RNA–Protein interactions for RNA: ENST00000495530.5

PTPRE-211, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-211ENST00000495530 MYT1Q01538 1121 aa19.79■□□□□ 0.76
PTPRE-211ENST00000495530 LMOD2Q6P5Q4 547 aa19.79■□□□□ 0.76
PTPRE-211ENST00000495530 USP31Q70CQ4 1352 aa19.79■□□□□ 0.76
PTPRE-211ENST00000495530 PARD3Q8TEW0 1356 aa19.79■□□□□ 0.76
PTPRE-211ENST00000495530 MIER1Q8N108 512 aa19.78■□□□□ 0.76
PTPRE-211ENST00000495530 SPATA31A3Q5VYP0 1347 aa19.76■□□□□ 0.75
PTPRE-211ENST00000495530 MYBBP1AQ9BQG0 1328 aaKnown RBP19.76■□□□□ 0.75
PTPRE-211ENST00000495530 NRKQ7Z2Y5 1582 aa19.75■□□□□ 0.75
PTPRE-211ENST00000495530 ARHGEF10O15013 1369 aa19.75■□□□□ 0.75
PTPRE-211ENST00000495530 PPP1R1BQ9UD71 204 aaPredicted RBP19.75■□□□□ 0.75
PTPRE-211ENST00000495530 CCER2I3L3R5 266 aa19.74■□□□□ 0.75
PTPRE-211ENST00000495530 EZH2Q15910 746 aaKnown RBP19.74■□□□□ 0.75
PTPRE-211ENST00000495530 ZNF784Q8NCA9 323 aaPredicted RBP19.74■□□□□ 0.75
PTPRE-211ENST00000495530 CAMTA1Q9Y6Y1 1673 aa19.73■□□□□ 0.75
PTPRE-211ENST00000495530 TNNT2P45379 298 aaPredicted RBP19.73■□□□□ 0.75
PTPRE-211ENST00000495530 HAP1P54257 671 aaPredicted RBP19.73■□□□□ 0.75
PTPRE-211ENST00000495530 NUTM2GQ5VZR2 741 aa19.73■□□□□ 0.75
PTPRE-211ENST00000495530 KCNH5Q8NCM2 988 aa19.73■□□□□ 0.75
PTPRE-211ENST00000495530 UTRNP46939 3433 aa19.73■□□□□ 0.75
PTPRE-211ENST00000495530 TNS3Q68CZ2 1445 aa19.73■□□□□ 0.75
PTPRE-211ENST00000495530 KIF20BQ96Q89 1820 aa19.72■□□□□ 0.75
PTPRE-211ENST00000495530 PPP2R1AP30153 589 aa19.72■□□□□ 0.75
PTPRE-211ENST00000495530 CHD4Q14839 1912 aa19.72■□□□□ 0.75
PTPRE-211ENST00000495530 RREB1Q92766 1687 aa19.71■□□□□ 0.75
PTPRE-211ENST00000495530 ABCA3Q99758 1704 aa19.71■□□□□ 0.75
PTPRE-211ENST00000495530 NRAPQ86VF7 1730 aa19.71■□□□□ 0.75
PTPRE-211ENST00000495530 TRPM3Q9HCF6 1732 aaPredicted RBP19.71■□□□□ 0.75
PTPRE-211ENST00000495530 OVOS2A0A0J9YW53 1432 aa19.7■□□□□ 0.74
PTPRE-211ENST00000495530 OVOS2Q6IE36 1432 aa19.7■□□□□ 0.74
PTPRE-211ENST00000495530 C1QTNF8P60827 252 aa19.7■□□□□ 0.74
PTPRE-211ENST00000495530 FAM98CQ17RN3 349 aaKnown RBP19.7■□□□□ 0.74
PTPRE-211ENST00000495530 AATKQ6ZMQ8 1374 aa19.7■□□□□ 0.74
PTPRE-211ENST00000495530 NUP188Q5SRE5 1749 aa19.69■□□□□ 0.74
PTPRE-211ENST00000495530 CAMKK2Q96RR4 588 aa19.69■□□□□ 0.74
PTPRE-211ENST00000495530 SPON1Q9HCB6 807 aa19.69■□□□□ 0.74
PTPRE-211ENST00000495530 PIK3C2AO00443 1686 aa19.68■□□□□ 0.74
PTPRE-211ENST00000495530 ANKRD26Q9UPS8 1709 aa19.68■□□□□ 0.74
PTPRE-211ENST00000495530 GCP02774 474 aa19.67■□□□□ 0.74
PTPRE-211ENST00000495530 USP19O94966 1318 aa19.67■□□□□ 0.74
PTPRE-211ENST00000495530 MTHFSP49914 203 aa19.66■□□□□ 0.74
PTPRE-211ENST00000495530 FAM182BQ5T319 152 aa19.66■□□□□ 0.74
PTPRE-211ENST00000495530 CFAP53Q96M91 514 aa19.66■□□□□ 0.74
PTPRE-211ENST00000495530 ALS2Q96Q42 1657 aa19.65■□□□□ 0.74
PTPRE-211ENST00000495530 POLKQ9UBT6 870 aa19.65■□□□□ 0.74
PTPRE-211ENST00000495530 CEP350Q5VT06 3117 aa19.65■□□□□ 0.74
PTPRE-211ENST00000495530 SOX12O15370 315 aa19.64■□□□□ 0.73
PTPRE-211ENST00000495530 KCNQ2O43526 872 aa19.64■□□□□ 0.73
PTPRE-211ENST00000495530 NBPF14Q5TI25 921 aa19.64■□□□□ 0.73
PTPRE-211ENST00000495530 MRS2Q9HD23 443 aa19.64■□□□□ 0.73
PTPRE-211ENST00000495530 THSD7AQ9UPZ6 1657 aa19.64■□□□□ 0.73
PTPRE-211ENST00000495530 USP54Q70EL1 1684 aa19.63■□□□□ 0.73
PTPRE-211ENST00000495530 PPM1GO15355 546 aaPredicted RBP19.62■□□□□ 0.73
PTPRE-211ENST00000495530 KIF24Q5T7B8 1368 aa19.61■□□□□ 0.73
PTPRE-211ENST00000495530 PLEKHG5O94827 1062 aa19.61■□□□□ 0.73
PTPRE-211ENST00000495530 FBLN1P23142 703 aa19.61■□□□□ 0.73
PTPRE-211ENST00000495530 AMPHP49418 695 aa19.61■□□□□ 0.73
PTPRE-211ENST00000495530 RRS1Q15050 365 aaKnown RBP19.61■□□□□ 0.73
PTPRE-211ENST00000495530 CABLES1Q8TDN4 633 aa19.61■□□□□ 0.73
PTPRE-211ENST00000495530 APBA3O96018 575 aa19.6■□□□□ 0.73
PTPRE-211ENST00000495530 SLIT3O75094 1523 aa19.6■□□□□ 0.73
PTPRE-211ENST00000495530 COL14A1Q05707 1796 aaKnown RBP19.6■□□□□ 0.73
PTPRE-211ENST00000495530 FAM83GA6ND36 823 aa19.59■□□□□ 0.73
PTPRE-211ENST00000495530 TRIM37O94972 964 aa19.59■□□□□ 0.73
PTPRE-211ENST00000495530 FAM196AQ6ZSG2 479 aa19.59■□□□□ 0.73
PTPRE-211ENST00000495530 ARHGEF25Q86VW2 580 aa19.59■□□□□ 0.73
PTPRE-211ENST00000495530 EMILIN1Q9Y6C2 1016 aa19.59■□□□□ 0.73
PTPRE-211ENST00000495530 MAP3K19Q56UN5 1328 aa19.58■□□□□ 0.73
PTPRE-211ENST00000495530 INSRP06213 1382 aa19.57■□□□□ 0.72
PTPRE-211ENST00000495530 ZC3H6P61129 1189 aaKnown RBP19.57■□□□□ 0.72
PTPRE-211ENST00000495530 NUDCQ9Y266 331 aa19.57■□□□□ 0.72
PTPRE-211ENST00000495530 MAP2P11137 1827 aaKnown RBP19.56■□□□□ 0.72
PTPRE-211ENST00000495530 CCDC184Q52MB2 194 aa19.56■□□□□ 0.72
PTPRE-211ENST00000495530 IP6K1Q92551 441 aa19.56■□□□□ 0.72
PTPRE-211ENST00000495530 BTG4Q9NY30 223 aa19.56■□□□□ 0.72
PTPRE-211ENST00000495530 SMG6Q86US8 1419 aaKnown RBP19.56■□□□□ 0.72
PTPRE-211ENST00000495530 FLT4P35916 1363 aa19.56■□□□□ 0.72
PTPRE-211ENST00000495530 SPATA31A5Q5VU36 1347 aa19.55■□□□□ 0.72
PTPRE-211ENST00000495530 SPATA31A7Q8IWB4 1347 aa19.55■□□□□ 0.72
PTPRE-211ENST00000495530 DIAPH1O60610 1272 aaKnown RBP19.55■□□□□ 0.72
PTPRE-211ENST00000495530 RTL1A6NKG5 1358 aa19.55■□□□□ 0.72
PTPRE-211ENST00000495530 CPDO75976 1380 aa19.55■□□□□ 0.72
PTPRE-211ENST00000495530 ZBTB7CA1YPR0 619 aa19.54■□□□□ 0.72
PTPRE-211ENST00000495530 HOXC9P31274 260 aa19.54■□□□□ 0.72
PTPRE-211ENST00000495530 PNISRQ8TF01 805 aaKnown RBP19.54■□□□□ 0.72
PTPRE-211ENST00000495530 NFAT5O94916 1531 aa19.54■□□□□ 0.72
PTPRE-211ENST00000495530 WDR43Q15061 677 aaKnown RBP eCLIP19.53■□□□□ 0.72
PTPRE-211ENST00000495530 PRDM11Q9NQV5 511 aa19.53■□□□□ 0.72
PTPRE-211ENST00000495530 HSP90AB2PQ58FF8 381 aa19.52■□□□□ 0.72
PTPRE-211ENST00000495530 KIAA0232Q92628 1395 aa19.5■□□□□ 0.71
PTPRE-211ENST00000495530 CRYBG1Q9Y4K1 1723 aa19.5■□□□□ 0.71
PTPRE-211ENST00000495530 CASZ1Q86V15 1759 aa19.49■□□□□ 0.71
PTPRE-211ENST00000495530 FAM9BQ8IZU0 186 aa19.49■□□□□ 0.71
PTPRE-211ENST00000495530 PHRF1Q9P1Y6 1649 aaKnown RBP19.49■□□□□ 0.71
PTPRE-211ENST00000495530 IL13P35225 146 aa19.48■□□□□ 0.71
PTPRE-211ENST00000495530 PNNQ9H307 717 aaKnown RBP19.48■□□□□ 0.71
PTPRE-211ENST00000495530 U2SURPO15042 1029 aaKnown RBP19.47■□□□□ 0.71
PTPRE-211ENST00000495530 EIF4A2Q14240 407 aaKnown RBP19.47■□□□□ 0.71
PTPRE-211ENST00000495530 GIGYF1O75420 1035 aaPredicted RBP19.46■□□□□ 0.71
PTPRE-211ENST00000495530 CHRNA2Q15822 529 aa19.46■□□□□ 0.71
PTPRE-211ENST00000495530 RGPD3A6NKT7 1758 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms