
RAB13-204	ENST00000495720	IFT57	Q9NWB7	429 aa		13.71	□□□□□ -0.21
RAB13-204	ENST00000495720	SPATA31A3	Q5VYP0	1347 aa		13.7	□□□□□ -0.22
RAB13-204	ENST00000495720	GNAI1	P63096	354 aa		13.7	□□□□□ -0.22
RAB13-204	ENST00000495720	CALD1	Q05682	793 aa	Known RBP	13.7	□□□□□ -0.22
RAB13-204	ENST00000495720	DCTN1	Q14203	1278 aa		13.7	□□□□□ -0.22
RAB13-204	ENST00000495720	NBPF6	Q5VWK0	638 aa		13.7	□□□□□ -0.22
RAB13-204	ENST00000495720	NBPF4	Q96M43	638 aa		13.7	□□□□□ -0.22
RAB13-204	ENST00000495720	POTED	Q86YR6	584 aa		13.69	□□□□□ -0.22
RAB13-204	ENST00000495720	TNS3	Q68CZ2	1445 aa		13.68	□□□□□ -0.22
RAB13-204	ENST00000495720	CERK	Q8TCT0	537 aa		13.68	□□□□□ -0.22
RAB13-204	ENST00000495720	CFAP44	Q96MT7	982 aa		13.68	□□□□□ -0.22
RAB13-204	ENST00000495720	AXIN2	Q9Y2T1	843 aa		13.68	□□□□□ -0.22
RAB13-204	ENST00000495720	SOS2	Q07890	1332 aa	Predicted RBP	13.67	□□□□□ -0.22
RAB13-204	ENST00000495720	ZBTB7C	A1YPR0	619 aa		13.67	□□□□□ -0.22
RAB13-204	ENST00000495720	PLEKHG5	O94827	1062 aa		13.67	□□□□□ -0.22
RAB13-204	ENST00000495720	PDE3A	Q14432	1141 aa		13.67	□□□□□ -0.22
RAB13-204	ENST00000495720	USHBP1	Q8N6Y0	703 aa		13.67	□□□□□ -0.22
RAB13-204	ENST00000495720	CCDC136	Q96JN2	1154 aa		13.67	□□□□□ -0.22
RAB13-204	ENST00000495720	MBIP	Q9NS73	344 aa		13.67	□□□□□ -0.22
RAB13-204	ENST00000495720	LAS1L	Q9Y4W2	734 aa	Known RBP	13.67	□□□□□ -0.22
RAB13-204	ENST00000495720	RGPD2	P0DJD1	1756 aa		13.67	□□□□□ -0.22
RAB13-204	ENST00000495720	CRB1	P82279	1406 aa		13.66	□□□□□ -0.22
RAB13-204	ENST00000495720	NCAPD2	Q15021	1401 aa		13.66	□□□□□ -0.22
RAB13-204	ENST00000495720	CHL1	O00533	1208 aa		13.66	□□□□□ -0.22
RAB13-204	ENST00000495720	HTATSF1	O43719	755 aa	Known RBP	13.66	□□□□□ -0.22
RAB13-204	ENST00000495720	VAMP4	O75379	141 aa		13.66	□□□□□ -0.22
RAB13-204	ENST00000495720	ZC3H6	P61129	1189 aa	Known RBP	13.66	□□□□□ -0.22
RAB13-204	ENST00000495720	GAS2L2	Q8NHY3	880 aa		13.66	□□□□□ -0.22
RAB13-204	ENST00000495720	LRRC59	Q96AG4	307 aa	Known RBP	13.66	□□□□□ -0.22
RAB13-204	ENST00000495720	COL18A1	P39060	1754 aa		13.66	□□□□□ -0.22
RAB13-204	ENST00000495720	CRYBG1	Q9Y4K1	1723 aa		13.65	□□□□□ -0.22
RAB13-204	ENST00000495720	MCM10	Q7L590	875 aa		13.65	□□□□□ -0.22
RAB13-204	ENST00000495720	CABLES1	Q8TDN4	633 aa		13.65	□□□□□ -0.22
RAB13-204	ENST00000495720	ANKRD24	Q8TF21	1146 aa		13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms