RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 FSHRP23945 695 aa11.16□□□□□ -0.62
NCKAP1-208ENST00000495619 SMCPP49901 116 aaPredicted RBP11.16□□□□□ -0.62
NCKAP1-208ENST00000495619 EIF4G2P78344 907 aaKnown RBP eCLIP11.16□□□□□ -0.62
NCKAP1-208ENST00000495619 CRIPAKQ8N1N5 446 aa11.16□□□□□ -0.62
NCKAP1-208ENST00000495619 OCSTAMPQ9BR26 566 aa11.16□□□□□ -0.62
NCKAP1-208ENST00000495619 GRM5P41594 1212 aa11.15□□□□□ -0.62
NCKAP1-208ENST00000495619 CAPN5O15484 640 aaPredicted RBP11.14□□□□□ -0.63
NCKAP1-208ENST00000495619 CCDC125Q86Z20 511 aa11.14□□□□□ -0.63
NCKAP1-208ENST00000495619 CCDC116Q8IYX3 515 aa11.13□□□□□ -0.63
NCKAP1-208ENST00000495619 PGPEP1Q9NXJ5 209 aa11.13□□□□□ -0.63
NCKAP1-208ENST00000495619 EMILIN1Q9Y6C2 1016 aa11.13□□□□□ -0.63
NCKAP1-208ENST00000495619 WDR4P57081 412 aaKnown RBP11.12□□□□□ -0.63
NCKAP1-208ENST00000495619 RNF20Q5VTR2 975 aa11.12□□□□□ -0.63
NCKAP1-208ENST00000495619 AAASQ9NRG9 546 aa11.12□□□□□ -0.63
NCKAP1-208ENST00000495619 COG6Q9Y2V7 657 aa11.12□□□□□ -0.63
NCKAP1-208ENST00000495619 SEPT12Q8IYM1 358 aa11.11□□□□□ -0.63
NCKAP1-208ENST00000495619 GPR37L1O60883 481 aa11.09□□□□□ -0.63
NCKAP1-208ENST00000495619 SOX11P35716 441 aa11.09□□□□□ -0.63
NCKAP1-208ENST00000495619 IRF5Q13568 498 aa11.09□□□□□ -0.63
NCKAP1-208ENST00000495619 ST8SIA5O15466 376 aa11.08□□□□□ -0.64
NCKAP1-208ENST00000495619 ZIC2O95409 532 aaPredicted RBP11.08□□□□□ -0.64
NCKAP1-208ENST00000495619 NR3C2P08235 984 aa11.08□□□□□ -0.64
NCKAP1-208ENST00000495619 UPP2O95045 317 aa11.07□□□□□ -0.64
NCKAP1-208ENST00000495619 RAB15P59190 212 aa11.07□□□□□ -0.64
NCKAP1-208ENST00000495619 SEMA3FQ13275 785 aa11.07□□□□□ -0.64
NCKAP1-208ENST00000495619 INTS6LQ5JSJ4 861 aaKnown RBP11.07□□□□□ -0.64
NCKAP1-208ENST00000495619 TIMP2P16035 220 aa11.06□□□□□ -0.64
NCKAP1-208ENST00000495619 VAC14Q08AM6 782 aa11.06□□□□□ -0.64
NCKAP1-208ENST00000495619 PPP1R26Q5T8A7 1209 aaPredicted RBP11.06□□□□□ -0.64
NCKAP1-208ENST00000495619 ESPNB1AK53 854 aa11.05□□□□□ -0.64
NCKAP1-208ENST00000495619 ESF1Q9H501 851 aaKnown RBP11.05□□□□□ -0.64
NCKAP1-208ENST00000495619 SENP2Q9HC62 589 aa11.05□□□□□ -0.64
NCKAP1-208ENST00000495619 GIGYF1O75420 1035 aaPredicted RBP11.04□□□□□ -0.64
NCKAP1-208ENST00000495619 SCARF1Q14162 830 aa11.04□□□□□ -0.64
NCKAP1-208ENST00000495619 ITPKCQ96DU7 683 aa11.04□□□□□ -0.64
NCKAP1-208ENST00000495619 POM121Q96HA1 1249 aa11.04□□□□□ -0.64
NCKAP1-208ENST00000495619 KLF16Q9BXK1 252 aaPredicted RBP11.03□□□□□ -0.64
NCKAP1-208ENST00000495619 ATP13A2Q9NQ11 1180 aa11.03□□□□□ -0.64
NCKAP1-208ENST00000495619 GTF3C3Q9Y5Q9 886 aa11.03□□□□□ -0.64
NCKAP1-208ENST00000495619 SLFNL1Q499Z3 407 aa11.02□□□□□ -0.65
NCKAP1-208ENST00000495619 ZFAND3Q9H8U3 227 aa11.02□□□□□ -0.65
NCKAP1-208ENST00000495619 CEP126Q9P2H0 1117 aa11.02□□□□□ -0.65
NCKAP1-208ENST00000495619 ERVH48-1M5A8F1 160 aa11.01□□□□□ -0.65
NCKAP1-208ENST00000495619 LCE2BO14633 110 aa11.01□□□□□ -0.65
NCKAP1-208ENST00000495619 KIFC2Q96AC6 838 aa11.01□□□□□ -0.65
NCKAP1-208ENST00000495619 ZNF787Q6DD87 383 aa11□□□□□ -0.65
NCKAP1-208ENST00000495619 MRPL14Q6P1L8 145 aaKnown RBP10.99□□□□□ -0.65
NCKAP1-208ENST00000495619 PROSER2Q86WR7 435 aaPredicted RBP10.99□□□□□ -0.65
NCKAP1-208ENST00000495619 TSEN34Q9BSV6 310 aaKnown RBP10.99□□□□□ -0.65
NCKAP1-208ENST00000495619 A6NJR5 290 aa10.98□□□□□ -0.65
NCKAP1-208ENST00000495619 CLUAP1Q96AJ1 413 aa10.98□□□□□ -0.65
NCKAP1-208ENST00000495619 C11orf95C9JLR9 678 aaPredicted RBP10.97□□□□□ -0.65
NCKAP1-208ENST00000495619 MEIOBQ8N635 442 aa10.97□□□□□ -0.65
NCKAP1-208ENST00000495619 ZNF784Q8NCA9 323 aaPredicted RBP10.97□□□□□ -0.65
NCKAP1-208ENST00000495619 DACH1Q9UI36 760 aa10.97□□□□□ -0.65
NCKAP1-208ENST00000495619 PCDHB11Q9Y5F2 797 aa10.97□□□□□ -0.65
NCKAP1-208ENST00000495619 BMP1P13497 986 aa10.96□□□□□ -0.65
NCKAP1-208ENST00000495619 RNF135Q8IUD6 432 aa10.96□□□□□ -0.65
NCKAP1-208ENST00000495619 TMPRSS4Q9NRS4 437 aa10.96□□□□□ -0.65
NCKAP1-208ENST00000495619 MYCP01106 439 aaPredicted RBP10.95□□□□□ -0.66
NCKAP1-208ENST00000495619 BMP2P12643 396 aa10.95□□□□□ -0.66
NCKAP1-208ENST00000495619 Q6ZVU0 165 aa10.95□□□□□ -0.66
NCKAP1-208ENST00000495619 GMPR2Q9P2T1 348 aaKnown RBP10.95□□□□□ -0.66
NCKAP1-208ENST00000495619 CC2D2BQ6DHV5 1058 aa10.94□□□□□ -0.66
NCKAP1-208ENST00000495619 LINC00528Q8N1L1 170 aa10.94□□□□□ -0.66
NCKAP1-208ENST00000495619 SIRT1Q96EB6 747 aa10.94□□□□□ -0.66
NCKAP1-208ENST00000495619 CBLBQ13191 982 aa10.93□□□□□ -0.66
NCKAP1-208ENST00000495619 TRIM46Q7Z4K8 759 aa10.93□□□□□ -0.66
NCKAP1-208ENST00000495619 TRIM47Q96LD4 638 aa10.93□□□□□ -0.66
NCKAP1-208ENST00000495619 PURBQ96QR8 312 aaKnown RBP10.93□□□□□ -0.66
NCKAP1-208ENST00000495619 CYLDQ9NQC7 956 aa10.93□□□□□ -0.66
NCKAP1-208ENST00000495619 DOLKQ9UPQ8 538 aa10.93□□□□□ -0.66
NCKAP1-208ENST00000495619 USP4Q13107 963 aa10.92□□□□□ -0.66
NCKAP1-208ENST00000495619 MAP7D1Q3KQU3 841 aa10.92□□□□□ -0.66
NCKAP1-208ENST00000495619 C6orf118Q5T5N4 469 aa10.92□□□□□ -0.66
NCKAP1-208ENST00000495619 ZFP42Q96MM3 310 aa10.92□□□□□ -0.66
NCKAP1-208ENST00000495619 ALG2Q9H553 416 aa10.92□□□□□ -0.66
NCKAP1-208ENST00000495619 ADH1AP07327 375 aa10.91□□□□□ -0.66
NCKAP1-208ENST00000495619 LILRA1O75019 489 aa10.9□□□□□ -0.66
NCKAP1-208ENST00000495619 ERVK-9P63128 1117 aa10.9□□□□□ -0.66
NCKAP1-208ENST00000495619 HDGFL1Q5TGJ6 251 aa10.9□□□□□ -0.66
NCKAP1-208ENST00000495619 CYP2U1Q7Z449 544 aa10.9□□□□□ -0.66
NCKAP1-208ENST00000495619 RELBQ01201 579 aa10.89□□□□□ -0.67
NCKAP1-208ENST00000495619 PHTF2Q8N3S3 785 aa10.89□□□□□ -0.67
NCKAP1-208ENST00000495619 FNBP4Q8N3X1 1017 aaPredicted RBP10.89□□□□□ -0.67
NCKAP1-208ENST00000495619 ATP5J2-PTCD1G3V325 749 aa10.88□□□□□ -0.67
NCKAP1-208ENST00000495619 NFATC2IPQ8NCF5 419 aa10.88□□□□□ -0.67
NCKAP1-208ENST00000495619 POM121CA8CG34 1229 aa10.87□□□□□ -0.67
NCKAP1-208ENST00000495619 LZTS3O60299 673 aaPredicted RBP10.87□□□□□ -0.67
NCKAP1-208ENST00000495619 CCDC85AQ96PX6 553 aaPredicted RBP10.87□□□□□ -0.67
NCKAP1-208ENST00000495619 POTECB2RU33 542 aa10.86□□□□□ -0.67
NCKAP1-208ENST00000495619 MAN1A2O60476 641 aa10.86□□□□□ -0.67
NCKAP1-208ENST00000495619 ADD1P35611 737 aaKnown RBP10.86□□□□□ -0.67
NCKAP1-208ENST00000495619 PTGIRP43119 386 aa10.86□□□□□ -0.67
NCKAP1-208ENST00000495619 OXLD1Q5BKU9 147 aa10.86□□□□□ -0.67
NCKAP1-208ENST00000495619 ERICH6Q7L0X2 663 aa10.86□□□□□ -0.67
NCKAP1-208ENST00000495619 PLPP7Q8NBV4 271 aa10.86□□□□□ -0.67
NCKAP1-208ENST00000495619 AGBL1Q96MI9 1066 aa10.86□□□□□ -0.67
NCKAP1-208ENST00000495619 ZMYND15Q9H091 742 aa10.86□□□□□ -0.67
NCKAP1-208ENST00000495619 SPINT1O43278 529 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms